Guide to the Human Genome
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Name: TMEM121 Sequence: fasta or formatted (319aa) NCBI GI: 13376888
Description:

hole protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         29           2
 C cysteine            2.2          7           1
 D aspartate           4.1         13           1
 E glutamate           3.4         11           1
 F phenylalanine       4.4         14           2
 G glycine             4.7         15           1
 H histidine           1.3          4           1
 I isoleucine          3.1         10           2
 K lysine              2.8          9           1
 L leucine            15.4         49           3
 M methionine          4.1         13           2
 N asparagine          1.9          6           1
 P proline             9.4         30           6
 Q glutamine           2.8          9           1
 R arginine            7.8         25           2
 S serine              4.1         13           2
 T threonine           3.4         11           2
 V valine             11.0         35           2
 W tryptophan          1.6          5           1
 Y tyrosine            3.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hole protein 
WASL                  0.032   Wiskott-Aldrich syndrome gene-like protein 
BRD4                  0.029   bromodomain-containing protein 4 isoform long 
ZC3H4                 0.028   zinc finger CCCH-type containing 4 
ZNF341                0.028   zinc finger protein 341 
RAPH1                 0.024   Ras association and pleckstrin homology domains 1 is...
KIAA1949              0.024   phostensin 
KIAA1949              0.024   phostensin 
GLTSCR1               0.024   glioma tumor suppressor candidate region gene 1 [Ho...
DIAPH1                0.023   diaphanous 1 isoform 2 
DIAPH1                0.023   diaphanous 1 isoform 1 
FMN2                  0.023   formin 2 
MYST3                 0.023   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.023   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.023   MYST histone acetyltransferase (monocytic leukemia)...
FOXG1                 0.023   forkhead box G1 
SETD1B                0.023   SET domain containing 1B 
PRR12                 0.023   proline rich 12 
WASF2                 0.023   WAS protein family, member 2 
ZFHX4                 0.023   zinc finger homeodomain 4 
SF3A2                 0.023   splicing factor 3a, subunit 2 
FMNL1                 0.023   formin-like 1 
ENAH                  0.023   enabled homolog isoform a 
ENAH                  0.023   enabled homolog isoform b 
FMNL2                 0.023   formin-like 2 
HNRNPUL1              0.021   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.021   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
PCLO                  0.021   piccolo isoform 2 
PCLO                  0.021   piccolo isoform 1 
NCCRP1                0.021   non-specific cytotoxic cell receptor protein 1 homol...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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