Guide to the Human Genome
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Name: PAK3 Sequence: fasta or formatted (580aa) NCBI GI: 189491755
Description:

p21-activated kinase 3 isoform b

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [544aa] p21-activated kinase 3 isoform a
alt prot [544aa] p21-activated kinase 3 isoform a
alt prot [565aa] p21-activated kinase 3 isoform c
alt prot [559aa] p21-activated kinase 3 isoform d
alt prot [544aa] p21-activated kinase 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         38           2
 C cysteine            1.0          6           1
 D aspartate           5.0         29           1
 E glutamate           9.5         55           7
 F phenylalanine       2.4         14           1
 G glycine             5.2         30           3
 H histidine           1.6          9           1
 I isoleucine          5.2         30           2
 K lysine              7.6         44           3
 L leucine             8.3         48           2
 M methionine          2.9         17           1
 N asparagine          5.3         31           2
 P proline             7.9         46           3
 Q glutamine           3.8         22           3
 R arginine            4.5         26           2
 S serine              8.4         49           2
 T threonine           5.7         33           1
 V valine              5.9         34           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p21-activated kinase 3 isoform b 
PAK3                  0.962   p21-activated kinase 3 isoform c 
PAK3                  0.954   p21-activated kinase 3 isoform d 
PAK3                  0.920   p21-activated kinase 3 isoform a 
PAK3                  0.920   p21-activated kinase 3 isoform a 
PAK3                  0.920   p21-activated kinase 3 isoform a 
PAK1                  0.730   p21-activated kinase 1 isoform 2 
PAK1                  0.693   p21-activated kinase 1 isoform 1 
PAK2                  0.661   p21-activated kinase 2 
PAK4                  0.278   p21-activated kinase 4 isoform 2 
PAK4                  0.278   p21-activated kinase 4 isoform 2 
PAK4                  0.259   p21-activated kinase 4 isoform 1 
PAK4                  0.259   p21-activated kinase 4 isoform 1 
PAK4                  0.259   p21-activated kinase 4 isoform 1 
PAK7                  0.256   p21-activated kinase 7 
PAK7                  0.256   p21-activated kinase 7 
PAK6                  0.244   p21-activated kinase 6 
PAK6                  0.244   p21-activated kinase 6 
PAK6                  0.244   p21-activated kinase 6 
STK3                  0.193   serine/threonine kinase 3 
STK4                  0.193   serine/threonine kinase 4 
MST4                  0.189   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.188   serine/threonine kinase 24 isoform b 
STK24                 0.188   serine/threonine kinase 24 isoform a 
STK25                 0.186   serine/threonine kinase 25 
MAP4K2                0.167   mitogen-activated protein kinase kinase kinase kinas...
SLK                   0.166   serine/threonine kinase 2 
MAP4K3                0.159   mitogen-activated protein kinase kinase kinase kinas...
MYO3A                 0.157   myosin IIIA 
TAOK1                 0.156   TAO kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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