Guide to the Human Genome
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Search of human proteins with 58219056

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58219056 methyltransferase like 10 [Homo sapiens]
         (291 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58219056 methyltransferase like 10 [Homo sapiens]                  593   e-170
gi|153945761 endothelin converting enzyme 2 isoform A [Homo sapi...    48   9e-06
gi|153945707 endothelin converting enzyme 2 isoform C [Homo sapi...    47   3e-05
gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]                    44   2e-04
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...    41   0.001
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                     38   0.009
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                     38   0.009
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...    38   0.009
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                     38   0.009
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi...    38   0.012
gi|112734863 methyltransferase like 12 [Homo sapiens]                  37   0.016
gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]                    37   0.020
gi|21361101 MAP kinase-interacting serine/threonine kinase 1 iso...    37   0.027
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi...    36   0.046
gi|119964690 glycogenin 2 isoform b [Homo sapiens]                     34   0.13 
gi|92859575 methyltransferase like 5 [Homo sapiens]                    34   0.13 
gi|62243734 signal transducing adaptor family member 2 isoform 1...    34   0.17 
gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]       34   0.17 
gi|224494572 hypothetical protein LOC401082 [Homo sapiens]             33   0.23 
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]        33   0.23 
gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens]         33   0.23 
gi|170932471 hypothetical protein LOC79703 [Homo sapiens]              33   0.39 
gi|239047498 slingshot 1 isoform 3 [Homo sapiens]                      32   0.50 
gi|239047441 slingshot 1 isoform 2 [Homo sapiens]                      32   0.50 
gi|30795190 Williams-Beuren syndrome chromosome region 27 [Homo ...    32   0.66 
gi|223556010 protein arginine methyltransferase 3 isoform 3 [Hom...    31   1.1  
gi|223556008 protein arginine methyltransferase 3 isoform 2 [Hom...    31   1.1  
gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo...    31   1.1  
gi|239048907 checkpoint with forkhead and ring finger domains is...    31   1.1  
gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens]      31   1.1  

>gi|58219056 methyltransferase like 10 [Homo sapiens]
          Length = 291

 Score =  593 bits (1529), Expect = e-170
 Identities = 291/291 (100%), Positives = 291/291 (100%)

Query: 1   MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWF 60
           MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWF
Sbjct: 1   MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWF 60

Query: 61  GEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGS 120
           GEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGS
Sbjct: 61  GEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGS 120

Query: 121 IIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRV 180
           IIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRV
Sbjct: 121 IIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRV 180

Query: 181 LKVKGFFLITSCNWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGT 240
           LKVKGFFLITSCNWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGT
Sbjct: 181 LKVKGFFLITSCNWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGT 240

Query: 241 HHHAWIIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSLAF 291
           HHHAWIIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSLAF
Sbjct: 241 HHHAWIIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSLAF 291


>gi|153945761 endothelin converting enzyme 2 isoform A [Homo
           sapiens]
          Length = 883

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 36  EHWDAVYERELQTFREYGDTGEI-WFGEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFL 94
           E+WD       Q ++   D+    WFG+ S  R +  ++    P D  +L +G GN    
Sbjct: 24  EYWD-------QRYQGAADSAPYDWFGDFSSFRAL--LEPELRPEDR-ILVLGCGNSALS 73

Query: 95  VELAKFGFSNITGIDYSPSAIQLSGSIIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKG 154
            EL   GF N+T +DY  S++ ++        +  ++ +  D   L    + F + ++KG
Sbjct: 74  YELFLGGFPNVTSVDY--SSVVVAAMQARHAHVPQLRWETMDVRKLDFPSASFDVVLEKG 131

Query: 155 TFDAISLNPDNAIEKRKQYVKSLSRVLKVKGF 186
           T DA+     +      + V ++ +VL   GF
Sbjct: 132 TLDALLAGERDPWTVSSEGVHTVDQVLSEVGF 163


>gi|153945707 endothelin converting enzyme 2 isoform C [Homo
           sapiens]
          Length = 255

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 20/161 (12%)

Query: 36  EHWDAVYERELQTFREYGDTGEI-WFGEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFL 94
           E+WD       Q ++   D+    WFG+ S  R +  ++    P D  +L +G GN    
Sbjct: 24  EYWD-------QRYQGAADSAPYDWFGDFSSFRAL--LEPELRPEDR-ILVLGCGNSALS 73

Query: 95  VELAKFGFSNITGIDYSPSAIQLSGSIIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKG 154
            EL   GF N+T +DY  S++ ++        +  ++ +  D   L    + F + ++KG
Sbjct: 74  YELFLGGFPNVTSVDY--SSVVVAAMQARHAHVPQLRWETMDVRKLDFPSASFDVVLEKG 131

Query: 155 TFDAISLN-------PDNAIEKRKQYVKSLSRVLKVKGFFL 188
           T DA+              +    Q +  +SRVL   G F+
Sbjct: 132 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFI 172


>gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]
          Length = 699

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 19/181 (10%)

Query: 33  GTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRWMQKHKIPLDASVLDIGTGNGV 92
           G+ ++W+       + F++ G     W+G  +   L   + K+  P +  VL IG GN  
Sbjct: 12  GSVDYWE-------KFFQQRGKKAFEWYG--TYLELCGVLHKYIKPRE-KVLVIGCGNSE 61

Query: 93  FLVELAKFGFSNITGIDYSPSAIQLSG--SIIEKEGLSNIKLKVEDFLNLSTQLSGFHIC 150
              +L   G+ +I  ID S   I+     +   +  +S +K+   D   +    + F + 
Sbjct: 62  LSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKM---DMTQMEFPDASFQVV 118

Query: 151 IDKGTFDAISLN-PDNAIEKRKQYVKSLSRVLKVKGFFLITSCNWTK--EELLNEFS-EG 206
           +DKGT DA+  +  +  +++  + +  + RVL+V G +L  S       ++ +  FS EG
Sbjct: 119 LDKGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQVGGRYLCISLAQAHILKKAVGHFSREG 178

Query: 207 W 207
           W
Sbjct: 179 W 179


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 23/44 (52%), Positives = 28/44 (63%)

Query: 246 IIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSL 289
           +IFVFL E  F HV QAGLELL SSD PT   +  G+   + S+
Sbjct: 31  LIFVFLVEMGFHHVGQAGLELLISSDLPTSASQSAGITDMKLSM 74


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 248 FVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSL 289
           FV L ET F HV QAGLELL S D PT   +  G+    + ARP L
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVL 395


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 248 FVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSL 289
           FV L ET F HV QAGLELL S D PT   +  G+    + ARP L
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVL 395


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 248 FVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSL 289
           FV L ET F HV QAGLELL S D PT   +  G+    + ARP L
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVL 395


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 248 FVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSL 289
           FV L ET F HV QAGLELL S D PT   +  G+    + ARP L
Sbjct: 350 FVVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVL 395


>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
           sapiens]
          Length = 440

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 19/35 (54%), Positives = 23/35 (65%)

Query: 248 FVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL 282
           ++FL ET F HV  AGLELL S D PT   + +GL
Sbjct: 406 YIFLVETGFHHVAHAGLELLISRDPPTSGSQSVGL 440


>gi|112734863 methyltransferase like 12 [Homo sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 25/205 (12%)

Query: 22  PGEDGFVPSALGTREHWDAVYER-ELQTFREYGDTGEIWFG-EESMNRLIRWMQKHKIPL 79
           P       S L  R  WD ++ +  L T      T + +FG +E    L+  +Q+ +   
Sbjct: 20  PFAGSLADSCLADRCLWDRLHAQPRLGTV----PTFDWFFGYDEVQGLLLPLLQEAQAAS 75

Query: 80  DASVLDIGTGNGVFLVELAKFGFS--NITGIDYSPSAIQLSGSIIEK----------EGL 127
              VLD+G G       L        ++ G+D+SP A+    S++E              
Sbjct: 76  PLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPA 135

Query: 128 SNIKLKVEDFLNLSTQLSG--FHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRVLKVKG 185
           S++     D  NL    S   F + +DKGT+DA++      + +  Q +    RVL  +G
Sbjct: 136 SSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAVA---RGGLPRAYQLLSECLRVLNPQG 192

Query: 186 FFLITSCNWTKEEL--LNEFSEGWS 208
             +  S       L  L + S GW+
Sbjct: 193 TLIQFSDEDPDVRLPCLEQGSYGWT 217


>gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]
          Length = 543

 Score = 37.0 bits (84), Expect = 0.020
 Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 33  GTREHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRWMQKHKIPLDASVLDIGTGNGV 92
           G+ ++W+       + F++ G     W+G  +   L   + K+  P +  VL IG GN  
Sbjct: 12  GSVDYWE-------KFFQQRGKKAFEWYG--TYLELCGVLHKYIKPRE-KVLVIGCGNSE 61

Query: 93  FLVELAKFGFSNITGIDYSPSAIQLSG--SIIEKEGLSNIKLKVEDFLNLSTQLSGFHIC 150
              +L   G+ +I  ID S   I+     +   +  +S +K+   D   +    + F + 
Sbjct: 62  LSEQLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKM---DMTQMEFPDASFQVV 118

Query: 151 IDKGTFDAISLN-PDNAIEKRKQYVKSLSRVLK 182
           +DKGT DA+  +  +  +++  + +  + RVL+
Sbjct: 119 LDKGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQ 151


>gi|21361101 MAP kinase-interacting serine/threonine kinase 1
           isoform 1 [Homo sapiens]
          Length = 465

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 20/37 (54%), Positives = 23/37 (62%)

Query: 206 GWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGTHH 242
           GWS +A   LTAA TS   +   TSAS+V GTTG  H
Sbjct: 173 GWSAMAPSGLTAAPTSLGSSDPPTSASQVAGTTGIAH 209


>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
           sapiens]
          Length = 167

 Score = 35.8 bits (81), Expect = 0.046
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 249 VFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSL 289
           V L +T  C++ QAGLELL SSD P    +  G+    +H +P+L
Sbjct: 118 VVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPAL 162


>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
          Length = 501

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 251 LAETRFCHVVQAGLELLGSSDSPTWPPKVLGL 282
           ++ET F H  QAGLELL SS+SPT   +  G+
Sbjct: 1   MSETEFHHGAQAGLELLRSSNSPTSASQSAGM 32


>gi|92859575 methyltransferase like 5 [Homo sapiens]
          Length = 209

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 83  VLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSIIEKEGLSNIKLKVEDFLNLST 142
           V D+G G GV  +  A  G     G D    A+++     E+  L+NI +   D   LS 
Sbjct: 55  VADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNAEEFELTNIDMVQCDVCLLSN 114

Query: 143 QLSGFHICIDKGTFDAISLNPDNAIEKRK 171
           ++S         +FD + +NP    +  K
Sbjct: 115 RMS--------KSFDTVIMNPPFGTKNNK 135


>gi|62243734 signal transducing adaptor family member 2 isoform 1
           [Homo sapiens]
          Length = 449

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 253 ETRFCHVVQAGLELLGSSDSPTWPPKVLGL----YHARPSLA 290
           E  F HV QAGLELL SSD PT   +  G+    +H  P L+
Sbjct: 359 EKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLS 400



 Score = 28.5 bits (62), Expect = 7.3
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)

Query: 229 TSASRVGGTTGTHHHAWIIFVFLAETRFCHVVQAGL--ELLGSSDSPTWP 276
           TSAS+  G TG  HH W     L E +   V   GL  +L  SS  P +P
Sbjct: 380 TSASQSAGITGVSHHTWPHLSSLPEPK---VFNGGLGRKLPVSSAQPLFP 426


>gi|219689113 two pore segment channel 1 isoform 1 [Homo sapiens]
          Length = 888

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 14/18 (77%), Positives = 16/18 (88%)

Query: 257 CHVVQAGLELLGSSDSPT 274
           C++ QAGLELLGSS SPT
Sbjct: 4   CYIAQAGLELLGSSSSPT 21


>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
          Length = 95

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)

Query: 258 HVVQAGLELLGSSDSPT---WPPKVLGLYHARPSL 289
           +V QAGLELLGSS+SPT         GL+H  P +
Sbjct: 19  YVAQAGLELLGSSNSPTSAYQAAGTTGLHHCTPPI 53


>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
          Length = 558

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 18/32 (56%), Positives = 20/32 (62%)

Query: 251 LAETRFCHVVQAGLELLGSSDSPTWPPKVLGL 282
           L ET F HV QAGLELL S D PT   +  G+
Sbjct: 235 LLETVFHHVSQAGLELLTSGDLPTLASQSAGI 266


>gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens]
          Length = 394

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 80  DASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSIIEKEGLSNI----KLKVE 135
           D  VLD+G+G G+  +  AK G   + GI+ S S    S  II+   L NI    K KVE
Sbjct: 112 DKVVLDVGSGTGILSMFAAKAGAKKVFGIECS-SISDYSEKIIKANHLDNIITIFKGKVE 170

Query: 136 D 136
           +
Sbjct: 171 E 171


>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
          Length = 677

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 230 SASRVGGTTGTHHHAWIIFVFLAETRF 256
           S  RV G T  HHHAW+I V  A + F
Sbjct: 138 SVPRVAGITDAHHHAWLIMVASAGSLF 164


>gi|239047498 slingshot 1 isoform 3 [Homo sapiens]
          Length = 703

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 193 NWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGTHHHAWIIFVF 250
           N +K    N    G +  AG W T +L S +   + TSAS VG TTGT HH  +IF +
Sbjct: 631 NNSKRSCPNGMEVGRARPAG-WHTPSLPSHSN--WPTSASVVG-TTGTRHHTQLIFFY 684


>gi|239047441 slingshot 1 isoform 2 [Homo sapiens]
          Length = 692

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 193 NWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGTHHHAWIIFVF 250
           N +K    N    G +  AG W T +L S +   + TSAS VG TTGT HH  +IF +
Sbjct: 620 NNSKRSCPNGMEVGRARPAG-WHTPSLPSHSN--WPTSASVVG-TTGTRHHTQLIFFY 673


>gi|30795190 Williams-Beuren syndrome chromosome region 27 [Homo
           sapiens]
          Length = 245

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 78  PLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQ 116
           P  A +LD+  G G+   EL   GF  + G+D SP  ++
Sbjct: 66  PHSALILDVACGTGLVAAELRAPGFLQLHGVDGSPGMLE 104


>gi|223556010 protein arginine methyltransferase 3 isoform 3 [Homo
           sapiens]
          Length = 454

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 35  REHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRW-------MQKHKIPLDASVLDIG 87
           +E  D VY      F  YG  G     EE +   IR         Q   I  D  VLD+G
Sbjct: 136 QEDEDGVY------FSSYGHYG---IHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVG 186

Query: 88  TGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSI-IEK--EGLSNIKLKVED 136
            G G+  +  AK G   + G+D S    Q    I + K  + ++ IK K+E+
Sbjct: 187 CGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE 238


>gi|223556008 protein arginine methyltransferase 3 isoform 2 [Homo
           sapiens]
          Length = 469

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 35  REHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRW-------MQKHKIPLDASVLDIG 87
           +E  D VY      F  YG  G     EE +   IR         Q   I  D  VLD+G
Sbjct: 151 QEDEDGVY------FSSYGHYG---IHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVG 201

Query: 88  TGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSI-IEK--EGLSNIKLKVED 136
            G G+  +  AK G   + G+D S    Q    I + K  + ++ IK K+E+
Sbjct: 202 CGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE 253


>gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo
           sapiens]
          Length = 531

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 19/112 (16%)

Query: 35  REHWDAVYERELQTFREYGDTGEIWFGEESMNRLIRW-------MQKHKIPLDASVLDIG 87
           +E  D VY      F  YG  G     EE +   IR         Q   I  D  VLD+G
Sbjct: 213 QEDEDGVY------FSSYGHYG---IHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVG 263

Query: 88  TGNGVFLVELAKFGFSNITGIDYSPSAIQLSGSI-IEK--EGLSNIKLKVED 136
            G G+  +  AK G   + G+D S    Q    I + K  + ++ IK K+E+
Sbjct: 264 CGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE 315


>gi|239048907 checkpoint with forkhead and ring finger domains
           isoform 4 [Homo sapiens]
          Length = 623

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/18 (77%), Positives = 15/18 (83%)

Query: 257 CHVVQAGLELLGSSDSPT 274
           C V QAGL+LLGSSD PT
Sbjct: 139 CCVAQAGLKLLGSSDPPT 156


>gi|35493725 vacuolar protein sorting 13B isoform 3 [Homo sapiens]
          Length = 863

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 194 WTKEELLNEFSEGWSTVAGFWL--TAALTSWAQAIFSTSASRVGGTTGTHHHAWIIFVFL 251
           WTK   +   +EG   +    +  T A T   QAI+ + +     ++     A I  +FL
Sbjct: 778 WTKRSQI-AITEGIFELPNLTIQATRAQTLLLQAIYQSWSHLGNVSSSAVIEALINEIFL 836

Query: 252 A-ETRFCHVVQAGLELLGSSDSPT 274
           + E   C+V Q  LELL S+D PT
Sbjct: 837 SIEIGSCYVAQVDLELLASNDPPT 860


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,127,698
Number of Sequences: 37866
Number of extensions: 478899
Number of successful extensions: 1505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1448
Number of HSP's gapped (non-prelim): 69
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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