Guide to the Human Genome
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Name: FAM154B Sequence: fasta or formatted (398aa) NCBI GI: 60223083
Description:

hypothetical protein LOC283726

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         12           1
 C cysteine            2.5         10           1
 D aspartate           4.8         19           2
 E glutamate           6.0         24           2
 F phenylalanine       5.5         22           2
 G glycine             4.3         17           1
 H histidine           3.0         12           1
 I isoleucine          4.8         19           2
 K lysine              8.8         35           2
 L leucine             5.3         21           2
 M methionine          1.3          5           1
 N asparagine          3.0         12           2
 P proline            10.6         42           3
 Q glutamine           5.8         23           3
 R arginine            5.3         21           1
 S serine              7.8         31           2
 T threonine           6.0         24           2
 V valine              6.5         26           2
 W tryptophan          1.0          4           1
 Y tyrosine            4.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC283726 
FAM154A               0.256   hypothetical protein LOC158297 
MAP6                  0.010   microtubule-associated protein 6 isoform 2 
MAP6                  0.010   microtubule-associated protein 6 isoform 1 
C19orf45              0.009   hypothetical protein LOC374877 
CLDN15                0.007   claudin 15 
VPS13C                0.007   vacuolar protein sorting 13C protein isoform 2B [Hom...
VPS13C                0.007   vacuolar protein sorting 13C protein isoform 2A [Hom...
POF1B                 0.006   premature ovarian failure, 1B 
EPS8L2                0.006   epidermal growth factor receptor pathway substrate 8...
NRK                   0.006   Nik related kinase 
PBRM1                 0.006   polybromo 1 isoform 1 
PBRM1                 0.006   polybromo 1 isoform 4 
LOC100294236          0.005   PREDICTED: similar to diffuse panbronchiolitis crit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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