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Search of human proteins with 66346681
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66346681 SERPINE1 mRNA binding protein 1 isoform 2 [Homo
sapiens]
(402 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66346681 SERPINE1 mRNA binding protein 1 isoform 2 [Homo sapi... 828 0.0
gi|66346679 SERPINE1 mRNA binding protein 1 isoform 1 [Homo sapi... 822 0.0
gi|66346685 SERPINE1 mRNA binding protein 1 isoform 4 [Homo sapi... 788 0.0
gi|66346683 SERPINE1 mRNA binding protein 1 isoform 3 [Homo sapi... 781 0.0
gi|157676331 hyaluronan binding protein 4 [Homo sapiens] 256 3e-68
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 55 1e-07
gi|62988361 absent in melanoma 1 [Homo sapiens] 44 2e-04
gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 42 8e-04
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 42 8e-04
gi|9966841 cell death regulator aven [Homo sapiens] 42 0.001
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 42 0.001
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 40 0.003
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 40 0.003
gi|166197712 LSM14 homolog A isoform a [Homo sapiens] 40 0.003
gi|166197710 LSM14 homolog A isoform b [Homo sapiens] 40 0.003
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 40 0.003
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 40 0.003
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 40 0.005
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 40 0.005
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 40 0.005
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 40 0.005
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 40 0.005
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 39 0.006
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|12056465 fibrillarin [Homo sapiens] 39 0.006
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 39 0.008
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 39 0.008
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 39 0.011
gi|24497501 forkhead box A1 [Homo sapiens] 39 0.011
>gi|66346681 SERPINE1 mRNA binding protein 1 isoform 2 [Homo
sapiens]
Length = 402
Score = 828 bits (2139), Expect = 0.0
Identities = 402/402 (100%), Positives = 402/402 (100%)
Query: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ
Sbjct: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
Query: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE
Sbjct: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
Query: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
Sbjct: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
Query: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNY 240
RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNY
Sbjct: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNY 240
Query: 241 SDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF 300
SDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF
Sbjct: 241 SDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF 300
Query: 301 NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG 360
NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG
Sbjct: 301 NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG 360
Query: 361 RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 402
RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA
Sbjct: 361 RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 402
>gi|66346679 SERPINE1 mRNA binding protein 1 isoform 1 [Homo
sapiens]
Length = 408
Score = 822 bits (2122), Expect = 0.0
Identities = 402/408 (98%), Positives = 402/408 (98%), Gaps = 6/408 (1%)
Query: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ
Sbjct: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
Query: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE
Sbjct: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
Query: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
Sbjct: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
Query: 181 RGDGFDSRGKREFDRHSGSDRS------GLKHEDKRGGSGSHNWGTVKDELTESPKYIQK 234
RGDGFDSRGKREFDRHSGSDRS GLKHEDKRGGSGSHNWGTVKDELTESPKYIQK
Sbjct: 181 RGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQK 240
Query: 235 QISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD 294
QISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD
Sbjct: 241 QISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD 300
Query: 295 RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG 354
RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG
Sbjct: 301 RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG 360
Query: 355 DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 402
DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA
Sbjct: 361 DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 408
>gi|66346685 SERPINE1 mRNA binding protein 1 isoform 4 [Homo
sapiens]
Length = 387
Score = 788 bits (2034), Expect = 0.0
Identities = 387/402 (96%), Positives = 387/402 (96%), Gaps = 15/402 (3%)
Query: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ
Sbjct: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
Query: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE
Sbjct: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
Query: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
Sbjct: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
Query: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNY 240
RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELT
Sbjct: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELT-------------- 226
Query: 241 SDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF 300
DLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF
Sbjct: 227 -DLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEF 285
Query: 301 NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG 360
NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG
Sbjct: 286 NIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPG 345
Query: 361 RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 402
RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA
Sbjct: 346 RGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 387
>gi|66346683 SERPINE1 mRNA binding protein 1 isoform 3 [Homo
sapiens]
Length = 393
Score = 781 bits (2017), Expect = 0.0
Identities = 387/408 (94%), Positives = 387/408 (94%), Gaps = 21/408 (5%)
Query: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ
Sbjct: 1 MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQ 60
Query: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE
Sbjct: 61 TNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGE 120
Query: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
Sbjct: 121 GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
Query: 181 RGDGFDSRGKREFDRHSGSDR------SGLKHEDKRGGSGSHNWGTVKDELTESPKYIQK 234
RGDGFDSRGKREFDRHSGSDR SGLKHEDKRGGSGSHNWGTVKDELT
Sbjct: 181 RGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGGSGSHNWGTVKDELT-------- 232
Query: 235 QISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD 294
DLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD
Sbjct: 233 -------DLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKD 285
Query: 295 RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG 354
RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG
Sbjct: 286 RAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRKPANDITSQLEINFG 345
Query: 355 DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 402
DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA
Sbjct: 346 DLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDPEAFPALA 393
>gi|157676331 hyaluronan binding protein 4 [Homo sapiens]
Length = 413
Score = 256 bits (654), Expect = 3e-68
Identities = 177/425 (41%), Positives = 229/425 (53%), Gaps = 54/425 (12%)
Query: 5 LQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKE----------AGGGGVGGPGAKSA 54
+QE FGCVV NRF QL DDESDPF++L+ AE ++++ A G G G +S
Sbjct: 16 MQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKRRDEAAAAAGAGPRGGRSP 75
Query: 55 AQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPD 114
A A+ + AG R+ESQK+RK+ LP V + P L+ G +R RR +
Sbjct: 76 AGASG----HRAGAGGRRESQKERKS-LPAPVA----QRPDSPGGGLQAPGQKRTPRRGE 126
Query: 115 QQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGG--------EFSVDRPIIDRPIRGRG 166
QQ + + + ER R R +P E + + E DR DRP+RGRG
Sbjct: 127 QQGWNDSRGPEGMLERAERRSYREYRPYETERQADFTAEKFPDEKPGDRFDRDRPLRGRG 186
Query: 167 GLGRGRGGRGRGMGRG----DGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVK 222
G G GRGRG G G D FD RGKREF+R+ G+D+ ++ ED GG G WG+ K
Sbjct: 187 GPRGGMRGRGRG-GPGNRVFDAFDQRGKREFERYGGNDKIAVRTEDNMGGCGVRTWGSGK 245
Query: 223 DELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEM 282
D P + +++ V EE+ + P ++ K E+E +E +EM
Sbjct: 246 DTSDVEPT----------APMEEPTVVEES----QGTPEEESPAKVPELEVEEETQVQEM 291
Query: 283 TLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMD--HHFRK 340
TLDEWK +Q + R K EFNIRKP K V+HKSK + +D D H FRK
Sbjct: 292 TLDEWKNLQEQTRPKPEFNIRKPESTVPS---KAVVIHKSKYRDDMVKDDYEDDSHVFRK 348
Query: 341 PANDITSQLEINFGDLGRPGRGGRGG-RGGRGRGGR-PNRGSRTDKSSAS-APDVDDPEA 397
PANDITSQLEINFG+L RPGRG RGG RGGRGR R N G R + AP+ DDPE
Sbjct: 349 PANDITSQLEINFGNLPRPGRGARGGTRGGRGRIRRAENYGPRAEVVMQDVAPNPDDPED 408
Query: 398 FPALA 402
FPAL+
Sbjct: 409 FPALS 413
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 54.7 bits (130), Expect = 1e-07
Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 25/294 (8%)
Query: 20 LFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRK 79
L DD +D EV +E K K G G G + + + R++ +KD+
Sbjct: 626 LSDDLTDKAEV---SEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKG 682
Query: 80 NPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFE 139
G +++ E + +A K+E +R G +Q+ + +G +R E E
Sbjct: 683 R------GEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGE---- 732
Query: 140 KPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGR---GGRGRGMGRGDGFDSRGKREFDRH 196
EE GEG E DR + G G G R + G + GK E
Sbjct: 733 ---EEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEE 789
Query: 197 SGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGE 256
G G + E + G G V+ E K +++ + ++ EE EGE
Sbjct: 790 EGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREE------EEEEGEGEEEEGEGE 843
Query: 257 EHHPVADTENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGAD 310
E + E E + EE EEG E +E + ++ + E EG +
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEE 897
Score = 45.1 bits (105), Expect = 1e-04
Identities = 61/305 (20%), Positives = 113/305 (37%), Gaps = 28/305 (9%)
Query: 35 ENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEE 94
E ++K+ G G + Q + + ++E + + G +++EE
Sbjct: 772 EGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEE 831
Query: 95 TQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEG-GEFSV 153
+ EG G +++ +G+G+ E E + EE+GEG GE
Sbjct: 832 EGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEG 891
Query: 154 DRPIIDRPIRGRG-----GLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ + G G G G G G+G G+ + G+ E G D G E+
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+ G G + E + + E EGEE + E +E
Sbjct: 952 EGEWEGEEEEGEGEGE-----------------EEGEGEGEEGEGEGEEEEGEGEGEEEE 994
Query: 269 NEVEEVKEEGPKEMTLDEWKAI-QNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEA 327
E EE +EEG E +E + + ++ +VE + +G+ ++G + + +E
Sbjct: 995 GE-EEGEEEGEGE---EEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEG 1050
Query: 328 HAEDS 332
E++
Sbjct: 1051 EGEEN 1055
Score = 41.2 bits (95), Expect = 0.002
Identities = 66/306 (21%), Positives = 106/306 (34%), Gaps = 46/306 (15%)
Query: 35 ENKKKEAGGGGVG------GPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGV 88
E K +E G G G G G + + GK R+E +++ + G
Sbjct: 784 EEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGE 843
Query: 89 VDKKE--ETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKG 146
++ E E + ++EG G ++ +GEG+ + E E E EE+G
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE---EEEG 900
Query: 147 EG-----GEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDR 201
EG GE + + G G G G G G G+ + G+ E G +
Sbjct: 901 EGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEE 960
Query: 202 SGLKHEDKRG--------GSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEE-- 251
G ++ G G G G + E E + +++ + EE
Sbjct: 961 EGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGE 1020
Query: 252 -------------------TPEGEEHHPVAD-TENKENEVEEVKEEGPKEMTLDEWKAIQ 291
EGEE + EN+ N EE +EEG + T +E Q
Sbjct: 1021 VEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQ 1080
Query: 292 NKDRAK 297
+ + K
Sbjct: 1081 DGEEYK 1086
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 44.3 bits (103), Expect = 2e-04
Identities = 70/274 (25%), Positives = 97/274 (35%), Gaps = 50/274 (18%)
Query: 16 RFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQ 75
R D +FDDE P A +KK G SAA ++ + G QLR ES
Sbjct: 35 RDDAVFDDEVAPNAASDNASAEKKVKSPRAALDGGVASAASPESKPSPGTKG-QLRGES- 92
Query: 76 KDRKNPLPPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRE 135
DR PP+ +K ++ A+ P G P +R P
Sbjct: 93 -DRSKQPPPASSPTKRKGRSRALEAV-----------PAPPASGPRAPAKESPPKRVPDP 140
Query: 136 RRFEK-PLEEKGEGGEFSVDR--PIID-------RPIRGRGGL-----GRGRGGRGRGMG 180
K E GE ++ R P+ +P RG L GR GGR R +G
Sbjct: 141 SPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGRAEGGRSRELG 200
Query: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNY 240
R G SD GLK + G S T K L PK+++ +
Sbjct: 201 RAAG----------APGASDADGLKPRNHFGVGRS--TVTTKVTLPAKPKHVELNLK-TP 247
Query: 241 SDLDQSNVTEETPEGEEHHPVADTENKENEVEEV 274
+LD G EH+P + +K N ++
Sbjct: 248 KNLDSL--------GNEHNPFSQPVHKGNTATKI 273
>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
Length = 696
Score = 42.4 bits (98), Expect = 8e-04
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 188 RGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSN 247
+G RE D S +DR+ + ED +N G +DE E+ + ++ + + QSN
Sbjct: 529 QGPREADPESEADRAAV--EDINPADDPNNQG--EDEFEEAEQVREENLPDENEEQKQSN 584
Query: 248 VTEETPEGEEHHPVADTENKENE------VEEVKEEGPKEMTLDEWKAIQ-NKDRAKVEF 300
+E E EEH +A +++ + EE +EE +++T ++ + ++ N + E
Sbjct: 585 QKQENTEVEEHLVMAGNPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNAEETYGEN 644
Query: 301 NIRKPNEGADGQWKKGFVLHKSKSEEAHAED 331
+ ++ DG+ ++ ++ K E H E+
Sbjct: 645 DENTDDKNNDGEEQEVRDDNRPKGREEHYEE 675
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 42.4 bits (98), Expect = 8e-04
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 42 GGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVAL 101
G G G K +A++ + N G+ K+ K++ + G + ++
Sbjct: 1562 GDGREPRTGIKRKLLSASEEDENMGGEDKEKKETKEKSHLSTSESGELGSSLSSESTCGS 1621
Query: 102 KKEGIRRVGRRPDQQLQGE---GKIIDRRPERRPPRER-RFEKPLEEKGEGGEFSVDR-P 156
+ R + G+ K I RP+R+ ++ ++ + +G GG R
Sbjct: 1622 DSDS-ESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWG 1680
Query: 157 IIDRPIRGRGGLG---RGRGG---RGRGMGRGDGFDSRG 189
R RGRGG G RGRGG RGRG GRG SRG
Sbjct: 1681 RWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGASRG 1719
Score = 37.7 bits (86), Expect = 0.019
Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 354 GDLGRPGRGGRGGRGGRGRGGRPNRGSR 381
G GR GR GR RGGRGRGGR RGSR
Sbjct: 1671 GGRGRWGRWGRWSRGGRGRGGR-GRGSR 1697
Score = 33.5 bits (75), Expect = 0.35
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 353 FGDLGRPGRGGRGGRGGRGRGGRPNRGSRT 382
+G GR RGGRG RGGRGRG R G T
Sbjct: 1676 WGRWGRWSRGGRG-RGGRGRGSRGRGGGGT 1704
Score = 30.8 bits (68), Expect = 2.3
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 354 GDLGRPGRGGRGGRGGRGRG-GRPNRGSRTDKSSASAPDVDDPE 396
G GR R GRGG G RGRG GR RG+ + A + D E
Sbjct: 1690 GGRGRGSR-GRGGGGTRGRGRGRGGRGASRGATRAKRARIADDE 1732
Score = 28.9 bits (63), Expect = 8.6
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 357 GRPGRGGRG--GRGGRGRGGR-PNRGSRTDKSSASAPDVDD 394
G GRGG G GR GRGRGGR +RG+ K + A D D
Sbjct: 1695 GSRGRGGGGTRGR-GRGRGGRGASRGATRAKRARIADDEFD 1734
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 42.0 bits (97), Expect = 0.001
Identities = 45/139 (32%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 126 RRPER-RPPRERRFEKP----LEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG 180
RRP R RP +R E+P +G GG D GR G GRGRG RG G
Sbjct: 13 RRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGG-------GRRGRGRGRGFRGARGG 65
Query: 181 RGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYN- 239
RG G RG R G+ S +D S + +G +E E Y +++I N
Sbjct: 66 RGGGGAPRGSRREPGGWGAGASAPVEDD----SDAETYG---EENDEQGNYSKRKIVSNW 118
Query: 240 --YSDLDQSNVTEETPEGE 256
Y D+++ V E+ E +
Sbjct: 119 DRYQDIEK-EVNNESGESQ 136
Score = 40.8 bits (94), Expect = 0.002
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 360 GRGGRGGRGGRGRGGRPNRGSRTDK----SSASAPDVDDPEA 397
GRG RG RGGRG GG P RGSR + + ASAP DD +A
Sbjct: 56 GRGFRGARGGRGGGGAP-RGSRREPGGWGAGASAPVEDDSDA 96
Score = 30.4 bits (67), Expect = 3.0
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 357 GRPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAP 390
G G G GGR GRGR GR RG+R + AP
Sbjct: 40 GGGGGGDGGGRRGRGR-GRGFRGARGGRGGGGAP 72
Score = 29.6 bits (65), Expect = 5.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 358 RPGRGGRGGRGGRGRGGRPNRGSRTDKSSASA 389
R RGGRG R GRGR G R ++A A
Sbjct: 5 RGARGGRGRRPGRGRPGGDRHSERPGAAAAVA 36
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 41.6 bits (96), Expect = 0.001
Identities = 53/196 (27%), Positives = 73/196 (37%), Gaps = 23/196 (11%)
Query: 31 LKAAENKKKEAGGGGVGGPGAKSAA-QAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVV 89
L E +K A G G GG G ++ +T R+ + P G +
Sbjct: 893 LTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPI 952
Query: 90 DK-----KEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEE 144
K K E PP L++ +PD +GK+ P+ PP P
Sbjct: 953 KKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKL--GGPKETPPNGNLSPAPRLR 1010
Query: 145 KGEGGEFSVDRPIIDRPIRGRGG---LGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDR 201
+ ++S +R + RGRG RGRG RG GRG G SR R + G D
Sbjct: 1011 R----DYSYER-VGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDG 1065
Query: 202 SGLKHEDKRGGSGSHN 217
G GG+G N
Sbjct: 1066 RG-------GGTGGPN 1074
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 40.4 bits (93), Expect = 0.003
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 31/201 (15%)
Query: 35 ENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQL--------RKESQKDRKNPLPPSV 86
+N + GG G K+ AAA T G+Q RK+ ++ K P
Sbjct: 314 QNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKA 373
Query: 87 GVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKG 146
K K+G+R RR G+G+ ++P + PR RR +K K
Sbjct: 374 SAAGAKSRGGGD----KKGLREAKRR------GDGR---KKPRWQNPR-RRAQKAPAAKP 419
Query: 147 EGGEFSVDRPIIDRPIRGRGGLGRGRGG---RGRGM-GRGDGFDSRGKREFDRHSGSDRS 202
GG R + + RGG R GG R RG R ++ + D+ G ++
Sbjct: 420 RGGGSKKPRRRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKA 479
Query: 203 GLKHEDKRGG-----SGSHNW 218
RGG SG + W
Sbjct: 480 SAAGTKSRGGGLKSHSGKNLW 500
Score = 38.1 bits (87), Expect = 0.014
Identities = 45/197 (22%), Positives = 70/197 (35%), Gaps = 14/197 (7%)
Query: 38 KKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDR------------KNPLPPS 85
+K A GV G + +AAA + +GK+ R+ K R K+ +
Sbjct: 158 QKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKT 217
Query: 86 VGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEK 145
G KK P A + R G++P +Q + K R +K L +
Sbjct: 218 RGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQ 277
Query: 146 GEGGEFSVDRPIIDRPIRGRGGLGRGRGGRG-RGMGRGDGFDSRGKREFDRHSGSDRSGL 204
G+ + + G +GRGGRG + +G + RG ++ R
Sbjct: 278 GQNAALAGAKR-RGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAA 336
Query: 205 KHEDKRGGSGSHNWGTV 221
KRGG G V
Sbjct: 337 AAGTKRGGGGQQKAAVV 353
Score = 34.3 bits (77), Expect = 0.20
Identities = 48/198 (24%), Positives = 67/198 (33%), Gaps = 47/198 (23%)
Query: 43 GGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQ-----KDRKNPL--------------- 82
GGG PG + AA ++ S GK+ ++ K RK P
Sbjct: 589 GGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWA 648
Query: 83 --PPSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEK 140
S G K+ Q P A E + R+ PR RR
Sbjct: 649 TGATSRGSGGKQPRWQKPAAAGSES------------SAAAAVGQEAEARKKPRRRR--- 693
Query: 141 PLEEKGEGGEFSVDRPIIDRPIRGRGG---LGRGRGGRGRGMGRGDGFDSRGKREFDRHS 197
+ +G+GG+ + + P + RG LG+ RGG G G SRG S
Sbjct: 694 -AKSRGDGGQ---NAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRS 749
Query: 198 GSDRSGLKHEDKRGGSGS 215
G + K GG G+
Sbjct: 750 GKKAAASK---SHGGGGA 764
Score = 32.3 bits (72), Expect = 0.78
Identities = 49/182 (26%), Positives = 65/182 (35%), Gaps = 33/182 (18%)
Query: 33 AAENKKKEAGGGG-------VGGPGAKSAAQ--------AAAQTNSNAAGKQLRKESQKD 77
AA K +G GG G GAKS + AAA + A G R K
Sbjct: 601 AAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQ 660
Query: 78 RKNPLPPSVGVVDKKEETQPPVALKKEG-IRRVGRRPDQQLQGEGKIIDRRPERRPPRER 136
+ P + G E+ A+ +E R+ RR + +G+G P +R
Sbjct: 661 PRWQKPAAAG-----SESSAAAAVGQEAEARKKPRRRRAKSRGDGG--QNAAVGINPWQR 713
Query: 137 RFEKPLEEKGEGGEFSVDRPIIDRPIRGRGG----------LGRGRGGRGRGMGRGDGFD 186
R +KP K GG + R RG GG + GG G RG G
Sbjct: 714 RGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAK 773
Query: 187 SR 188
SR
Sbjct: 774 SR 775
Score = 30.4 bits (67), Expect = 3.0
Identities = 48/183 (26%), Positives = 61/183 (33%), Gaps = 30/183 (16%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNS-NAAGKQLRKESQK----DRKNP---LP 83
+A ++ +K AG GG G AAA T S G++ R+ QK K P
Sbjct: 84 EARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQKAAATGSKKPRWRAQ 143
Query: 84 PSVGVVDKKEETQPPVALKKEGIRRVGRRPDQQLQGEG--KIIDRRPERRPPRER----- 136
S K A G++ G Q+ G ++P RR + R
Sbjct: 144 KSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDK 203
Query: 137 ----RFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGG-------RGRGMGRGDGF 185
R K K GG R RP GG RGG R RG G
Sbjct: 204 KGRQREAKSRFGKTRGGRRKKHR----RPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGG 259
Query: 186 DSR 188
SR
Sbjct: 260 KSR 262
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 18/66 (27%)
Query: 128 PERRPPRERRFEKPLEEKG--EGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGF 185
P + P +R +P EKG GG GRGG G GRGG GRG GRG GF
Sbjct: 148 PYKLLPLQRFLPRPPGEKGPPRGG--------------GRGGRGGGRGGGGRGGGRGGGF 193
Query: 186 DSRGKR 191
RG R
Sbjct: 194 --RGGR 197
Score = 33.5 bits (75), Expect = 0.35
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 354 GDLGRPGRGGRGGRGGRGRGGRPNRGSR 381
G+ G P GGRGGRGG GRGG G R
Sbjct: 163 GEKGPPRGGGRGGRGG-GRGGGGRGGGR 189
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 22/69 (31%)
Query: 131 RPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRG----------MG 180
RPP E+ + G GG RG GG G GRGG RG G
Sbjct: 160 RPPGEKGPPRGGGRGGRGGG------------RGGGGRGGGRGGGFRGGRGGGGGGFRGG 207
Query: 181 RGDGFDSRG 189
RG GF RG
Sbjct: 208 RGGGFRGRG 216
Score = 30.4 bits (67), Expect = 3.0
Identities = 19/31 (61%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 354 GDLGRPGRGG-RGG--RGGRGRGGRPNRGSR 381
G G GRGG RGG RGGRG GG RG R
Sbjct: 178 GGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR 208
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 40.4 bits (93), Expect = 0.003
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 18/66 (27%)
Query: 128 PERRPPRERRFEKPLEEKG--EGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMGRGDGF 185
P + P +R +P EKG GG GRGG G GRGG GRG GRG GF
Sbjct: 148 PYKLLPLQRFLPRPPGEKGPPRGG--------------GRGGRGGGRGGGGRGGGRGGGF 193
Query: 186 DSRGKR 191
RG R
Sbjct: 194 --RGGR 197
Score = 33.5 bits (75), Expect = 0.35
Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 354 GDLGRPGRGGRGGRGGRGRGGRPNRGSR 381
G+ G P GGRGGRGG GRGG G R
Sbjct: 163 GEKGPPRGGGRGGRGG-GRGGGGRGGGR 189
Score = 30.4 bits (67), Expect = 3.0
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 22/69 (31%)
Query: 131 RPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRG----------MG 180
RPP E+ + G GG RG GG G GRGG RG G
Sbjct: 160 RPPGEKGPPRGGGRGGRGGG------------RGGGGRGGGRGGGFRGGRGGGGGGFRGG 207
Query: 181 RGDGFDSRG 189
RG GF RG
Sbjct: 208 RGGGFRGRG 216
Score = 30.4 bits (67), Expect = 3.0
Identities = 19/31 (61%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 354 GDLGRPGRGG-RGG--RGGRGRGGRPNRGSR 381
G G GRGG RGG RGGRG GG RG R
Sbjct: 178 GGRGGGGRGGGRGGGFRGGRGGGGGGFRGGR 208
>gi|166197712 LSM14 homolog A isoform a [Homo sapiens]
Length = 463
Score = 40.4 bits (93), Expect = 0.003
Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 56/214 (26%)
Query: 161 PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGT 220
P RGRGG RGGRGR R DG + +++FD S + + + D+ HN
Sbjct: 268 PRRGRGG---HRGGRGRFGIRRDG-PMKFEKDFDFESANAQFNKEEIDRE----FHNKLK 319
Query: 221 VKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 280
+K++ E +++ N D S V DT+N E +E GP
Sbjct: 320 LKEDKLE-----KQEKPVNGEDKGDSGV--------------DTQNSEGNADEEDPLGPN 360
Query: 281 EMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRK 340
D+ K F+ N D ++ AE+ R
Sbjct: 361 CYY----------DKTKSFFD----NISCDDNRER---------RPTWAEER------RL 391
Query: 341 PANDITSQLEINFGDLGRPGRGGRGGRGGRGRGG 374
A L N G G GRGG G RGGRGRGG
Sbjct: 392 NAETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGG 425
Score = 38.1 bits (87), Expect = 0.014
Identities = 37/88 (42%), Positives = 39/88 (44%), Gaps = 32/88 (36%)
Query: 125 DRRPERRPP--RERR-----FEKPLE-EKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRG 176
D ERRP ERR F PL +G GG RGRGGLG RGGRG
Sbjct: 376 DDNRERRPTWAEERRLNAETFGIPLRPNRGRGG------------YRGRGGLGF-RGGRG 422
Query: 177 RGMGRGDGFDS-----------RGKREF 193
RG GRG F + RG REF
Sbjct: 423 RGGGRGGTFTAPRGFRGGFRGGRGGREF 450
>gi|166197710 LSM14 homolog A isoform b [Homo sapiens]
Length = 463
Score = 40.4 bits (93), Expect = 0.003
Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 56/214 (26%)
Query: 161 PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGT 220
P RGRGG RGGRGR R DG + +++FD S + + + D+ HN
Sbjct: 268 PRRGRGG---HRGGRGRFGIRRDG-PMKFEKDFDFESANAQFNKEEIDRE----FHNKLK 319
Query: 221 VKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 280
+K++ E +++ N D S V DT+N E +E GP
Sbjct: 320 LKEDKLE-----KQEKPVNGEDKGDSGV--------------DTQNSEGNADEEDPLGPN 360
Query: 281 EMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVMDHHFRK 340
D+ K F+ N D ++ AE+ R
Sbjct: 361 CYY----------DKTKSFFD----NISCDDNRER---------RPTWAEER------RL 391
Query: 341 PANDITSQLEINFGDLGRPGRGGRGGRGGRGRGG 374
A L N G G GRGG G RGGRGRGG
Sbjct: 392 NAETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGG 425
Score = 38.1 bits (87), Expect = 0.014
Identities = 37/88 (42%), Positives = 39/88 (44%), Gaps = 32/88 (36%)
Query: 125 DRRPERRPP--RERR-----FEKPLE-EKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRG 176
D ERRP ERR F PL +G GG RGRGGLG RGGRG
Sbjct: 376 DDNRERRPTWAEERRLNAETFGIPLRPNRGRGG------------YRGRGGLGF-RGGRG 422
Query: 177 RGMGRGDGFDS-----------RGKREF 193
RG GRG F + RG REF
Sbjct: 423 RGGGRGGTFTAPRGFRGGFRGGRGGREF 450
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 51 AKSAAQAAAQTNSNAAGKQLRK--ESQKDRKNPLPPSVGVVDKKEETQPPVALKKEG--- 105
A+SA+ +++ ++S+ + ++K +K + PLP G K E +PP + +
Sbjct: 251 ARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE--RPPSSSSSDSDSD 308
Query: 106 -IRRVG---------------RRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGG 149
+ R+ RR +Q + ++ ++ E + R R ++ E+G GG
Sbjct: 309 EVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGG 368
Query: 150 EFSVDRPIIDRPIRGRGGLGRGRG 173
+ D P++ RG GRGRG
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRG 392
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 51 AKSAAQAAAQTNSNAAGKQLRK--ESQKDRKNPLPPSVGVVDKKEETQPPVALKKEG--- 105
A+SA+ +++ ++S+ + ++K +K + PLP G K E +PP + +
Sbjct: 251 ARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPE--RPPSSSSSDSDSD 308
Query: 106 -IRRVG---------------RRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGG 149
+ R+ RR +Q + ++ ++ E + R R ++ E+G GG
Sbjct: 309 EVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERADRGEAERGSGG 368
Query: 150 EFSVDRPIIDRPIRGRGGLGRGRG 173
+ D P++ RG GRGRG
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRG 392
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 150 EFSVDRPIIDRP-IRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ S D+P P + + LG G GG S+GK + D+ SG +K +
Sbjct: 1272 KLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGD----VKEKK 1327
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+G GS KDE E +QK + DQSN P+ ++ +D K+
Sbjct: 1328 GKGSLGSQG---AKDEPEEE---LQKGMG-TVEGGDQSN-----PKSKKEKKKSDKRKKD 1375
Query: 269 NEVEEVKEEGPKEMTLDEWKAIQNKDRAK 297
E +E K++ K T D Q K + K
Sbjct: 1376 KEKKEKKKKAKKASTKDSESPSQKKKKKK 1404
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPL-PPSVGVVD 90
+ +KKK+ G G GG A+ + +T++ + GK R ++ D K S+G
Sbjct: 1281 RTPRSKKKKKLGAGEGG----EASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQG 1336
Query: 91 KKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERR 137
K+E + + K G G + + + + E K D+R + + +E++
Sbjct: 1337 AKDEPEEELQ-KGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKK 1382
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 150 EFSVDRPIIDRP-IRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ S D+P P + + LG G GG S+GK + D+ SG +K +
Sbjct: 1311 KLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGD----VKEKK 1366
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+G GS KDE E +QK + DQSN P+ ++ +D K+
Sbjct: 1367 GKGSLGSQG---AKDEPEEE---LQKGMG-TVEGGDQSN-----PKSKKEKKKSDKRKKD 1414
Query: 269 NEVEEVKEEGPKEMTLDEWKAIQNKDRAK 297
E +E K++ K T D Q K + K
Sbjct: 1415 KEKKEKKKKAKKASTKDSESPSQKKKKKK 1443
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPL-PPSVGVVD 90
+ +KKK+ G G GG A+ + +T++ + GK R ++ D K S+G
Sbjct: 1320 RTPRSKKKKKLGAGEGG----EASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQG 1375
Query: 91 KKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERR 137
K+E + + K G G + + + + E K D+R + + +E++
Sbjct: 1376 AKDEPEEELQ-KGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKK 1421
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 150 EFSVDRPIIDRP-IRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ S D+P P + + LG G GG S+GK + D+ SG +K +
Sbjct: 1348 KLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGD----VKEKK 1403
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+G GS KDE E +QK + DQSN P+ ++ +D K+
Sbjct: 1404 GKGSLGSQG---AKDEPEEE---LQKGMG-TVEGGDQSN-----PKSKKEKKKSDKRKKD 1451
Query: 269 NEVEEVKEEGPKEMTLDEWKAIQNKDRAK 297
E +E K++ K T D Q K + K
Sbjct: 1452 KEKKEKKKKAKKASTKDSESPSQKKKKKK 1480
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPL-PPSVGVVD 90
+ +KKK+ G G GG A+ + +T++ + GK R ++ D K S+G
Sbjct: 1357 RTPRSKKKKKLGAGEGG----EASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQG 1412
Query: 91 KKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERR 137
K+E + + K G G + + + + E K D+R + + +E++
Sbjct: 1413 AKDEPEEELQ-KGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKK 1458
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
sapiens]
Length = 1411
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 150 EFSVDRPIIDRP-IRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ S D+P P + + LG G GG S+GK + D+ SG +K +
Sbjct: 1271 KLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGD----VKEKK 1326
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+G GS KDE E +QK + DQSN P+ ++ +D K+
Sbjct: 1327 GKGSLGSQG---AKDEPEEE---LQKGMG-TVEGGDQSN-----PKSKKEKKKSDKRKKD 1374
Query: 269 NEVEEVKEEGPKEMTLDEWKAIQNKDRAK 297
E +E K++ K T D Q K + K
Sbjct: 1375 KEKKEKKKKAKKASTKDSESPSQKKKKKK 1403
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPL-PPSVGVVD 90
+ +KKK+ G G GG A+ + +T++ + GK R ++ D K S+G
Sbjct: 1280 RTPRSKKKKKLGAGEGG----EASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQG 1335
Query: 91 KKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERR 137
K+E + + K G G + + + + E K D+R + + +E++
Sbjct: 1336 AKDEPEEELQ-KGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKK 1381
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 39.7 bits (91), Expect = 0.005
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 150 EFSVDRPIIDRP-IRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHED 208
+ S D+P P + + LG G GG S+GK + D+ SG +K +
Sbjct: 1310 KLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGD----VKEKK 1365
Query: 209 KRGGSGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKE 268
+G GS KDE E +QK + DQSN P+ ++ +D K+
Sbjct: 1366 GKGSLGSQG---AKDEPEEE---LQKGMG-TVEGGDQSN-----PKSKKEKKKSDKRKKD 1413
Query: 269 NEVEEVKEEGPKEMTLDEWKAIQNKDRAK 297
E +E K++ K T D Q K + K
Sbjct: 1414 KEKKEKKKKAKKASTKDSESPSQKKKKKK 1442
Score = 28.9 bits (63), Expect = 8.6
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 32 KAAENKKKEAGGGGVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPL-PPSVGVVD 90
+ +KKK+ G G GG A+ + +T++ + GK R ++ D K S+G
Sbjct: 1319 RTPRSKKKKKLGAGEGG----EASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQG 1374
Query: 91 KKEETQPPVALKKEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERR 137
K+E + + K G G + + + + E K D+R + + +E++
Sbjct: 1375 AKDEPEEELQ-KGMGTVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKK 1420
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 39.3 bits (90), Expect = 0.006
Identities = 60/286 (20%), Positives = 109/286 (38%), Gaps = 31/286 (10%)
Query: 50 GAKSAAQAAAQTNSNAAGKQLRKES-QKDRKNPLPPSVGVVDKKEETQPPVALKK-EGIR 107
G++S +++ +++ S + K+ + S K++ S G K + Q ++ + +
Sbjct: 225 GSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVG 284
Query: 108 RVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGG 167
+ R + + + K R ERR E+R +G E S+ R R R
Sbjct: 285 KPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSV---SRGRSQEKSL------RQSRSRS- 334
Query: 168 LGRGRGG-RGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGTVKDELT 226
R +GG R R R D R R+ R RS + + +R S G+ +D
Sbjct: 335 --RSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSER----SRKRGSKRDSKA 388
Query: 227 ESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPKEMTLDE 286
S K +K+ +D QS + E H +++ +E E + G + T
Sbjct: 389 GSSKKKKKE----DTDRSQSRSPSRSVSKEREHAKSESSQREGRGES-ENAGTNQET--- 440
Query: 287 WKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDS 332
+++ R+ + P+E +SKS A S
Sbjct: 441 ----RSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRS 482
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 39.3 bits (90), Expect = 0.006
Identities = 45/162 (27%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Query: 48 GPGAKSAAQAAAQTNSNAAGKQL------RKESQKDRKNPLP------PSVGVVDKKEET 95
GPG AAQA A+ A + R R P+P P+ + +
Sbjct: 48 GPGRVRAAQARARRGGGARERPAEGARGPRAARGGARAAPMPSSAPRGPTEPALRRPSSA 107
Query: 96 QPPVALKKEGIRRVGRRP--------DQQLQGEGKIIDRRPERR----PPRERRFEKPLE 143
+ P+A VGR P + G+ + D RP R PP E+R LE
Sbjct: 108 ERPLAQAPSSSASVGRAPGAMASPSRSSEATGKPRGRDGRPRREEDDVPPEEKRLRLLLE 167
Query: 144 ------EKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGM 179
+ GE GE D P GR G GG GRG+
Sbjct: 168 GGSAQPQDGEDGE--------DAPRPGRVETGTQTGGDGRGV 201
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 148 GGEFSVDRPIIDRPIRG-RGGLG--RGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGL 204
GG F DR RG RGG G RGRGG RG GRG G G R G SG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGG 68
Query: 205 KHEDKRGGSGSHNWGTVKDELTESPKYIQKQISYNYSD--LDQSNVTEETPEGEEHHPVA 262
RGG + G K+ + E ++ I D + ++ V E+ GE+ ++
Sbjct: 69 NRGRGRGGKRGNQSG--KNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSIS 126
Query: 263 DTENK 267
+ ++K
Sbjct: 127 EGDDK 131
Score = 33.5 bits (75), Expect = 0.35
Identities = 18/23 (78%), Positives = 18/23 (78%), Gaps = 3/23 (13%)
Query: 353 FGDLGRPGRGGRGG-RGGRGRGG 374
FGD G GRGGRGG GGRGRGG
Sbjct: 18 FGDRG--GRGGRGGFGGGRGRGG 38
Score = 30.4 bits (67), Expect = 3.0
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 18/67 (26%)
Query: 165 RGGLGRGRGGRG------------RGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGG 212
RGG GRGG G G GRG GF RG+ G G RGG
Sbjct: 8 RGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGG------RGG 61
Query: 213 SGSHNWG 219
G H+ G
Sbjct: 62 GGFHSGG 68
Score = 30.4 bits (67), Expect = 3.0
Identities = 16/24 (66%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 357 GRPGRGGRGGRGGRGR-GGRPNRG 379
GR G G RGGRGGRG GG RG
Sbjct: 14 GRGGFGDRGGRGGRGGFGGGRGRG 37
Score = 29.6 bits (65), Expect = 5.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 357 GRPGRGGRGGRGGRGRGGRPNRGSR 381
G G GG GG GGRG GG + G+R
Sbjct: 46 GGGGGGGGGGGGGRGGGGFHSGGNR 70
Score = 29.3 bits (64), Expect = 6.6
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 360 GRGGRGGRGGRGRGGRPNRG 379
GRGG GG GG G GGR G
Sbjct: 44 GRGGGGGGGGGGGGGRGGGG 63
Score = 28.9 bits (63), Expect = 8.6
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 354 GDLGRPGRGGRGGRGG--------RGRGGRPNRGSRTDKSSASAP 390
G G G GG GGRGG RGRG RG+++ K+ P
Sbjct: 46 GGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMVEP 90
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.9 bits (89), Expect = 0.008
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 119 GEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRG 178
GE + RRP R PP RR P G P++ R GR G RGG G
Sbjct: 105 GEERSQPRRPRRPPPAPRR---PRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWS 161
Query: 179 MGR-----GDGFDSRGKREFDRHSGSDRSGLKHEDKR 210
G G G S G F S SG + E +R
Sbjct: 162 HGHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPRR 198
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.9 bits (89), Expect = 0.008
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 119 GEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRG 178
GE + RRP R PP RR P G P++ R GR G RGG G
Sbjct: 105 GEERSQPRRPRRPPPAPRR---PRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWS 161
Query: 179 MGR-----GDGFDSRGKREFDRHSGSDRSGLKHEDKR 210
G G G S G F S SG + E +R
Sbjct: 162 HGHTARVGGTGDSSAGLTTFPGSSRGGFSGREEEPRR 198
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 38.5 bits (88), Expect = 0.011
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Query: 126 RRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGG--LGRGRGGRGRGMGRGD 183
R P P R + G G P G GG + G G G G G
Sbjct: 444 RHPAEAPNNGARLSSEVSGSGSGNFGEEGNPQGKEDQEGSGGDYMPMNNWGSGNGRGSGG 503
Query: 184 GFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNWGT 220
G S G+ SG ++ + + RGG GS+ G+
Sbjct: 504 GQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGS 540
Score = 28.9 bits (63), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 360 GRGGRGGRGGRGRGGRPNRGSRTDKSSA 387
G+G RGG+G G+G N+ SR + +A
Sbjct: 526 GQGSRGGQGSNGQGSGGNQCSRDGQGTA 553
>gi|24497501 forkhead box A1 [Homo sapiens]
Length = 472
Score = 38.5 bits (88), Expect = 0.011
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 358 RPGRGGRGGRGGRGRGGRPNRGSRTDKSSASAPDVDDP 395
+PG GG GG G G G + SR D S AS P D P
Sbjct: 271 QPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSP 308
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,242,637
Number of Sequences: 37866
Number of extensions: 1118430
Number of successful extensions: 9947
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 7453
Number of HSP's gapped (non-prelim): 2256
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.