Guide to the Human Genome
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Name: ZNF442 Sequence: fasta or formatted (627aa) NCBI GI: 13540501
Description:

zinc finger protein 442

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         20           1
 C cysteine            7.0         44           2
 D aspartate           3.2         20           1
 E glutamate           8.6         54           2
 F phenylalanine       5.3         33           2
 G glycine             7.5         47           3
 H histidine           7.8         49           2
 I isoleucine          3.3         21           2
 K lysine              9.7         61           2
 L leucine             4.3         27           2
 M methionine          1.6         10           1
 N asparagine          1.8         11           1
 P proline             4.5         28           2
 Q glutamine           3.3         21           2
 R arginine            7.2         45           2
 S serine              7.8         49           3
 T threonine           6.7         42           2
 V valine              2.2         14           1
 W tryptophan          1.0          6           1
 Y tyrosine            4.0         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 442 
ZNF799                0.758   zinc finger protein 799 
ZNF443                0.756   zinc finger protein 443 
ZNF823                0.750   ZFP-36 for a zinc finger protein 
ZNF44                 0.725   zinc finger protein 44 
ZNF709                0.544   zinc finger protein 709 isoform a 
ZNF441                0.544   zinc finger protein 441 
ZNF563                0.530   zinc finger protein 563 
ZNF700                0.517   zinc finger protein 700 
ZNF14                 0.506   zinc finger protein 14 
ZNF433                0.505   zinc finger protein 433 
ZNF709                0.501   zinc finger protein 709 isoform b 
ZNF136                0.465   zinc finger protein 136 
ZNF791                0.456   zinc finger protein 791 
ZNF564                0.426   zinc finger protein 564 
ZNF627                0.425   zinc finger protein 627 
ZNF20                 0.425   zinc finger protein 20 
LOC729747             0.424   similar to zinc finger protein 709 
ZNF420                0.410   zinc finger protein 420 
ZNF555                0.403   zinc finger protein 555 
ZNF30                 0.402   zinc finger protein 30 isoform b 
ZNF30                 0.400   zinc finger protein 30 isoform a 
ZNF30                 0.400   zinc finger protein 30 isoform a 
ZNF699                0.396   zinc finger protein 699 
ZNF99                 0.390   zinc finger protein 99 
ZNF569                0.387   zinc finger protein 569 
LOC100292052          0.384   PREDICTED: similar to hCG1773661 
LOC100287226          0.384   PREDICTED: similar to hCG1773661 
LOC100287226          0.384   PREDICTED: hypothetical protein XP_002343677 
ZNF91                 0.381   zinc finger protein 91 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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