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Search of human proteins with 61658640
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61658640 interleukin 32 isoform D [Homo sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61658640 interleukin 32 isoform D [Homo sapiens] 377 e-105
gi|61658642 interleukin 32 isoform B [Homo sapiens] 370 e-103
gi|61658632 interleukin 32 isoform B [Homo sapiens] 370 e-103
gi|61639471 interleukin 32 isoform B [Homo sapiens] 370 e-103
gi|61639466 interleukin 32 isoform B [Homo sapiens] 370 e-103
gi|61658638 interleukin 32 isoform C [Homo sapiens] 326 7e-90
gi|61658636 interleukin 32 isoform C [Homo sapiens] 326 7e-90
gi|61658634 interleukin 32 isoform A [Homo sapiens] 214 2e-56
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.13
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 33 0.13
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 32 0.22
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens] 31 0.65
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 1.1
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 29 1.9
gi|42794760 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.5
gi|42794758 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.5
gi|42794756 acyl-CoA synthetase long-chain family member 5 isofo... 29 2.5
gi|51944950 phosducin-like 2 [Homo sapiens] 29 2.5
gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens] 28 4.2
gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo... 28 4.2
gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo... 28 4.2
gi|13375727 acyl-CoA synthetase short-chain family member 3 [Hom... 28 4.2
gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens] 28 5.5
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 28 5.5
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 28 5.5
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 28 5.5
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 28 5.5
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 28 5.5
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 28 5.5
gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens] 28 5.5
>gi|61658640 interleukin 32 isoform D [Homo sapiens]
Length = 179
Score = 377 bits (969), Expect = e-105
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL 60
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL 60
Query: 61 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 120
TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW
Sbjct: 61 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 120
Query: 121 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 179
VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 121 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 179
>gi|61658642 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 370 bits (949), Expect = e-103
Identities = 179/188 (95%), Positives = 179/188 (95%), Gaps = 9/188 (4%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 172 CSEPQSSK 179
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658632 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 370 bits (949), Expect = e-103
Identities = 179/188 (95%), Positives = 179/188 (95%), Gaps = 9/188 (4%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 172 CSEPQSSK 179
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639471 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 370 bits (949), Expect = e-103
Identities = 179/188 (95%), Positives = 179/188 (95%), Gaps = 9/188 (4%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 172 CSEPQSSK 179
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61639466 interleukin 32 isoform B [Homo sapiens]
Length = 188
Score = 370 bits (949), Expect = e-103
Identities = 179/188 (95%), Positives = 179/188 (95%), Gaps = 9/188 (4%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 120
Query: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
Sbjct: 121 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 180
Query: 172 CSEPQSSK 179
CSEPQSSK
Sbjct: 181 CSEPQSSK 188
>gi|61658638 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 326 bits (835), Expect = 7e-90
Identities = 159/179 (88%), Positives = 161/179 (89%), Gaps = 11/179 (6%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL 60
MCFPKVLSDDMKKLKARM + +DDFKEGYLETVAAYYEEQHPEL
Sbjct: 1 MCFPKVLSDDMKKLKARMVMS-----------SLAELEDDFKEGYLETVAAYYEEQHPEL 49
Query: 61 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 120
TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW
Sbjct: 50 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 109
Query: 121 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 179
VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 110 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
>gi|61658636 interleukin 32 isoform C [Homo sapiens]
Length = 168
Score = 326 bits (835), Expect = 7e-90
Identities = 159/179 (88%), Positives = 161/179 (89%), Gaps = 11/179 (6%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPEL 60
MCFPKVLSDDMKKLKARM + +DDFKEGYLETVAAYYEEQHPEL
Sbjct: 1 MCFPKVLSDDMKKLKARMVMS-----------SLAELEDDFKEGYLETVAAYYEEQHPEL 49
Query: 61 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 120
TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW
Sbjct: 50 TPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAW 109
Query: 121 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 179
VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Sbjct: 110 VKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK 168
>gi|61658634 interleukin 32 isoform A [Homo sapiens]
Length = 131
Score = 214 bits (546), Expect = 2e-56
Identities = 120/188 (63%), Positives = 121/188 (64%), Gaps = 66/188 (35%)
Query: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 51
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ DDFKEGYLETVAA
Sbjct: 1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 60
Query: 52 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE
Sbjct: 61 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGE------------------ 102
Query: 112 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 171
SFC +SYGAPRGDKEELTPQK
Sbjct: 103 -----------------------------SFCD----------KSYGAPRGDKEELTPQK 123
Query: 172 CSEPQSSK 179
CSEPQSSK
Sbjct: 124 CSEPQSSK 131
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 116 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 175
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 15/60 (25%)
Query: 116 GVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEP 175
G+LAW+ VV LV CC++S L+M + P+GD+E+L + + P
Sbjct: 7 GLLAWISRVVVLLV-----------LLCCAISVLYMLAC----TPKGDEEQLALPRANSP 51
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 32.3 bits (72), Expect = 0.22
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 45 YLETVAAYYEEQHPELTPLLEKERDGLRCR------GNRSPVPDVEDPATEEPGESFCDK 98
+ + A EE+ L L+++R +RCR + P+ PA G+S C +
Sbjct: 739 FFNSAVASAEEEQARLRGQLKEQR--VRCRRLAHLLASAQKEPEAAAPAPGTGGDSVCGE 796
Query: 99 VMRWFQAMLQRLQTWWHGVL---AWVKEKVVALVH 130
R Q +++LQ+ + ++ A +KE+V L H
Sbjct: 797 THRALQGAMEKLQSRFMELMQEKADLKERVEELEH 831
>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
Length = 4624
Score = 30.8 bits (68), Expect = 0.65
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 7 LSDDMKKLKARMHQAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPELTPLLEK 66
++ ++ LKA + R MQ+ + + + D K+ L+ V A YE+ E LLE
Sbjct: 3419 INKEVLPLKANLVVQENRHLLAMQDLQKAQAELDDKQAELDVVQAEYEQAMTEKQTLLE- 3477
Query: 67 ERDGLRCR 74
D RCR
Sbjct: 3478 --DAERCR 3483
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 30.0 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 50 AAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFC 96
+AY+ + E E+ +C G+R+P P++ P+T +P E C
Sbjct: 995 SAYFSDLEAEAEATSGPEK---KCGGDRAPGPELGLPSTGQPSEQVC 1038
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 29.3 bits (64), Expect = 1.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 65 EKERDGLRCRGNRSPVPDVE-DPATEEP 91
++E+D R RG+ SP DVE + TEEP
Sbjct: 349 DREKDSTRSRGSDSPAADVEIEYVTEEP 376
>gi|42794760 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794758 acyl-CoA synthetase long-chain family member 5 isoform
b [Homo sapiens]
Length = 683
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 334 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 364
>gi|42794756 acyl-CoA synthetase long-chain family member 5 isoform
a [Homo sapiens]
Length = 739
Score = 28.9 bits (63), Expect = 2.5
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 5 KVLSDDMKKLKARMHQAI----ERFYDKMQN 31
++L+DDMK LK + A+ R YDK+QN
Sbjct: 390 RLLADDMKTLKPTLFPAVPRLLNRIYDKVQN 420
>gi|51944950 phosducin-like 2 [Homo sapiens]
Length = 241
Score = 28.9 bits (63), Expect = 2.5
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 9 DDMKKLKARMH-QAIERFYDKMQNAESGRGQDDFKEGYLETVAAYYEEQHPELTPLLEKE 67
D+++++ R+ +A+ + ++KM A+ +D+F E ++ V Y +++ E L +K+
Sbjct: 28 DEIEEMVLRLQKEAMVKPFEKMTLAQLKEAEDEFDEEDMQAVETYRKKRLQEWKALKKKQ 87
Query: 68 RDG 70
+ G
Sbjct: 88 KFG 90
>gi|4506931 SH3-domain GRB2-like 2 [Homo sapiens]
Length = 352
Score = 28.1 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 14 LKARMHQAIERFYDKMQNAESGRGQDDFKE 43
LK + H+A ++ +K+ AE + DDFKE
Sbjct: 6 LKKQFHKATQKVSEKVGGAEGTKLDDDFKE 35
>gi|33519444 amiloride-sensitive cation channel 4 isoform 2 [Homo
sapiens]
Length = 647
Score = 28.1 bits (61), Expect = 4.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 60 LTPLLEKERDGLRCRGNRSPVPDVED 85
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|33519442 amiloride-sensitive cation channel 4 isoform 1 [Homo
sapiens]
Length = 666
Score = 28.1 bits (61), Expect = 4.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 60 LTPLLEKERDGLRCRGNRSPVPDVED 85
LT L K+RDG R G R P PD+ D
Sbjct: 266 LTGLPPKDRDGHRAAGLRYPEPDMVD 291
>gi|13375727 acyl-CoA synthetase short-chain family member 3 [Homo
sapiens]
Length = 686
Score = 28.1 bits (61), Expect = 4.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 6 VLSDDMKKLKARMHQAIERFYDKMQNAESG--RGQDDFKEGYLETVAAYYE 54
+L D+M+KLKAR I A SG + Q+ FK Y E YY+
Sbjct: 486 ILDDNMQKLKARCLGNIVVKLPLPPGAFSGLWKNQEAFKHLYFEKFPGYYD 536
>gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens]
Length = 552
Score = 27.7 bits (60), Expect = 5.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 30 QNAESGRGQD-DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPAT 88
+N E+ G + F +G + A Y ++ LE E +G CR + P ED +
Sbjct: 324 KNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE-ESEGCYCRSSGDPEQIKEDSLS 382
Query: 89 EEPGESFCDKVMRWFQAM 106
EE ++ ++ + QA+
Sbjct: 383 EESADARSFEMTEFNQAL 400
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 27.7 bits (60), Expect = 5.5
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 62 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 93
PL E ERDG VEDPA EPGE
Sbjct: 168 PLDESERDG-------GSEDQVEDPALSEPGE 192
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 27.7 bits (60), Expect = 5.5
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 7/32 (21%)
Query: 62 PLLEKERDGLRCRGNRSPVPDVEDPATEEPGE 93
PL E ERDG VEDPA EPGE
Sbjct: 132 PLDESERDG-------GSEDQVEDPALSEPGE 156
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 81 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 81 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 27.7 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 81 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 27.7 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 81 PDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 111
P+V PA E GES C + + Q +++LQ
Sbjct: 146 PEVAAPAPETGGESVCGETHQALQGAMEKLQ 176
>gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens]
Length = 474
Score = 27.7 bits (60), Expect = 5.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 30 QNAESGRGQD-DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPAT 88
+N E+ G + F +G + A Y ++ LE E +G CR + P ED +
Sbjct: 324 KNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE-ESEGCYCRSSGDPEQIKEDSLS 382
Query: 89 EEPGESFCDKVMRWFQAM 106
EE ++ ++ + QA+
Sbjct: 383 EESADARSFEMTEFNQAL 400
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,735,706
Number of Sequences: 37866
Number of extensions: 353743
Number of successful extensions: 1090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1056
Number of HSP's gapped (non-prelim): 44
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.