Guide to the Human Genome
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Name: ARMCX6 Sequence: fasta or formatted (300aa) NCBI GI: 57546906
Description:

armadillo repeat containing, X-linked 6

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt mRNA [300aa] armadillo repeat containing, X-linked 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         24           2
 C cysteine            3.3         10           2
 D aspartate           5.7         17           3
 E glutamate           9.0         27           3
 F phenylalanine       4.0         12           1
 G glycine             8.3         25           3
 H histidine           1.0          3           1
 I isoleucine          4.7         14           1
 K lysine              5.0         15           1
 L leucine             9.7         29           2
 M methionine          3.7         11           1
 N asparagine          5.0         15           2
 P proline             6.3         19           1
 Q glutamine           3.7         11           2
 R arginine            4.3         13           1
 S serine              7.3         22           1
 T threonine           4.0         12           1
 V valine              3.7         11           1
 W tryptophan          2.0          6           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   armadillo repeat containing, X-linked 6 
ARMCX6                1.000   armadillo repeat containing, X-linked 6 
LOC653354             0.573   PREDICTED: similar to armadillo repeat containing, ...
LOC653354             0.573   PREDICTED: similar to armadillo repeat containing, ...
LOC653354             0.538   PREDICTED: similar to armadillo repeat containing, ...
ARMCX3                0.254   armadillo repeat containing, X-linked 3 
ARMCX3                0.254   armadillo repeat containing, X-linked 3 
ARMCX3                0.254   armadillo repeat containing, X-linked 3 
ARMC10                0.168   SVH protein isoform a 
ARMCX2                0.136   ALEX2 protein 
ARMCX2                0.136   ALEX2 protein 
ARMCX1                0.123   armadillo repeat containing, X-linked 1 
ARMC10                0.113   SVH protein isoform b 
LOC100292655          0.079   PREDICTED: similar to armadillo repeat containing, ...
ARMC10                0.071   SVH protein isoform c 
ARMC10                0.062   SVH protein isoform e 
LOC389137             0.062   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.059   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.059   PREDICTED: similar to SVH protein isoform 2 
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.059   basic helix-loop-helix domain containing, class B, 9...
ARMCX5                0.050   armadillo repeat containing, X-linked 5 
ARMC10                0.047   SVH protein isoform f 
ARMC10                0.047   SVH protein isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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