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Search of human proteins with 61966733
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61966733 hypothetical protein LOC388199 [Homo sapiens]
(402 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61966733 hypothetical protein LOC388199 [Homo sapiens] 852 0.0
gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap... 773 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 64 2e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 2e-08
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 57 4e-08
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 50 3e-06
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 50 4e-06
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 50 4e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 50 5e-06
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 49 8e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 48 2e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 47 2e-05
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 47 3e-05
gi|115511036 alpha-kinase 3 [Homo sapiens] 46 5e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 46 5e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 46 7e-05
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 45 9e-05
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 45 9e-05
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 45 9e-05
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 45 9e-05
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 45 9e-05
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 45 9e-05
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens] 45 9e-05
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 45 1e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 45 1e-04
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 45 2e-04
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 45 2e-04
gi|56549694 enabled homolog isoform a [Homo sapiens] 44 3e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 44 3e-04
>gi|61966733 hypothetical protein LOC388199 [Homo sapiens]
Length = 402
Score = 852 bits (2200), Expect = 0.0
Identities = 402/402 (100%), Positives = 402/402 (100%)
Query: 1 MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI
Sbjct: 1 MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
Query: 61 SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT
Sbjct: 61 SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA
Sbjct: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
Query: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH
Sbjct: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
Query: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ
Sbjct: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
Query: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPA 360
LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPA
Sbjct: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPA 360
Query: 361 PGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWSHRSV 402
PGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWSHRSV
Sbjct: 361 PGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWSHRSV 402
>gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
sapiens]
Length = 373
Score = 773 bits (1997), Expect = 0.0
Identities = 373/402 (92%), Positives = 373/402 (92%), Gaps = 29/402 (7%)
Query: 1 MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI
Sbjct: 1 MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
Query: 61 SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT
Sbjct: 61 SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA
Sbjct: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
Query: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH
Sbjct: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
Query: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ
Sbjct: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
Query: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPA 360
LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPAT
Sbjct: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPAT---------------- 344
Query: 361 PGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWSHRSV 402
GAARFGPRSCPLGSPAVLAVTTGWSHRSV
Sbjct: 345 -------------GAARFGPRSCPLGSPAVLAVTTGWSHRSV 373
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 63.9 bits (154), Expect = 2e-10
Identities = 93/388 (23%), Positives = 129/388 (33%), Gaps = 42/388 (10%)
Query: 7 KPPCRGGCWGQPGHPNTGGAAAHPTYHPMGH-RPRTCILLRGDQTTG-------GQAPSR 58
+PP G P AA P P G +P L G G P
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186
Query: 59 EISLGPWAAGT----------HFLAISTTPWGRKTPACISELP--TSSGTA---QPLANA 103
GP AA T H A PA + LP + GT P A
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA 246
Query: 104 VCEVQTVPGPGL-RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPP 162
P P P PA AP+ PP P P +P HP T P+ PP
Sbjct: 247 AAP----PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPG---HPAGPPTAAPAVPP 299
Query: 163 PAASRYGQTPGREPRVQAPGLGPC---GRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVG 219
PAA++ G + G P GP G+P G + + ++ + A
Sbjct: 300 PAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQ 359
Query: 220 GDRTDIPSAIAAGPARTPDRHG-LPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
P++ AA P G LP P + P P G+ G P G +G + S P+
Sbjct: 360 TLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGT-PTGLPKGAAGAVTQSLSRTPTA 418
Query: 279 ANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEA 338
+RA T+ + +L + P L ++ G L+ P +A
Sbjct: 419 TTSGIRA-----TLTPTVLAPRLPQP-PQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQA 472
Query: 339 AQDPATRRTAPPRRTASPEPPAPGAPLP 366
+ A P+ T +P P P + P
Sbjct: 473 LAQMQAQAHAQPQTTMAPRPATPTSAPP 500
Score = 57.4 bits (137), Expect = 2e-08
Identities = 96/344 (27%), Positives = 118/344 (34%), Gaps = 68/344 (19%)
Query: 57 SREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLR 116
S E L AA H LA TP R A SG+ A A PG
Sbjct: 28 SLESQLAASAAHHHHLA-PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAA 86
Query: 117 PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREP 176
P+ PA RA G P P P P +P V GP+PP
Sbjct: 87 PEPPPAGRARPGGGGPQRPGPPSPRRPL---------VPAGPAPP-------------AA 124
Query: 177 RVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDA-AVGGDRTDIPSAIAAGPAR 235
+++ P G G A +P A A G + A AGPA
Sbjct: 125 KLRPPPEGSAGSCAP-------------------VPAAAAVAAGPEPAPAGPAKPAGPAA 165
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
R G P PG P P G G G+ G +A++ S A LL + + +S+
Sbjct: 166 LAARAG-PGPGPGPGPGPGPG-----PGKPAGPGAAQTLNGSAA--LLNSHHAAAPAVSL 217
Query: 296 LWTGQLSRGWALLP---PGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRR 352
+ G ALLP P G ++T G AA P AA P AP
Sbjct: 218 VNNGPA----ALLPLPKPAAPGTVIQTPPF-VGAAA-----PPAPAAPSPPA-APAPAAP 266
Query: 353 TASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTG 396
A+P PP P PA R PG P + P P A G
Sbjct: 267 AAAPPPPPPA---PATLARPPGHPAGPPTAAPAVPPPAAAQNGG 307
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 2e-08
Identities = 83/330 (25%), Positives = 107/330 (32%), Gaps = 41/330 (12%)
Query: 75 STTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPT 134
S +P G TP + G A P + P P PA PS KG P T
Sbjct: 933 SPSPKGAPTPPAATPPSPKGGPATP------SPKWAPTP-------PAATPPSPKGGPAT 979
Query: 135 PNPWG-PEQPQNRHKHPKKGVT-----GGPSPPPPAASRYGQTPGREPRVQAPGLGPCGR 188
P+P G P P PK G G P+PP +P P + P
Sbjct: 980 PSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAAT 1039
Query: 189 PAS--GRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTD-----------IPSAIAAGPAR 235
P S G + L KG +P + GG T P + GPA
Sbjct: 1040 PPSPKGSPAATPLPKGAPTTPAATLP---SPKGGPATPSLKGAPTPPAATPPSPKGGPA- 1095
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
TP G P+P + TP G L P + G + ++ P L G +
Sbjct: 1096 TPSPKGAPMPPAA-TPPSPKGGLATPPHK--GAPTTPAATPPSPKGGLATPPPKGAPTTP 1152
Query: 296 LWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTAS 355
T +G PP G + G+ P A PA +P A+
Sbjct: 1153 AATPPSPKGGLATPP-PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1211
Query: 356 PEPP-APGAPLPACPGRIPGAARFGPRSCP 384
P P AP P P G A P+ P
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGLATPSPKGAP 1241
Score = 52.0 bits (123), Expect = 9e-07
Identities = 94/399 (23%), Positives = 120/399 (30%), Gaps = 63/399 (15%)
Query: 16 GQPGHPNTGGAAAHPTYHPMGHR--PRTCILLRGDQTTGGQAP-----SREISLGPWAAG 68
G P P+ GA P P + P +G T P S + P A
Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAP 1057
Query: 69 THFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP-----AM 123
T A +P G + PT P + G + P TP +
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117
Query: 124 RAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGL 183
P HKG P TP P P KG P+ PP+ TP P AP
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP---PPKGAPTT 1174
Query: 184 GPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAV-----GGDRTDIPSAIAAGPARTP- 237
P+ L+ KG P T AA GG T P PA TP
Sbjct: 1175 PAATPPSPKGGLATPSPKG--------APTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1226
Query: 238 -DRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVL 296
+ GL P P + +P G + P A
Sbjct: 1227 SPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA----------------- 1269
Query: 297 WTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASP 356
T +G PP + +V++ G P + A P PP SP
Sbjct: 1270 -TPPSLKGGLATPPHKGAPN--PAVVTPPSPKGGPATSPPKGAPTPPA--ATPPSPKGSP 1324
Query: 357 -EPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVT 394
PP GAP P P P + P G+P + A T
Sbjct: 1325 GTPPPKGAPTP--PAVTPPS--------PKGTPTLPATT 1353
Score = 51.2 bits (121), Expect = 2e-06
Identities = 99/407 (24%), Positives = 136/407 (33%), Gaps = 50/407 (12%)
Query: 18 PGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFLAISTT 77
PG G + P+ P+ C T A + S G +LA S +
Sbjct: 746 PGTKKVDGISHTSALAPVASSPKEC------PTEDSGASATASSKGTLT----YLADSPS 795
Query: 78 PWGRKTPACISELPTSSGTAQP------LANAVCEVQT--VPGPGLRPQGTPAMRAPSHK 129
P G PT G+A P L++ V V+ +P L QG+ A +H
Sbjct: 796 PLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHS 855
Query: 130 GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRP 189
TPP+P G P KGVT P P + P P AP P
Sbjct: 856 PTPPSPK--GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSM 913
Query: 190 ASG---RLLSLHLEKG-DGKGTRQRIPLTDAAV-----GGDRTDIPSAIAAGPARTPDR- 239
S + + KG + + P AA GG T P PA TP
Sbjct: 914 TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973
Query: 240 ---HGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVL 296
P P PTP + P GG A+ S + + + + G+ +
Sbjct: 974 KGGPATPSPKGAPTPPAAT-----PPSPKGGPATP-SPKGAPTPPAVTPPSPKGSPAATP 1027
Query: 297 WTGQLSRGWALLPPGDAGRHLETSVISAG---VAAGIWLVEPGEAAQD----PATRRTAP 349
+ S A PP G T + AA + + G A P P
Sbjct: 1028 FPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087
Query: 350 PRRTASPEPPAP-GAPLPACPGRIPGAARFGPRSCP-LGSPAVLAVT 394
P P P+P GAP+P P P + + G + P G+P A T
Sbjct: 1088 PSPKGGPATPSPKGAPMP--PAATPPSPKGGLATPPHKGAPTTPAAT 1132
Score = 51.2 bits (121), Expect = 2e-06
Identities = 109/416 (26%), Positives = 140/416 (33%), Gaps = 70/416 (16%)
Query: 16 GQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQ--APSREISLGPWAAGTHFLA 73
G P P GA P P L+G T AP+ + P G
Sbjct: 1253 GGPATPPPKGAPTPPAATPPS--------LKGGLATPPHKGAPNPAVVTPPSPKGG---P 1301
Query: 74 ISTTPWGRKTP-ACISELPTSS-GTAQPLANAVCEVQTVPGPGLRPQGTPAMRA--PSHK 129
++ P G TP A P S GT P T P P +GTP + A PS K
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSP----KGTPTLPATTPSSK 1357
Query: 130 GTPPTP-NPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPG---LGP 185
G P TP + GP P H GGP+ PP+ R P + +P L P
Sbjct: 1358 GGPTTPSSKEGPTPPAATPSH-----KGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP 1412
Query: 186 CGRPAS--GRLLSLHLEKGD------GKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTP 237
PA+ R + KGD + ++ P T A GG T PA TP
Sbjct: 1413 KKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTP 1472
Query: 238 DRHGLPIPGSTPTP---MVGSGRLGAPVGRSGGGA--------SARSSRPSCANVLLRAD 286
P P P P S AP + GA S+ P+ +
Sbjct: 1473 -----PSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPI 1527
Query: 287 ASLGTVLSVLWTGQLSRGWALLPPG-DAGRHLETSVI----------SAGVAAGIWLVEP 335
A T+LS L+ AL+PP +T I S+ A+ V P
Sbjct: 1528 APTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 336 GEAAQDPATRRTAPPRRTASPEP---PAPGAPLPACPGRIPGAARFGPRSCPLGSP 388
P+ + P SP P P P A P P + G A P+ P P
Sbjct: 1588 STYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK--GPATPAPKGTPTSPP 1641
Score = 50.1 bits (118), Expect = 4e-06
Identities = 84/366 (22%), Positives = 111/366 (30%), Gaps = 65/366 (17%)
Query: 77 TPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMR------------ 124
+P G TP+ ++ L T P V +P P P TPA +
Sbjct: 860 SPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGP-ATPAPKQAPALSMTSSSP 918
Query: 125 -----APSHKGTPPTPNP------------------------WGPEQPQNRHKHPKKGVT 155
P+ KG P +P+P W P P PK G
Sbjct: 919 KKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA 978
Query: 156 -----GGPSPP---PPAASRYGQTPGREPRVQAPGL---GPCGRPAS-----GRLLSLHL 199
G P+PP PP+ TP + P + P G PA+ G
Sbjct: 979 TPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAA 1038
Query: 200 EKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLG 259
KG+ PL A +PS GPA TP G P P + P S + G
Sbjct: 1039 TPPSPKGSPAATPLPKGAPTTPAATLPSP-KGGPA-TPSLKGAPTPPAATPP---SPKGG 1093
Query: 260 APVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLET 319
G ++ P L G + T +G PP G
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP-PKGAPTTP 1152
Query: 320 SVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPP-APGAPLPACPGRIPGAARF 378
+ G+ P A PA +P A+P P AP P P G A
Sbjct: 1153 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212
Query: 379 GPRSCP 384
P+ P
Sbjct: 1213 SPKGAP 1218
Score = 38.1 bits (87), Expect = 0.014
Identities = 87/375 (23%), Positives = 118/375 (31%), Gaps = 50/375 (13%)
Query: 50 TTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSS----------GTAQP 99
TT + + P+ GT LA P T + +PT+S T P
Sbjct: 661 TTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAP 720
Query: 100 LANAVCEVQ---TVPGPGLRPQGTP------------AMRAPSHKGTPPTPNPWGPEQPQ 144
LA V + +VP P L P GTP + AP P
Sbjct: 721 LATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASAT 780
Query: 145 NRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPG--LGPCGRPASGRLLSLHLEKG 202
K + PSP + S + P + P +G P S S E
Sbjct: 781 ASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENS 840
Query: 203 -DGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAP 261
+G++ T + P+ A P +P LP P TPTP V + P
Sbjct: 841 LSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPL-SPKGVTLP-PKETPTPSV----VNLP 894
Query: 262 VGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSV 321
+ G A P+ + + T S A PP +
Sbjct: 895 FPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPP---------AA 945
Query: 322 ISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAP-GAPLPACPGRIPGAARFGP 380
G P A PA PP P P+P GAP P P P + + GP
Sbjct: 946 TPPSPKGGPATPSPKWAPTPPA---ATPPSPKGGPATPSPKGAPTP--PAATPPSPKGGP 1000
Query: 381 RS-CPLGSPAVLAVT 394
+ P G+P AVT
Sbjct: 1001 ATPSPKGAPTPPAVT 1015
Score = 29.3 bits (64), Expect = 6.6
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
Query: 76 TTPWGRKTPACISE-----LPTSSGTAQPLANAVCEVQTVPGPG--LRPQGTPAMRAPSH 128
T P +KTPA + P+S + P A + P P L P PA+ +PS
Sbjct: 1554 TVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIP---PAVTSPSP 1610
Query: 129 KGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP 172
K PTP P P+ P G P+ PP S +P
Sbjct: 1611 KEA-PTPPAVTPPSPEKGPATP--APKGTPTSPPVTPSSLKDSP 1651
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 56.6 bits (135), Expect = 4e-08
Identities = 93/341 (27%), Positives = 116/341 (34%), Gaps = 83/341 (24%)
Query: 74 ISTTPWGRKTPACISEL----PTSSGTAQPLANAVCEVQTV----PGPGLRPQG------ 119
++TTP G + A S L P+ + A P A A PG G P G
Sbjct: 86 VATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGA 145
Query: 120 TPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPG------ 173
P+ P PPTP+P P P P PPPPA S Y T
Sbjct: 146 QPSAPPPPAPPLPPTPSP--PPPP--------------PPPPPPALSGYTTTNSGGGGSS 189
Query: 174 -----------REPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQR-IPLTDAA---V 218
R+ AP G P G E+ G G+ Q P +A +
Sbjct: 190 GKGHSRDFVLRRDLSATAPAAAMHGAPLGG-------EQRSGTGSPQHPAPPPHSAGMFI 242
Query: 219 GGDRTDIPSAIAAGPARTPDRHGLP-IPGSTPTPMVGSGRLGAPVGRSGGGAS--ARSSR 275
T + GPA P H P PG P P+ G RLG + A R+
Sbjct: 243 SASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQMRLGLAAAAAAAAAELYGRAEP 302
Query: 276 PSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEP 335
P DA G V + + AL G +L + +A AAG P
Sbjct: 303 PFAPR---SGDAHYGAVAA-------AAAAALHGYGAVNLNLNLAAAAAAAAAG-----P 347
Query: 336 GEAAQDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPGAA 376
G P + APP A P PPAP +PGAA
Sbjct: 348 G-----PHLQHHAPP--PAPPPPPAPAQHPHQHHPHLPGAA 381
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 50.4 bits (119), Expect = 3e-06
Identities = 94/377 (24%), Positives = 131/377 (34%), Gaps = 34/377 (9%)
Query: 30 PTYHPMGHRPRTCILLRGDQTTGGQAPSR-EISLGPWAAGTHFLAISTTPWGRKTPACIS 88
P P G RT + + + P R I+ P A + +P G TP+ S
Sbjct: 309 PRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTG--TPSRAS 366
Query: 89 ELPTSSGTAQPLANAVCEVQ-TVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRH 147
PT S + L T P P GTP+ + + K PP +P G +R
Sbjct: 367 --PTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRK--PPRASPTGM---LSRT 419
Query: 148 KHPKKGVTGGPSPPPPAASRYGQTPGREP-----RVQAPG----LGPCGRPASGRLLSLH 198
K T P+ PP AS G P P R G P G P++
Sbjct: 420 SITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTG-S 478
Query: 199 LEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRL 258
G+ R LT T + S A RTP R ST +P GS
Sbjct: 479 PSTASPTGSPSRASLTRTPSRASLTKMES--TASITRTPSRASPTWTPSTASP-TGSPST 535
Query: 259 GAPVGRSGGGASARS-SRPSCANVLLRADASLGTVLSVLWTGQ---LSRGWALLPPGDAG 314
+G A R+ SR S RA + + S+ T L+R +PP +
Sbjct: 536 ALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLTR----MPPSASP 591
Query: 315 RHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPG 374
+ + G+ + L + A T A P T P P + G P
Sbjct: 592 TGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPRASPTGTPPR 651
Query: 375 AARFG--PRSCPLGSPA 389
A+ G PR+ P G+P+
Sbjct: 652 ASPTGTPPRASPTGTPS 668
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 50.1 bits (118), Expect = 4e-06
Identities = 71/270 (26%), Positives = 91/270 (33%), Gaps = 62/270 (22%)
Query: 113 PGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP 172
P RP P P+ PP P+P P + + R K + G P PPP P
Sbjct: 713 PPRRPAAPPGPPGPA---APPAPSPAAPVRTRRRRKLYELHAAGAPPPPP---------P 760
Query: 173 GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAG 232
G P ++P RP SG G G G L A G D P ++
Sbjct: 761 GHAPAPESP------RPGSG--------SGSGPG------LAPARSPGPAADGPIDLSKK 800
Query: 233 PARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTV 292
P R P+PG+ P P + + R S S L S
Sbjct: 801 PRR-------PLPGA-PAPALADYH---------ECTACRVSFHSLEAYLAHKKYSCPAA 843
Query: 293 LSVLWTGQLSRGWALLPPGD--AGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAP- 349
G + PP G LE ++ G+ G L PG A+ PA R +P
Sbjct: 844 PPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRGPSPA 903
Query: 350 PRRTASPEP----------PAPGAPLPACP 369
P ASP+P P P P P P
Sbjct: 904 PAPAASPQPGSRGPRDGLGPEPQEPPPGPP 933
Score = 35.8 bits (81), Expect = 0.070
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 100 LANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTP---PTPNPWGPE-----QPQNRHKHPK 151
LA+ + + GPG+ + TPA R PS P P P GP +PQ P
Sbjct: 875 LAHGLLLGAPLAGPGVEAR-TPADRGPSPAPAPAASPQPGSRGPRDGLGPEPQEPPPGPP 933
Query: 152 KGVTGGPS--PPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSL 197
P PPPPA Y + P P P G RL ++
Sbjct: 934 PSPAAAPEAVPPPPAPPSYSDKGVQTPSKGTPAPLPNGNHRYCRLCNI 981
Score = 32.0 bits (71), Expect = 1.0
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 343 ATRRTAPPRRTASPE----PPAPGAPLPACPGR 371
A+R PPRR A+P P AP AP PA P R
Sbjct: 707 ASRHDPPPRRPAAPPGPPGPAAPPAPSPAAPVR 739
Score = 30.0 bits (66), Expect = 3.9
Identities = 69/273 (25%), Positives = 89/273 (32%), Gaps = 69/273 (25%)
Query: 8 PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSR-EISLGPWA 66
P CR C P+ H H G RP C++ TT ++ +
Sbjct: 295 PQCRKSC------PSASSLEIHMRSHS-GERPFVCLICLSAFTTKANCERHLKVHTDTLS 347
Query: 67 AGTHFLA-ISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPG-----LRP--- 117
H ISTT S L T+ QP + E+ + PG G L P
Sbjct: 348 GVCHSCGFISTT-----RDILYSHLVTNHMVCQPGSKG--EIYS-PGAGHPATKLPPDSL 399
Query: 118 ----QGTPAMRAP---SHKGTPPTPNPW----GPEQPQNRHKHPKKGVTGGPSPPPPAAS 166
Q A++ P + G PTP+P + N + G S PPAA
Sbjct: 400 GSFQQQHTALQGPLASADLGLAPTPSPGLDRKALAEATNGEARAEPLAQNGGSSEPPAAP 459
Query: 167 RYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIP 226
R + E AP LGP G P G +R P
Sbjct: 460 RSIKVEAVEEPEAAPILGP-GEP------------GPQAPSR----------------TP 490
Query: 227 SAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLG 259
S + PAR P PGS+P P G LG
Sbjct: 491 SPRSPAPARVKAELSSPTPGSSPVP----GELG 519
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 50.1 bits (118), Expect = 4e-06
Identities = 105/379 (27%), Positives = 136/379 (35%), Gaps = 81/379 (21%)
Query: 49 QTTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQ 108
Q + + PS ++ P A GT T PW T SE+P +Q +
Sbjct: 450 QVSEQEPPSTDVPPSPEAGGT------TGPWTSTT----SEVPRPPEPSQGPSTTSSGGG 499
Query: 109 TVPGPGLRPQGTPAMRAPSHKGTPPTPN-PWGPEQPQNRHKH------------PKKGVT 155
T P P P GT PPT + P GP +N H PK G T
Sbjct: 500 TGPHP---PSGTTLR--------PPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPG-T 547
Query: 156 GGPSPPPPAASRYGQ--TP-GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIP 212
P PP S Q TP G + PG P+ G S H G GT Q
Sbjct: 548 SQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTS-HQPATPGGGTAQTPE 606
Query: 213 LTDA-----AVGGDRTDIPSAIAAGPARTPDRH-GLPIPGSTPTPMVGSGRLGAPVGRSG 266
+ +G + P+ G A+TP+ P+P S TP S
Sbjct: 607 AGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMPLSKSTP-------------SS 653
Query: 267 GGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISA-- 324
GG + R S ++ A+LG VL L L G A+L G L+ A
Sbjct: 654 GGGPSEDKRFSVVDM-----AALGGVLGALLLLALL-GLAVLVHKHYGPRLKCCSGKAPE 707
Query: 325 ----GVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPLPACPG---RIPGAAR 377
G +L + +A P T P+ +P P P P PA PG P AAR
Sbjct: 708 PQPQGFDNQAFLPDH-KANWAPVPSPTHDPKPAEAPMPAEPAPPGPASPGGAPEPPAAAR 766
Query: 378 FGPRSCPLGSP-AVLAVTT 395
G GSP AV ++ T
Sbjct: 767 AG------GSPTAVRSILT 779
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 49.7 bits (117), Expect = 5e-06
Identities = 77/286 (26%), Positives = 97/286 (33%), Gaps = 61/286 (21%)
Query: 6 QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
Q PP +GG QP P P P G P+ G++ G P + GP
Sbjct: 58 QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 102
Query: 66 AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
G S +P ++P + P G QP Q P P +PQG P
Sbjct: 103 PQGDK----SRSP---RSPPGKPQGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 147
Query: 126 PSHKGTPPTPNPWGPEQPQNRHKH-------------PKKGVTGGPSPPPPAASRYGQTP 172
+G PP P GP PQ +K P +G PPPP G P
Sbjct: 148 NKPQGPPPPGKPQGP-PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Query: 173 --GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
G +P+ P P G P G S GK P GG++ P
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK------PQGPPPQGGNQPQGPPPPP 260
Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVG-RSGGGASARSSR 275
P P + G G P G P G GG+ +RSSR
Sbjct: 261 GKPQGPPPQGGNKPQGPPPP--------GKPQGPPPQGGSKSRSSR 298
Score = 47.0 bits (110), Expect = 3e-05
Identities = 71/271 (26%), Positives = 88/271 (32%), Gaps = 52/271 (19%)
Query: 6 QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
Q PP +GG QP P P P G P+ G++ G P + GP
Sbjct: 181 QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 225
Query: 66 AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
G + + +P G+ + P G QP Q P P +PQG P
Sbjct: 226 PQGDNKSQSARSPPGKP------QGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 271
Query: 126 PSHKGTPPTPNPWGPEQPQNRHKH-------------PKKGVTGGPSPPPPAASRYGQTP 172
+G PP P GP PQ K P +G PPPP G P
Sbjct: 272 NKPQGPPPPGKPQGP-PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330
Query: 173 --GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
G +P+ P P G P G S GK P G+ P A
Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGK------PQGPPQQEGNNPQGPPPPA 384
Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAP 261
G + P P P P G GR P
Sbjct: 385 GGNPQQPQAPPAGQPQGPPRPPQG-GRPSRP 414
Score = 40.0 bits (92), Expect = 0.004
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTP-NPWGPEQPQNRHKHPKKGVTGGPSPPPPAA- 165
Q P P +PQG P +G PP P P GP PQ +K G P PPP
Sbjct: 48 QGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGD 106
Query: 166 -SRYGQTPGREPRVQAP--GLGPCGRP 189
SR ++P +P+ P G P G P
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPP 133
Score = 37.0 bits (84), Expect = 0.032
Identities = 33/94 (35%), Positives = 35/94 (37%), Gaps = 21/94 (22%)
Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP--------PP 162
P G +PQG P S G P P P G QPQ P G GP P PP
Sbjct: 41 PQGGNKPQGPP-----SPPGKPQGPPPQGGNQPQG--PPPPPGKPQGPPPQGGNKPQGPP 93
Query: 163 PAASRYGQTP----GREPRVQAPGLGPCGRPASG 192
P G P R PR +P P G P G
Sbjct: 94 PPGKPQGPPPQGDKSRSPR--SPPGKPQGPPPQG 125
Score = 35.0 bits (79), Expect = 0.12
Identities = 50/202 (24%), Positives = 64/202 (31%), Gaps = 51/202 (25%)
Query: 6 QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
Q PP +GG QP P P P G P+ G++ G P + GP
Sbjct: 243 QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 287
Query: 66 AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
G S +P G+ + P G QP Q P P +PQG P
Sbjct: 288 PQGGSKSRSSRSPPGKP------QGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 333
Query: 126 PSHKGTPPTPNPWGP----------------------EQPQNRHKHPKKGVTGGPSPPPP 163
+G PP P GP +Q N + P G P P
Sbjct: 334 NKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 393
Query: 164 AASRYGQTPGREPRVQAPGLGP 185
+ Q P R P+ P P
Sbjct: 394 PPAGQPQGPPRPPQGGRPSRPP 415
Score = 34.7 bits (78), Expect = 0.16
Identities = 44/162 (27%), Positives = 54/162 (33%), Gaps = 26/162 (16%)
Query: 117 PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP--GR 174
PQG AP G P P P +PQ P +G PPPP G P G
Sbjct: 36 PQG-----APPQGGNKPQGPPSPPGKPQG---PPPQGGNQPQGPPPPPGKPQGPPPQGGN 87
Query: 175 EPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPA 234
+P+ P P G P G +K + P GG++ P P
Sbjct: 88 KPQGPPPPGKPQGPPPQG-------DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 140
Query: 235 RTPDRHGLPIPGSTPTPMVGSGRLGAPVG-RSGGGASARSSR 275
P + G G P G P G G +RSSR
Sbjct: 141 GPPPQGGNKPQGPPPP--------GKPQGPPPQGDNKSRSSR 174
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 48.9 bits (115), Expect = 8e-06
Identities = 43/156 (27%), Positives = 53/156 (33%), Gaps = 9/156 (5%)
Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASR 167
Q P P +PQG P +G PP P GP ++ + P+ PPP
Sbjct: 48 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKP 107
Query: 168 YGQTP--GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDI 225
G P G +P+ P P G PA G S GK P G+
Sbjct: 108 QGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGK------PQGPPQQEGNNPQG 161
Query: 226 PSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAP 261
P A G + P P P P G GR P
Sbjct: 162 PPPPAGGNPQQPQAPPAGQPQGPPRPPQG-GRPSRP 196
Score = 38.5 bits (88), Expect = 0.011
Identities = 46/171 (26%), Positives = 60/171 (35%), Gaps = 24/171 (14%)
Query: 8 PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAA 67
PP G G P P P G P+ GD++ ++P + P
Sbjct: 51 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ------GDKSRSPRSPPGKPQGPPPQG 104
Query: 68 GTHFLAISTTPWGRKTPACISELPTSSGTAQ-PLANAVCEVQTVPGPGLRPQGTPAMRAP 126
G P G P + P G Q P A + Q+ P +PQG P
Sbjct: 105 GK---PQGPPPQGGNKP----QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN 157
Query: 127 SHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPR 177
+ +G PP P P+QPQ P G GP PP G P R P+
Sbjct: 158 NPQG-PPPPAGGNPQQPQ----APPAGQPQGPPRPP-----QGGRPSRPPQ 198
Score = 37.7 bits (86), Expect = 0.019
Identities = 48/170 (28%), Positives = 61/170 (35%), Gaps = 19/170 (11%)
Query: 117 PQGTPAMRAPSHKGTPPTPN-PWGPEQPQNRHKHPKKGVTGGPSPPPPAA--SRYGQTPG 173
PQG +G PP P P GP PQ +K G P PPP SR ++P
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 94
Query: 174 REPRVQAP-GLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAG 232
+P+ P G P G P G K G + P A GG ++ +
Sbjct: 95 GKPQGPPPQGGKPQGPPPQGG------NKPQGPPPPGK-PQGPPAQGGSKSQSARSPPGK 147
Query: 233 PARTPDRHGLPIPGSTPTPMVGSGR------LGAPVGRSGGGASARSSRP 276
P P + G P P P G+ + G P G R SRP
Sbjct: 148 PQGPPQQEG-NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 196
Score = 35.0 bits (79), Expect = 0.12
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 108 QTVPGPGLRPQGTPAMR-APSHKGTPPTPNPWGPEQPQ-NRHKHPKKGVTGGPSPPPPAA 165
Q P PG +PQG PA + S P P GP Q + N + P G P P
Sbjct: 119 QGPPPPG-KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 177
Query: 166 SRYGQTPGREPRVQAPGLGP 185
+ Q P R P+ P P
Sbjct: 178 AGQPQGPPRPPQGGRPSRPP 197
Score = 29.3 bits (64), Expect = 6.6
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Query: 130 GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
G P P+P G +PQ P G P PPP Q P + Q P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPP-----GKPQGPPPQGGNKPQGPPPPGKPQGP 80
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.8 bits (112), Expect = 2e-05
Identities = 50/170 (29%), Positives = 61/170 (35%), Gaps = 15/170 (8%)
Query: 111 PGPGLRPQGTPAMRAPSH-KGTPPTPNPWGPEQPQNRH--KHPKKGVTGGPSPPPPAASR 167
PGPG P P H + P P P+QP HP+ P PPP +S+
Sbjct: 49 PGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSK 108
Query: 168 --YGQTPGREPRV-QAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTD 224
Q PG P V AP PA+ G G +T A G
Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPT 168
Query: 225 IPSAIAAGPARTPDRHGLP------IPGSTPTPMVGSGRLGAPVGRSGGG 268
PS +G TP + G P +PG P P G G G G+ GG
Sbjct: 169 PPS---SGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGG 215
Score = 45.4 bits (106), Expect = 9e-05
Identities = 39/138 (28%), Positives = 47/138 (34%), Gaps = 21/138 (15%)
Query: 87 ISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWG-PEQPQN 145
+ P +S +A P GPG P PA+ + PPTP G P P
Sbjct: 121 VGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180
Query: 146 RHKHPKKGVTGGPSPPPPAASRYGQTP-----------GREPRVQAPGLGPCGRPASGRL 194
GGP PPP A G P G+ P PG GP G
Sbjct: 181 ---------AGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHP 231
Query: 195 LSLHLEKGDGKGTRQRIP 212
H G+ +G RQ P
Sbjct: 232 KPPHRGGGEPRGGRQHHP 249
Score = 36.6 bits (83), Expect = 0.041
Identities = 41/135 (30%), Positives = 47/135 (34%), Gaps = 22/135 (16%)
Query: 63 GPWAAGTHFLAISTTPWGRKTPACISELPTSSG--TAQPLANAVCEVQT-VPGPGLRPQG 119
GP T A+++ P G P P SSG T P A VPGPG P+
Sbjct: 146 GPGPTPTPPPAVTSAPPGAPPPT-----PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
Query: 120 TPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP------PPPAASRYGQTPG 173
P P P P P G HPK GG P PP ++ Q P
Sbjct: 201 GPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGP- 259
Query: 174 REPRVQAPGLGPCGR 188
P GP GR
Sbjct: 260 -------PPGGPGGR 267
Score = 32.0 bits (71), Expect = 1.0
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 309 PPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRT--APPRRTASPEPPAPGAPLP 366
PP D+ + + G A G+ P ++ PAT T APP P P P A
Sbjct: 102 PPQDSSKPVVAQ--GPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTS 159
Query: 367 ACPGRIP 373
A PG P
Sbjct: 160 APPGAPP 166
Score = 30.8 bits (68), Expect = 2.3
Identities = 37/152 (24%), Positives = 42/152 (27%), Gaps = 38/152 (25%)
Query: 125 APSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
AP PP + P P P G P+PPP S PG
Sbjct: 118 APGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTS------------APPGAP 165
Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPI 244
P P+SG +P T GG P A GP P +
Sbjct: 166 PPTPPSSG------------------VPTTPPQAGGPPP--PPAAVPGPGPGPKQ----- 200
Query: 245 PGSTPTPMVGSGRLGAPVGRSGGGASARSSRP 276
G P G G P G G S P
Sbjct: 201 -GPGPGGPKGGKMPGGPKPGGGPGLSTPGGHP 231
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 47.4 bits (111), Expect = 2e-05
Identities = 66/246 (26%), Positives = 81/246 (32%), Gaps = 54/246 (21%)
Query: 131 TPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPA 190
+PPT P Q +HP GGP P ++ +G P R R GP G P
Sbjct: 53 SPPTVAPAASAGSQ---EHPG---AGGPLCFPARSAAWGP-PARASRAAGRRAGPAGPPC 105
Query: 191 SGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPT 250
R P A R+ P PA G S T
Sbjct: 106 -------------------RAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGT 146
Query: 251 PMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPP 310
V + RL P G + GA +R+ R + L R+ +S SR WA +P
Sbjct: 147 RSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSS-------------SRRWAAMPG 193
Query: 311 GDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAP-----GAPL 365
A R A G W V AA A APP + P A AP
Sbjct: 194 PGAPR---------PGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFRGWVAAPD 244
Query: 366 PAC-PG 370
P C PG
Sbjct: 245 PGCTPG 250
Score = 34.3 bits (77), Expect = 0.20
Identities = 46/149 (30%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 230 AAGPARTPDRHGLPIPGSTPTPMVG--SGRLGAPV---GRSGGGASARSSRPSCANVLLR 284
A GP P R P + + G +G G P GR A+ RS P A
Sbjct: 71 AGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPA 130
Query: 285 ADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPAT 344
G + G S LPP G L AG A L PG AA
Sbjct: 131 GVERAGGATAASSAGTRSVPARRLPPPCGGTSL-----GAGSRA---LRRPGSAA---LP 179
Query: 345 RRTAPPRRTASPEPPAPGAPLPACPGRIP 373
R + RR A+ P PGAP P PG P
Sbjct: 180 RSPSSSRRWAAM--PGPGAPRPGAPGTWP 206
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 47.4 bits (111), Expect = 2e-05
Identities = 72/240 (30%), Positives = 90/240 (37%), Gaps = 50/240 (20%)
Query: 159 SPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGD---GKGTRQRI---- 211
S P +S G P R + P C R G L LE+GD G G +
Sbjct: 677 SSPGEDSSSLGGGPSRRGPLPCP---LCSR--EGACSCLPLERGDAVAGWGGHPALGCPH 731
Query: 212 -PLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVG-----RS 265
P D+++ +R + A PA P P+ G+ G G AP R+
Sbjct: 732 PPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRA 791
Query: 266 GGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAG 325
+A PS A AS G+ LS S G PGD+G ET G
Sbjct: 792 PADPAASPDPPS-------AVASPGSGLS-------SPG---PKPGDSGYETETPFSPEG 834
Query: 326 VAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPL-PACPGRIPGAARFGPRSCP 384
G G AA++ PR A PEPP PGAP P PG +P GPR P
Sbjct: 835 AFPG------GGAAEEEGV-----PRPRAPPEPPDPGAPRPPPDPGPLPLP---GPREKP 880
Score = 41.6 bits (96), Expect = 0.001
Identities = 80/324 (24%), Positives = 99/324 (30%), Gaps = 53/324 (16%)
Query: 76 TTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTP 135
T PW + P + P S G A + + P L P+ S G P
Sbjct: 1050 TGPW--RAPGPWEKTPESWGPAPTIG------EPAPETSLERAPAPSAVVSSRNGGETAP 1101
Query: 136 NPWGPEQPQNRHKHP---KKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASG 192
P GP P+N P ++ G +P P A R G V G P G P SG
Sbjct: 1102 GPLGPA-PKNGTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPV-GTGTAPGGGPGSG 1159
Query: 193 RLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPM 252
+ + G TR + P P + P P R P P +
Sbjct: 1160 ----VDAKAGWVDNTRPQPP-------------PPPLPPPPEAQPRRLE-PAPPRARPEV 1201
Query: 253 VGSGRLGAPVGRSGG-------GASARSSR--PSCANVLLRADASLGTVLSVLWTGQLSR 303
G GAP R+GG G + R P + L G + +LSR
Sbjct: 1202 APEGEPGAPDSRAGGDTALSGDGDPPKPERKGPEMPRLFLDLGPPQGNSEQI--KARLSR 1259
Query: 304 GWALLP-------PGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASP 356
LP PG R AG A G E G A
Sbjct: 1260 LSLALPPLTLTPFPGPGPRRPPWEGADAGAAGG----EAGGAGAPGPAEEDGEDEDEDEE 1315
Query: 357 EPPAPGAPLPACPGRIPGAARFGP 380
E AP A R PG AR P
Sbjct: 1316 EDEEAAAPGAAAGPRGPGRARAAP 1339
Score = 34.3 bits (77), Expect = 0.20
Identities = 72/287 (25%), Positives = 96/287 (33%), Gaps = 66/287 (22%)
Query: 130 GTPPTP---NPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPC 186
G+PP P N W P P G P+P P A + P A L P
Sbjct: 575 GSPPEPLFPNDWDPLDP------------GVPAPQAPQAP--SEVPQLVSETWASPLFPA 620
Query: 187 GRP------ASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
RP ASG L + +G+G + + A V G+R G A +
Sbjct: 621 PRPFPAQSSASGSFLLSGWDP-EGRGAGETLAGDPAEVLGER---------GTAPWVEEE 670
Query: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRP--------SCANVLL-RADASLGT 291
GS+P G GGG S R P +C+ + L R DA G
Sbjct: 671 EEEEEGSSP---------GEDSSSLGGGPSRRGPLPCPLCSREGACSCLPLERGDAVAG- 720
Query: 292 VLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPR 351
W G + G P D+ E G A + + P A + P
Sbjct: 721 -----WGGHPALGCPHPPEDDSSLRAER-----GSLADLPMAPPASAPPEFLD----PLM 766
Query: 352 RTASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWS 398
A+P+ P G P P P A P + P AV + +G S
Sbjct: 767 GAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLS 813
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 47.0 bits (110), Expect = 3e-05
Identities = 74/296 (25%), Positives = 99/296 (33%), Gaps = 38/296 (12%)
Query: 84 PACISELPTSSGTAQPLAN-AVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQ 142
P C L +G P A + P P +P+ +PS PP P P P
Sbjct: 169 PTCARHLTLGTGDGGPAPPPAPSSASSSPSP------SPSSSSPSPPPPPPPPAPPAPPA 222
Query: 143 PQNRHKHPKKGVTGGPSPPPPAASRYG--QTPGREPRVQAPGLGPCGRPASGRLLSLHLE 200
P+ P SPPP +Y + G P A P E
Sbjct: 223 PRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEE 282
Query: 201 -KGDGKGTRQ---RIPLTDAAVGGDRT---DIPSAIAAGPARTPDRHGLPIPGSTPTPMV 253
+ + +G Q RI T A + D + D P + P P + P P P V
Sbjct: 283 DEEEEEGLSQSISRISETLAGIYDDNSLSQDFPGDESPRPDAQPTQ---PTPAPGTPPQV 339
Query: 254 GSGRLGAPVGRSGG--GASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPG 311
S R + R G A + R +V V+ G + LLPPG
Sbjct: 340 DSTRADGAMRRRVFVVGTEAEACREGKVSV------------EVVTAGGAALPPPLLPPG 387
Query: 312 DAGRHLETSVI---SAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAP 364
D+ +E I + L PG A P +A P P+PPAP AP
Sbjct: 388 DS--EIEEGEIVQPEEEPRLALSLFRPGGRAARPTPAASATPTAQPLPQPPAPRAP 441
Score = 31.2 bits (69), Expect = 1.7
Identities = 37/150 (24%), Positives = 53/150 (35%), Gaps = 46/150 (30%)
Query: 220 GDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCA 279
G+ D+ +A R DR +P+P + P + + R G V + SSRP+CA
Sbjct: 120 GESEDMLELVAE--VRIGDRDPIPLPVPSLLPRLRAWRTGKTVS-----PQSNSSRPTCA 172
Query: 280 NVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAA 339
L +LGT GD G + SA +
Sbjct: 173 RHL-----TLGT-------------------GDGGPAPPPAPSSAS----------SSPS 198
Query: 340 QDPATRRTAPPRRTASPEPPAPGAPLPACP 369
P++ +PP P PP P P P P
Sbjct: 199 PSPSSSSPSPP-----PPPPPPAPPAPPAP 223
Score = 30.8 bits (68), Expect = 2.3
Identities = 36/159 (22%), Positives = 52/159 (32%), Gaps = 11/159 (6%)
Query: 117 PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREP 176
P PA AP+ PPT E+ ++ + G P PPA + +
Sbjct: 499 PSPAPAP-APAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRS 557
Query: 177 RVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPART 236
R + P G AS + + TR+R TD GG R + R
Sbjct: 558 RDRKP-----GSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRS-----RSREKRR 607
Query: 237 PDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSR 275
R P +T + R GGG+ + R
Sbjct: 608 RRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKR 646
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 46.2 bits (108), Expect = 5e-05
Identities = 64/224 (28%), Positives = 89/224 (39%), Gaps = 45/224 (20%)
Query: 84 PACISELPTSSGTAQPLANAVCEVQTVPG------PGLRPQGTPAMRAPS--HKGT---P 132
P+ +LP ++G PL N C VQT G PG P+ A+ S H+ T P
Sbjct: 937 PSRTPKLPPTAGPRAPL-NIECFVQTPEGSCFPKKPGCLPRSEEAVVTASRNHEQTVLGP 995
Query: 133 PTPNPWGPEQPQNRHKHPKKGVTG----GPSPPPPAASRYGQTPGREPRVQAPGLGPCGR 188
+ N P QP H+ + V G GP P ++ +P + P+ + PG PC
Sbjct: 996 LSGNLMLPAQPP--HEGSVEQVGGERCRGPQSSGPVEAKQEDSPFQCPKEERPGGVPCMD 1053
Query: 189 PASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTP-DRHG-----L 242
L G Q +P + G T + ++ AGP TP +HG L
Sbjct: 1054 QGGCPL----------AGLSQEVPTMPSLPG---TGLTASPKAGPCSTPTSQHGSTATFL 1100
Query: 243 P-----IPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANV 281
P + S PT +G LG P A SS +CA V
Sbjct: 1101 PSEDQVLMSSAPTLHLG---LGTPTQSHPPETMATSSEGACAQV 1141
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 46.2 bits (108), Expect = 5e-05
Identities = 47/181 (25%), Positives = 61/181 (33%), Gaps = 28/181 (15%)
Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKK--GVTGGP------- 158
Q P P +PQG P +G PP P GP ++ + P+ G GP
Sbjct: 48 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQ 107
Query: 159 --SPPPPAASRYGQTP--GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLT 214
PPPP G P G P+ P P G P G +K + P
Sbjct: 108 PQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQG-------DKSRSPRSPPGKPQG 160
Query: 215 DAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSS 274
GG++ P P P + G G P G P G G +RSS
Sbjct: 161 PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPP--------GKPQGPPPQGDKSRSS 212
Query: 275 R 275
+
Sbjct: 213 Q 213
Score = 45.1 bits (105), Expect = 1e-04
Identities = 66/259 (25%), Positives = 81/259 (31%), Gaps = 46/259 (17%)
Query: 8 PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAA 67
PP G G P P P G P+ GD++ ++P + P
Sbjct: 112 PPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ------GDKSRSPRSPPGKPQGPPPQG 165
Query: 68 GTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP-----A 122
G P G P + P G +P Q P PG +PQG P +
Sbjct: 166 GNQ-------PQGPPPPPGKPQGPPPQGGKKP--------QGPPPPG-KPQGPPPQGDKS 209
Query: 123 MRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPG 182
+ S G P P P G QPQ GP PPP G +P+ P
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQ------------GPPPPPGKPQGPPPQGGNKPQGPPPP 257
Query: 183 LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGL 242
P G PA G S GK P G+ P A G + P
Sbjct: 258 GKPQGPPAQGGSKSQSARSPPGK------PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 311
Query: 243 PIPGSTPTPMVGSGRLGAP 261
P P P G GR P
Sbjct: 312 GQPQGPPRPPQG-GRPSRP 329
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/194 (27%), Positives = 68/194 (35%), Gaps = 36/194 (18%)
Query: 6 QKPPCRGGCW--------GQP-GHPNTGGAAAH---PTYHPMGHRPRTCILLRGDQTTGG 53
Q PP +GG G+P G P GG P P G P+ GD++
Sbjct: 159 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ------GDKSRSS 212
Query: 54 QAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGP 113
Q+P + P G P G P + P G +P Q P P
Sbjct: 213 QSPPGKPQGPPPQGGNQ-------PQGPPPPPGKPQGPPPQGGNKP--------QGPPPP 257
Query: 114 GLRPQGTPAMR-APSHKGTPPTPNPWGPEQPQ-NRHKHPKKGVTGGPSPPPPAASRYGQT 171
G +PQG PA + S P P GP Q + N + P G P P + Q
Sbjct: 258 G-KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 316
Query: 172 PGREPRVQAPGLGP 185
P R P+ P P
Sbjct: 317 PPRPPQGGRPSRPP 330
Score = 40.4 bits (93), Expect = 0.003
Identities = 50/201 (24%), Positives = 63/201 (31%), Gaps = 18/201 (8%)
Query: 6 QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGG--QAPSREISLG 63
Q PP G G P + + P P G P+ +G G Q P +
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189
Query: 64 PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAM 123
P P G K+ + S G N + Q P P +PQG P
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQ 246
Query: 124 RAPSHKGTPPTPNPWGP-----------EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP 172
+G PP P GP P + + P + P PPP A Q P
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306
Query: 173 GREPRVQAPGLGPCGRPASGR 193
P Q GP P GR
Sbjct: 307 QAPPAGQPQ--GPPRPPQGGR 325
Score = 31.6 bits (70), Expect = 1.3
Identities = 37/146 (25%), Positives = 47/146 (32%), Gaps = 27/146 (18%)
Query: 130 GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRP 189
G P P+P G +PQ P G P PPP G +P+ P P G P
Sbjct: 34 GNPQGPSPQGGNKPQGPPPPP-----GKPQGPPPQG-------GNKPQGPPPPGKPQGPP 81
Query: 190 ASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTP 249
G +K + P GG++ P P P + G G P
Sbjct: 82 PQG-------DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP 134
Query: 250 TPMVGSGRLGAPVGRSGGGASARSSR 275
G P G G +RS R
Sbjct: 135 P--------GKPQGPPPQGDKSRSPR 152
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 45.8 bits (107), Expect = 7e-05
Identities = 53/213 (24%), Positives = 75/213 (35%), Gaps = 21/213 (9%)
Query: 80 GRKTPACISELPTSSGTAQPLANAVCEVQTVPGP---GLRPQGTPAMRAPSHKGTPPT-- 134
GR T + +S+ P +G+ +N + VP G P + P + G P
Sbjct: 289 GRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAA 348
Query: 135 -PNPWGPE-QPQNRHKHPKKGVTGGPSP-----PPPAASRYGQTPGREPRVQAPGLGPCG 187
P+ GP+ P H +G P+P PPA S T R P VQ G G G
Sbjct: 349 PPSALGPKASPAPSHN------SGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGG 402
Query: 188 RPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGS 247
G S + G G G + + V ++ + + G + G P
Sbjct: 403 SGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPH 462
Query: 248 TPTPMVG-SGRLGAPVGRSG--GGASARSSRPS 277
P P AP G G G+ S PS
Sbjct: 463 NPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPS 495
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 45.4 bits (106), Expect = 9e-05
Identities = 73/321 (22%), Positives = 104/321 (32%), Gaps = 42/321 (13%)
Query: 56 PSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGL 115
P + S+ P + A P G P S + Q + V + G
Sbjct: 401 PGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGT 460
Query: 116 RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGRE 175
+P G P+ AP+ PP +Q P + V P+PP
Sbjct: 461 QPGGVPS--APTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP-------------- 504
Query: 176 PRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPAR 235
QA P G P SG L +G G GT + + + G P +A G
Sbjct: 505 ---QARPSHPGGPPVSGTL------QGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG--- 552
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
TP P P +T + G+ G + GG + P + L+ LG +L
Sbjct: 553 TPGMAPPPAP-ATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
Query: 296 LWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTAS 355
PG G + + I+ + G+ G AT+ PP
Sbjct: 612 AG------------PGAGGSGVASPTITVAMP-GVPAFLQGMTDFLQATQTAPPPPPPPP 658
Query: 356 PEPPAPGAPLPACPGRIPGAA 376
P PPAP PG G A
Sbjct: 659 PPPPAPEQQTMPPPGSPSGGA 679
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 45.4 bits (106), Expect = 9e-05
Identities = 73/321 (22%), Positives = 104/321 (32%), Gaps = 42/321 (13%)
Query: 56 PSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGL 115
P + S+ P + A P G P S + Q + V + G
Sbjct: 401 PGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGT 460
Query: 116 RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGRE 175
+P G P+ AP+ PP +Q P + V P+PP
Sbjct: 461 QPGGVPS--APTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP-------------- 504
Query: 176 PRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPAR 235
QA P G P SG L +G G GT + + + G P +A G
Sbjct: 505 ---QARPSHPGGPPVSGTL------QGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG--- 552
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
TP P P +T + G+ G + GG + P + L+ LG +L
Sbjct: 553 TPGMAPPPAP-ATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
Query: 296 LWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTAS 355
PG G + + I+ + G+ G AT+ PP
Sbjct: 612 AG------------PGAGGSGVASPTITVAMP-GVPAFLQGMTDFLQATQTAPPPPPPPP 658
Query: 356 PEPPAPGAPLPACPGRIPGAA 376
P PPAP PG G A
Sbjct: 659 PPPPAPEQQTMPPPGSPSGGA 679
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 45.4 bits (106), Expect = 9e-05
Identities = 73/321 (22%), Positives = 104/321 (32%), Gaps = 42/321 (13%)
Query: 56 PSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGL 115
P + S+ P + A P G P S + Q + V + G
Sbjct: 401 PGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGT 460
Query: 116 RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGRE 175
+P G P+ AP+ PP +Q P + V P+PP
Sbjct: 461 QPGGVPS--APTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP-------------- 504
Query: 176 PRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPAR 235
QA P G P SG L +G G GT + + + G P +A G
Sbjct: 505 ---QARPSHPGGPPVSGTL------QGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG--- 552
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
TP P P +T + G+ G + GG + P + L+ LG +L
Sbjct: 553 TPGMAPPPAP-ATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 611
Query: 296 LWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTAS 355
PG G + + I+ + G+ G AT+ PP
Sbjct: 612 AG------------PGAGGSGVASPTITVAMP-GVPAFLQGMTDFLQATQTAPPPPPPPP 658
Query: 356 PEPPAPGAPLPACPGRIPGAA 376
P PPAP PG G A
Sbjct: 659 PPPPAPEQQTMPPPGSPSGGA 679
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 45.4 bits (106), Expect = 9e-05
Identities = 73/321 (22%), Positives = 104/321 (32%), Gaps = 42/321 (13%)
Query: 56 PSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGL 115
P + S+ P + A P G P S + Q + V + G
Sbjct: 407 PGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGT 466
Query: 116 RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGRE 175
+P G P+ AP+ PP +Q P + V P+PP
Sbjct: 467 QPGGVPS--APTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP-------------- 510
Query: 176 PRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPAR 235
QA P G P SG L +G G GT + + + G P +A G
Sbjct: 511 ---QARPSHPGGPPVSGTL------QGAGLGTNASLAQMVSGLVGQLLMQPVLVAQG--- 558
Query: 236 TPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSV 295
TP P P +T + G+ G + GG + P + L+ LG +L
Sbjct: 559 TPGMAPPPAP-ATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGP 617
Query: 296 LWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTAS 355
PG G + + I+ + G+ G AT+ PP
Sbjct: 618 AG------------PGAGGSGVASPTITVAMP-GVPAFLQGMTDFLQATQTAPPPPPPPP 664
Query: 356 PEPPAPGAPLPACPGRIPGAA 376
P PPAP PG G A
Sbjct: 665 PPPPAPEQQTMPPPGSPSGGA 685
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 9e-05
Identities = 68/232 (29%), Positives = 87/232 (37%), Gaps = 52/232 (22%)
Query: 159 SPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAV 218
SPPPPA +R EP A G GP + GR H E G G G R+R
Sbjct: 104 SPPPPARARQENGMPEEPATTARG-GPGKAGSRGRFAG-HSEAGGGSGDRRR-------A 154
Query: 219 GGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
G ++ S +G + R P+ G P VG+ + P G + G A + RP
Sbjct: 155 GPEKRPKSSREGSGGPQESSRDKRPLSG----PDVGTPQ---PAGLASG-AKLAAGRPF- 205
Query: 279 ANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEA 338
N RAD T SRG A P D V G +AG G A
Sbjct: 206 -NTYPRAD-----------TDHPSRG-AQGEPHD--------VAPNGPSAG------GLA 238
Query: 339 AQDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAV 390
++ + PP R A GAP P G + P +C +PAV
Sbjct: 239 IPQSSSSSSRPPTR-------ARGAPSPGVLGPHASEPQLAPPACTPAAPAV 283
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 9e-05
Identities = 68/232 (29%), Positives = 87/232 (37%), Gaps = 52/232 (22%)
Query: 159 SPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAV 218
SPPPPA +R EP A G GP + GR H E G G G R+R
Sbjct: 104 SPPPPARARQENGMPEEPATTARG-GPGKAGSRGRFAG-HSEAGGGSGDRRR-------A 154
Query: 219 GGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
G ++ S +G + R P+ G P VG+ + P G + G A + RP
Sbjct: 155 GPEKRPKSSREGSGGPQESSRDKRPLSG----PDVGTPQ---PAGLASG-AKLAAGRPF- 205
Query: 279 ANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEA 338
N RAD T SRG A P D V G +AG G A
Sbjct: 206 -NTYPRAD-----------TDHPSRG-AQGEPHD--------VAPNGPSAG------GLA 238
Query: 339 AQDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAV 390
++ + PP R A GAP P G + P +C +PAV
Sbjct: 239 IPQSSSSSSRPPTR-------ARGAPSPGVLGPHASEPQLAPPACTPAAPAV 283
>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 9e-05
Identities = 68/232 (29%), Positives = 87/232 (37%), Gaps = 52/232 (22%)
Query: 159 SPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAV 218
SPPPPA +R EP A G GP + GR H E G G G R+R
Sbjct: 104 SPPPPARARQENGMPEEPATTARG-GPGKAGSRGRFAG-HSEAGGGSGDRRR-------A 154
Query: 219 GGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
G ++ S +G + R P+ G P VG+ + P G + G A + RP
Sbjct: 155 GPEKRPKSSREGSGGPQESSRDKRPLSG----PDVGTPQ---PAGLASG-AKLAAGRPF- 205
Query: 279 ANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEA 338
N RAD T SRG A P D V G +AG G A
Sbjct: 206 -NTYPRAD-----------TDHPSRG-AQGEPHD--------VAPNGPSAG------GLA 238
Query: 339 AQDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAV 390
++ + PP R A GAP P G + P +C +PAV
Sbjct: 239 IPQSSSSSSRPPTR-------ARGAPSPGVLGPHASEPQLAPPACTPAAPAV 283
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 45.1 bits (105), Expect = 1e-04
Identities = 59/218 (27%), Positives = 83/218 (38%), Gaps = 18/218 (8%)
Query: 144 QNRHKHPKKGV-----TGGPSPPPPAASRYGQTPGREP-RVQAPGLGPCGRPASGRLLSL 197
Q+ H H ++ + P PPPP G PG P A GL P P G L
Sbjct: 8 QHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHG----L 63
Query: 198 HLEKGDGKGTRQRIPLTDAAVGG----DRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMV 253
L +GDG P + V G T +AA P P G P P
Sbjct: 64 ALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPV-VPAVSTSSAAGVAPNP-A 121
Query: 254 GSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLG-TVLSVLWTGQLSRGWALLPPGD 312
GSG +P S +S+ SS S + L + + G + + L G G +
Sbjct: 122 GSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGTGVPAVSG 181
Query: 313 AGRHLETSVISAGVAAGIWLVEPGEA-AQDPATRRTAP 349
A R L + + V+ LV+ A+D A R+++P
Sbjct: 182 ALRELLEACRNGDVSRVKRLVDAANVNAKDMAGRKSSP 219
Score = 31.6 bits (70), Expect = 1.3
Identities = 31/130 (23%), Positives = 41/130 (31%), Gaps = 14/130 (10%)
Query: 62 LGPWAAGTHFLAISTTPWGRKTP-ACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
L P+A+ H LA+ R P S P + + +C V P
Sbjct: 53 LAPFASPRHGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPV-------V 105
Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPP------PPAASRYGQTPGR 174
PA+ S G P P G + P + PS P P A+ T
Sbjct: 106 PAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPL 165
Query: 175 EPRVQAPGLG 184
P PG G
Sbjct: 166 GPGAAGPGTG 175
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 45.1 bits (105), Expect = 1e-04
Identities = 71/273 (26%), Positives = 90/273 (32%), Gaps = 38/273 (13%)
Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASR 167
+T P PG +P+G P +G PP P PE P P +G PPP
Sbjct: 49 RTPPPPG-KPEGRPPQGGNQSQGPPPRPGK--PEGP------PPQGGNQSQGPPPRPGKP 99
Query: 168 YGQTP--GREPRVQAPGLG-PCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTD 224
GQ P G + + P G P G P G + G R P GG+++
Sbjct: 100 EGQPPQGGNQSQGPPPRPGKPEGPPPQGG------NQSQGPPPRPGKPEGPPPQGGNQSQ 153
Query: 225 IPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLR 284
P P P + G G P P G+ P + G + RP
Sbjct: 154 GPPPRPGKPEGPPPQGGNQSQGPPPHP----GKPEGPPPQGGNQSQGPPPRPGKP----E 205
Query: 285 ADASLGTVLSVLWTGQLSR-GWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPA 343
G S G R G PP G + G G P + P
Sbjct: 206 GPPPQGGNQS---QGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQG----PPPQEGNKP- 257
Query: 344 TRRTAPPRRTASPEPPA--PGAPLPACPGRIPG 374
+R PP R P PP P PLP G+ G
Sbjct: 258 -QRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Score = 42.7 bits (99), Expect = 6e-04
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQ 170
P PG +PQG P + PP P GP P + P G P PPP G
Sbjct: 241 PHPG-KPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQ--GG 297
Query: 171 TPGREPRVQAP 181
P R P+ Q P
Sbjct: 298 RPHRPPQGQPP 308
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 44.7 bits (104), Expect = 2e-04
Identities = 89/346 (25%), Positives = 108/346 (31%), Gaps = 82/346 (23%)
Query: 3 RTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISL 62
R +Q P G G GHP G P Y G L+G+ G P ++
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPG--------LQGEPGLPG--PPGPSAV 105
Query: 63 G-PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG-PGLR-PQG 119
G P G P+G K + LP G P +VPG PG + P G
Sbjct: 106 GKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTG 165
Query: 120 TPAMRA-PSHKGTPPTP--------------------------NPWGPEQPQNRHKHPKK 152
P R P KG P P P GP P K +
Sbjct: 166 APGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGEN 225
Query: 153 GVTGGP---------------SPP----------------PPAASRYGQ--TPGREPRVQ 179
GV G P PP P AA GQ PG +
Sbjct: 226 GVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPG 285
Query: 180 APGL-GPCGRPASGR--LLSLHLEKG-----DGKGTRQRIPLTDAAVGGDRTDIPSAIA- 230
APG+ GP G P G+ L L E+G G G + T P +
Sbjct: 286 APGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGP 345
Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRP 276
GP P HGLP P P +G GA R G+ + P
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYP 391
Score = 36.6 bits (83), Expect = 0.041
Identities = 49/166 (29%), Positives = 65/166 (39%), Gaps = 25/166 (15%)
Query: 84 PACISELPTSSGTAQPLANAVCEVQTVPG-PGLR-PQGTPAMRA-PSHKGTPPTPNPWGP 140
PA +P +G A P + PG PG R P G P + P KG P +P P GP
Sbjct: 426 PAGAKGMPGHNGEAGP--------RGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGP 477
Query: 141 EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLE 200
+ + G TG P PP P EP + P GP G P + ++
Sbjct: 478 AGIATKGLN---GPTGPPGPPGPRGH------SGEPGLPGPP-GPPGPPGQAVMPEGFIK 527
Query: 201 KGDGKGTRQRIPLTDAAVGGDRTDIP-SAIAAGPARTPDRHGLPIP 245
G + + PL A G T +P SA ++ G PIP
Sbjct: 528 AGQ-RPSLSGTPLVSANQG--VTGMPVSAFTVILSKAYPAIGTPIP 570
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 44.7 bits (104), Expect = 2e-04
Identities = 107/412 (25%), Positives = 134/412 (32%), Gaps = 67/412 (16%)
Query: 8 PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQA--PSREISLG-P 64
PP + G G PG P T G + +P LRG+ G A P + G P
Sbjct: 751 PPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPG----LRGEIGEQGLAGRPGEKGEAGLP 806
Query: 65 WAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG-PGLRPQGTPAM 123
A G + G K + L G A PG PG TP
Sbjct: 807 GAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPA-----GPPGLPGTTSLFTPHP 861
Query: 124 RAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTG--GPSPPPPAASRYGQ--TPGREPRVQ 179
R P +G P P P + G G GP+ PP A + G PG
Sbjct: 862 RMPGEQG--PKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPG 919
Query: 180 APGL----GPCGRPASGRLLSLHLEKG-DGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPA 234
APG GP G P S L G DG+ + A G + + P GP
Sbjct: 920 APGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEK------GAAGEEGSPGP----VGPR 969
Query: 235 RTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASAR-SSRPSCANVLLRADASLGTVL 293
P GLP P G G+ G P R G ++ +C V + +LG
Sbjct: 970 GDPGAPGLPGPP-------GKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALG--- 1019
Query: 294 SVLWTGQLSRGWALLP--PGDAGRHLETSVISAGVAAGIWLVEPGEAA------------ 339
GQ +G P PG G + + AG PG+
Sbjct: 1020 -----GQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSG--PPGDKGSPGSRGLPGFPG 1072
Query: 340 -QDPATRRTAPPRRTASPEPPAPGAPLPACPGRIPGAARFGPRSCPLGSPAV 390
Q PA R AP P PG PG I A+ CP G P +
Sbjct: 1073 PQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGL 1124
Score = 35.0 bits (79), Expect = 0.12
Identities = 86/314 (27%), Positives = 111/314 (35%), Gaps = 61/314 (19%)
Query: 113 PGLRPQGTPAMRAPSHKGTPPTPN---PWGPEQPQNRHKHP-KKGVTGGPSPPPPAASRY 168
PG R + + AM P +G P P GP+ PQ P K G G P P P+ +
Sbjct: 1287 PGPRGE-SGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTP- 1344
Query: 169 GQ--TPGREPRVQAPG-LGPCGRPASGRLLSLHLEKGD-GKGTRQRIPLTDAAVG--GDR 222
GQ + G PG LGP G P E G+ G ++ +P G G+R
Sbjct: 1345 GQKGSKGENGSPGLPGFLGPRGPPG---------EPGEKGVPGKEGVPGKPGEPGFKGER 1395
Query: 223 TDIPSAIAAGPARTPDRHGLP-IPG-STPTPMVGSGRL---GAPVGRSG-----GGASAR 272
D GP + G P IPG T ++G L PVG G G R
Sbjct: 1396 GDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLR 1455
Query: 273 SSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLP----------PGDAGRHLETSVI 322
PS + LG L +L+ A +P PG G + +
Sbjct: 1456 GESPSMETLRRLIQEELGKQLET----RLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP 1511
Query: 323 SAGVAAGIWLVEPGEAAQDPATRRTAP----PRRTASPEPPAPGAPL------PACPGR- 371
G EPG Q + P R A +P APG L P PG+
Sbjct: 1512 GRAGPMG----EPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQP 1567
Query: 372 -IPGAARFGPRSCP 384
PG A+ G P
Sbjct: 1568 GEPGYAKDGLPGIP 1581
Score = 32.0 bits (71), Expect = 1.0
Identities = 105/441 (23%), Positives = 133/441 (30%), Gaps = 91/441 (20%)
Query: 9 PCRGGCWGQPGHPNTGGAAAHPTYHPMGHR-----------PRTCIL---LRGDQTTGGQ 54
P + G GQ G P G A P G + P + + L+G+Q G
Sbjct: 610 PGKPGDTGQQGRPGPSGVAG-----PQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGP 664
Query: 55 APSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG-P 113
+ P A G P GR P + L G P PG P
Sbjct: 665 RGHQGAPGPPGARGP------IGPEGRDGPPGLQGLRGKKGDMGP-----------PGIP 707
Query: 114 GLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKK----GVTG-----GPSPPPPA 164
GL P P G P P P G P K G TG GP+ PP
Sbjct: 708 GLLGLQGP----PGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGP 763
Query: 165 ASRYGQ-----------TPGREPRVQAPGL-------GPCGRPASGRLLSLHLEKGDGKG 206
G+ PG + GL G G P + + EKGD +G
Sbjct: 764 PGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGD-QG 822
Query: 207 TRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIP-GSTPTPMVGSGRLGAP---- 261
+ + L + GDR + A AGP P L P P G G P
Sbjct: 823 EKGELGL--PGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPG 880
Query: 262 ----VGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHL 317
GR G + P A A + G + G + PPG G
Sbjct: 881 EPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPG 940
Query: 318 ETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPLPACPGR--IPGA 375
G E G A ++ + P +P APG P P G+ PG
Sbjct: 941 LRGTPGKDGERG----EKGAAGEEGSPGPVGP-----RGDPGAPGLPGPPGKGKDGEPGL 991
Query: 376 ARFGPRSCPLGSPAVLAVTTG 396
PLG+ A G
Sbjct: 992 RGSPGLPGPLGTKAACGKVRG 1012
Score = 31.2 bits (69), Expect = 1.7
Identities = 43/160 (26%), Positives = 54/160 (33%), Gaps = 29/160 (18%)
Query: 8 PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAA 67
PP G G+PG P GA P + GH GD G P
Sbjct: 1253 PPGEPGKAGEPGLPGPEGARGPPGF--KGH--------TGDSGAPGPRGESGAMGLPGQE 1302
Query: 68 GTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG-PGLRPQGTPAMR-A 125
G T P G + P P +G+ PG PG P GTP + +
Sbjct: 1303 GLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGS-----------PGEPG--PSGTPGQKGS 1349
Query: 126 PSHKGTPPTPNPWGPE----QPQNRHKHPKKGVTGGPSPP 161
G+P P GP +P + K+GV G P P
Sbjct: 1350 KGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEP 1389
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/206 (30%), Positives = 76/206 (36%), Gaps = 48/206 (23%)
Query: 79 WGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGT------- 131
W R+ + P S T PL N+V + PGL+ PA PS +G
Sbjct: 258 WERERRISSAAAPASVET--PL-NSVLGDSSASEPGLQAASQPA-ETPSQQGIVLGPLAP 313
Query: 132 -PPTPNPWGPEQ------PQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
PP P P GP Q P P + GP PPPP Q P P AP L
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPL- 372
Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTD--AAVGG---------DRTDIPS---AIA 230
PASG L+ E PLT AA+ G + T PS AI
Sbjct: 373 ----PASGFFLASMSE--------DNRPLTGLAAAIAGAKLRKVSRMEDTSFPSGGNAIG 420
Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSG 256
A + G G+ P P+ GSG
Sbjct: 421 VNSASSKTDTG---RGNGPLPLGGSG 443
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 43.9 bits (102), Expect = 3e-04
Identities = 63/206 (30%), Positives = 76/206 (36%), Gaps = 48/206 (23%)
Query: 79 WGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGT------- 131
W R+ + P S T PL N+V + PGL+ PA PS +G
Sbjct: 258 WERERRISSAAAPASVET--PL-NSVLGDSSASEPGLQAASQPA-ETPSQQGIVLGPLAP 313
Query: 132 -PPTPNPWGPEQ------PQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
PP P P GP Q P P + GP PPPP Q P P AP L
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPL- 372
Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTD--AAVGG---------DRTDIPS---AIA 230
PASG L+ E PLT AA+ G + T PS AI
Sbjct: 373 ----PASGFFLASMSE--------DNRPLTGLAAAIAGAKLRKVSRMEDTSFPSGGNAIG 420
Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSG 256
A + G G+ P P+ GSG
Sbjct: 421 VNSASSKTDTG---RGNGPLPLGGSG 443
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.135 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,669,937
Number of Sequences: 37866
Number of extensions: 1706619
Number of successful extensions: 15648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 1170
Number of HSP's that attempted gapping in prelim test: 9899
Number of HSP's gapped (non-prelim): 5779
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.