Guide to the Human Genome
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Name: HNMT Sequence: fasta or formatted (292aa) NCBI GI: 5901970
Description:

histamine N-methyltransferase isoform 1

Referenced in:

Histamine

Other entries for this name:
alt prot [51aa] histamine N-methyltransferase isoform 2
alt prot [126aa] histamine N-methyltransferase isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         14           1
 C cysteine            2.1          6           1
 D aspartate           6.8         20           2
 E glutamate           7.5         22           1
 F phenylalanine       5.1         15           2
 G glycine             6.2         18           3
 H histidine           2.1          6           1
 I isoleucine          6.8         20           2
 K lysine              8.6         25           2
 L leucine            10.6         31           2
 M methionine          3.4         10           1
 N asparagine          4.5         13           2
 P proline             2.7          8           2
 Q glutamine           4.5         13           1
 R arginine            2.4          7           2
 S serine              8.2         24           2
 T threonine           4.5         13           1
 V valine              4.1         12           2
 W tryptophan          1.7          5           1
 Y tyrosine            3.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histamine N-methyltransferase isoform 1 
HNMT                  0.184   histamine N-methyltransferase isoform 3 
HNMT                  0.130   histamine N-methyltransferase isoform 2 
DZIP1L                0.011   DAZ interacting protein 1-like 
MACF1                 0.009   microfilament and actin filament cross-linker protei...
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform a 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform b 
NDRG2                 0.007   N-myc downstream-regulated gene 2 isoform a 
TTC9                  0.007   tetratricopeptide repeat domain 9 
PLEC1                 0.007   plectin 1 isoform 11 
NT5DC1                0.005   5'-nucleotidase, cytosolic II-like 1 protein 
CCDC11                0.005   coiled-coil domain containing 11 
DHX57                 0.005   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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