Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFYVE9 Sequence: fasta or formatted (762aa) NCBI GI: 6552337
Description:

zinc finger, FYVE domain containing 9 isoform 2

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [1425aa] zinc finger, FYVE domain containing 9 isoform 3
alt prot [1366aa] zinc finger, FYVE domain containing 9 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         40           2
 C cysteine            4.2         32           2
 D aspartate           7.1         54           2
 E glutamate           8.7         66           3
 F phenylalanine       2.8         21           1
 G glycine             5.5         42           2
 H histidine           1.8         14           2
 I isoleucine          3.0         23           1
 K lysine              6.0         46           2
 L leucine             8.7         66           3
 M methionine          2.4         18           1
 N asparagine          7.9         60           2
 P proline             5.6         43           2
 Q glutamine           3.9         30           1
 R arginine            3.0         23           2
 S serine             11.2         85           2
 T threonine           5.4         41           2
 V valine              5.1         39           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 9 isoform 2 [Homo... 
ZFYVE9                0.996   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.995   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE16               0.072   zinc finger, FYVE domain containing 16 
ZFYVE16               0.072   zinc finger, FYVE domain containing 16 
FGD6                  0.038   FYVE, RhoGEF and PH domain containing 6 
FGD2                  0.031   FYVE, RhoGEF and PH domain containing 2 
PLEKHF2               0.031   phafin 2 
FGD4                  0.029   FYVE, RhoGEF and PH domain containing 4 
ZFYVE21               0.029   zinc finger, FYVE domain containing 21 
FGD1                  0.029   faciogenital dysplasia protein 
ZFYVE28               0.027   zinc finger, FYVE domain containing 28 
PIKFYVE               0.027   phosphatidylinositol-3-phosphate 5-kinase type III ...
MTMR4                 0.027   myotubularin related protein 4 
MTMR3                 0.027   myotubularin-related protein 3 isoform b 
FGD5                  0.027   FYVE, RhoGEF and PH domain containing 5 
MTMR3                 0.026   myotubularin-related protein 3 isoform c 
RUFY2                 0.026   RUN and FYVE domain-containing 2 isoform a 
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.026   RUN and FYVE domain-containing 1 isoform a 
EEA1                  0.026   early endosome antigen 1, 162kD 
PLEKHF1               0.025   apoptosis-inducing protein D 
FYCO1                 0.023   FYVE and coiled-coil domain containing 1 
MTMR3                 0.022   myotubularin-related protein 3 isoform a 
ZFYVE26               0.022   zinc finger, FYVE domain containing 26 
ANKFY1                0.021   ankyrin repeat and FYVE domain containing 1 isoform...
WDFY3                 0.021   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.021   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
HGS                   0.021   hepatocyte growth factor-regulated tyrosine kinase su...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press