ZC3HC1 34569

Name: ZC3HC1	Sequence: fasta or formatted (502aa)		NCBI GI: 66348045
Description: zinc finger, C3HC type 1		Referenced in: Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 34 2 C cysteine 4.0 20 1 D aspartate 5.6 28 1 E glutamate 7.6 38 2 F phenylalanine 4.0 20 2 G glycine 5.4 27 2 H histidine 1.4 7 1 I isoleucine 3.0 15 1 K lysine 5.0 25 2 L leucine 9.4 47 3 M methionine 2.2 11 2 N asparagine 0.8 4 1 P proline 7.8 39 1 Q glutamine 4.4 22 2 R arginine 6.2 31 2 S serine 13.3 67 5 T threonine 6.2 31 2 V valine 4.6 23 2 W tryptophan 2.2 11 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, C3HC type 1 SPEN 0.015 spen homolog, transcriptional regulator FOSL1 0.014 FOS-like antigen 1 ESX1 0.014 extraembryonic, spermatogenesis, homeobox 1-like [Ho... LOXL1 0.014 lysyl oxidase-like 1 preproprotein MUC17 0.013 mucin 17 SRRM2 0.013 splicing coactivator subunit SRm300 MDC1 0.013 mediator of DNA-damage checkpoint 1 SRRM1 0.013 serine/arginine repetitive matrix 1 LOC643376 0.012 hypothetical protein LOC643376 LOC100128719 0.012 PREDICTED: hypothetical protein, partial LOC100128719 0.012 PREDICTED: hypothetical protein, partial MUC12 0.012 PREDICTED: mucin 12 POLR2A 0.012 DNA-directed RNA polymerase II A TNK2 0.012 tyrosine kinase, non-receptor, 2 isoform 1 TNK2 0.012 tyrosine kinase, non-receptor, 2 isoform 2 UBN2 0.011 ubinuclein 2 DISP2 0.011 dispatched B LOC284297 0.010 hypothetical protein LOC284297 ZNF703 0.010 zinc finger protein 703 LOC100130360 0.010 PREDICTED: hypothetical protein ZRANB2 0.010 zinc finger protein 265 isoform 1 RASAL3 0.010 RAS protein activator like 3 FOXL1 0.010 forkhead box L1 MUC12 0.009 PREDICTED: mucin 12, cell surface associated RAPH1 0.009 Ras association and pleckstrin homology domains 1 is... SYNJ1 0.009 synaptojanin 1 isoform a SYNJ1 0.009 synaptojanin 1 isoform b ANKRD11 0.009 ankyrin repeat domain 11 ZRANB2 0.009 zinc finger protein 265 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.