Guide to the Human Genome
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Search of human proteins with 57529131

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]
         (648 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]             1311   0.0  
gi|122937185 hypothetical protein LOC57189 [Homo sapiens]              45   2e-04
gi|34577075 peroxisomal acyl-CoA thioesterase 1 isoform a [Homo ...    39   0.015
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                38   0.025
gi|116292178 hypothetical protein LOC414918 [Homo sapiens]             37   0.043
gi|32698777 hypothetical protein LOC201627 [Homo sapiens]              35   0.17 
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]    33   0.82 
gi|38788219 zinc finger protein 428 [Homo sapiens]                     33   1.1  
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    32   1.4  
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    32   1.4  
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    32   1.4  
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    32   1.8  
gi|14150098 transmembrane protein 79 [Homo sapiens]                    32   1.8  
gi|156151443 alpha-kinase 1 [Homo sapiens]                             32   1.8  
gi|156151441 alpha-kinase 1 [Homo sapiens]                             32   1.8  
gi|239582765 ral guanine nucleotide dissociation stimulator-like...    31   3.1  
gi|239582763 ral guanine nucleotide dissociation stimulator-like...    31   3.1  
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]          30   5.3  
gi|191250771 spire homolog 1 isoform b [Homo sapiens]                  30   5.3  
gi|191250775 spire homolog 1 isoform c [Homo sapiens]                  30   5.3  
gi|191250773 spire homolog 1 isoform a [Homo sapiens]                  30   5.3  
gi|126723547 hypothetical protein LOC57523 [Homo sapiens]              30   5.3  
gi|4885243 FOS-like antigen 1 [Homo sapiens]                           30   6.9  
gi|24797114 calcium-binding tyrosine phosphorylation-regulated p...    30   6.9  
gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]         30   6.9  
gi|24797108 calcium-binding tyrosine phosphorylation-regulated p...    30   9.1  

>gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]
          Length = 648

 Score = 1311 bits (3392), Expect = 0.0
 Identities = 648/648 (100%), Positives = 648/648 (100%)

Query: 1   MEKARRGGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFL 60
           MEKARRGGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFL
Sbjct: 1   MEKARRGGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFL 60

Query: 61  ALPDGAHNYQEDTVFFHLPPRNGNGATVFGISCYRQIEAKALKVRQADITRETVQKSVCV 120
           ALPDGAHNYQEDTVFFHLPPRNGNGATVFGISCYRQIEAKALKVRQADITRETVQKSVCV
Sbjct: 61  ALPDGAHNYQEDTVFFHLPPRNGNGATVFGISCYRQIEAKALKVRQADITRETVQKSVCV 120

Query: 121 LSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSP 180
           LSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSP
Sbjct: 121 LSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSP 180

Query: 181 RDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLSDCSQYR 240
           RDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLSDCSQYR
Sbjct: 181 RDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLSDCSQYR 240

Query: 241 PRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKTEEPLFQV 300
           PRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKTEEPLFQV
Sbjct: 241 PRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKTEEPLFQV 300

Query: 301 EDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPK 360
           EDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPK
Sbjct: 301 EDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPK 360

Query: 361 DSVPSESLPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHL 420
           DSVPSESLPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHL
Sbjct: 361 DSVPSESLPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHL 420

Query: 421 LSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYL 480
           LSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYL
Sbjct: 421 LSDVTVRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFADYL 480

Query: 481 VRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKILSDYGTTFVTAW 540
           VRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKILSDYGTTFVTAW
Sbjct: 481 VRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKILSDYGTTFVTAW 540

Query: 541 KNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTS 600
           KNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTS
Sbjct: 541 KNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQNSERGKKIGNVMVTTS 600

Query: 601 RNVVQTGKAVGQSVGGAFSSAKTAMSSWLSTFTTSTSQSLTEPPDEKP 648
           RNVVQTGKAVGQSVGGAFSSAKTAMSSWLSTFTTSTSQSLTEPPDEKP
Sbjct: 601 RNVVQTGKAVGQSVGGAFSSAKTAMSSWLSTFTTSTSQSLTEPPDEKP 648


>gi|122937185 hypothetical protein LOC57189 [Homo sapiens]
          Length = 455

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 48/221 (21%)

Query: 11  VPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQ 70
           V    V+ + VV F  + G  VE+  P  I  +G            + F ++  G+H  Q
Sbjct: 72  VEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEG------------VEFKSMASGSHKIQ 119

Query: 71  EDTVFFHLPPRNGNGATVFGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLL 130
            D ++F   P        FG++C+  +        ++++ R    KSV +LS  P Y LL
Sbjct: 120 SDFIYFRKGP-------FFGLACFANMPV------ESELERGARMKSVGILS--PSYTLL 164

Query: 131 QAKLQLITHAYFEEKDF-SQISILKELYEHMNSSLGGASLEGS---------QVYLGLSP 180
              +  + +    + +     S L   YE     L      GS          ++  + P
Sbjct: 165 YRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGSSLPPVYWLPSIHRYMYP 224

Query: 181 RDLVLH-----------FRHKVLILFKLILLEKKVLFYISP 210
              + H           F  ++LIL+K  LL K++L +  P
Sbjct: 225 EMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPP 265


>gi|34577075 peroxisomal acyl-CoA thioesterase 1 isoform a [Homo
           sapiens]
          Length = 319

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 276 TIRKVMAGNHGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLD 335
           ++R V A  HG+        P+F  + S +  +P+        P+ P P+    D ETL 
Sbjct: 108 SVRSVKAVQHGK--------PIFICQASFQQAQPSPMQHQFSMPTVPPPEEL-LDCETLI 158

Query: 336 PSVLEDPNLKEREQLGSDQTNLFPKDSVPSESLPITVQP 374
              L DPNL++R  L     N      VP E  P+   P
Sbjct: 159 DQYLRDPNLQKRYPLA---LNRIAAQEVPIEIKPVNPSP 194


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 18/191 (9%)

Query: 287 EDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDP-NLK 345
           +D  +K  EPL + E     +      Q    P++PS   ++ + E   PS+ ++P    
Sbjct: 267 DDEKVKKNEPLHEKEAKDDSKTKTPEKQTPSGPTKPSEGPAKVE-EEAAPSIFDEPLERV 325

Query: 346 EREQLGSDQTNLFPKDSVPSESL-PITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFT 404
           +       + N+   D + +E L   T   + NT  VV +  L +   +D     +AI  
Sbjct: 326 KNNDPEMTEVNVNNSDCITNEILVRFTEALEFNT--VVKLFALANTRADDHVAFAIAIML 383

Query: 405 KGYLCLPYMALQQHHLLSDVTVRGFVA---------GATNILFRQQKHLSDAIVEVEEAL 455
           K    +  + L  +H    +T +G +A           T + F  Q+H+     E+E A 
Sbjct: 384 KANKTITSLNLDSNH----ITGKGILAIFRALLQNNTLTELRFHNQRHICGGKTEMEIAK 439

Query: 456 IQIHDPELRKL 466
           +   +  L KL
Sbjct: 440 LLKENTTLLKL 450


>gi|116292178 hypothetical protein LOC414918 [Homo sapiens]
          Length = 585

 Score = 37.4 bits (85), Expect = 0.043
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 37/149 (24%)

Query: 19  IVVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVF--- 75
           + VV F  + G  ++  YP       +D     +E   + +L+ PD       DT F   
Sbjct: 45  VCVVTFDLELGQALQLVYP-------NDFRLTDKEKSSICYLSFPDSHSGCLGDTQFSFR 97

Query: 76  ----------FHLPPRNGNG----------ATVFGISCYRQIEAKALKVRQADITRETVQ 115
                     +H   R+ N           A  FG   +RQ++  ++K       R   Q
Sbjct: 98  MRQCGGQRSPWHADDRHYNSRAPVALQREPAHYFGYVYFRQVKDSSVK-------RGYFQ 150

Query: 116 KSVCVLSKLPLYGLLQAKLQLITHAYFEE 144
           KS+ ++S+LP   L QA L LI   YF++
Sbjct: 151 KSLVLVSRLPFVRLFQALLSLIAPEYFDK 179


>gi|32698777 hypothetical protein LOC201627 [Homo sapiens]
          Length = 608

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 38/154 (24%)

Query: 17  LHIV-VVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVF 75
           LH V VVGF  + G  VE  YP         S     E   + +L+ PD       DT F
Sbjct: 62  LHCVCVVGFDLELGQAVEVIYP-------QHSKLTDREKTNICYLSFPDSNSGCLGDTQF 114

Query: 76  -FHLPPRNGNGATV----------------------FGISCYRQIEAKALKVRQADITRE 112
            F     +G   ++                      +G   +RQ+  K LK       R 
Sbjct: 115 CFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLK-------RG 167

Query: 113 TVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKD 146
             QKS+ ++SKLP        L+ I   YFE+ +
Sbjct: 168 YFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNE 201


>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
          Length = 1301

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 6/134 (4%)

Query: 234 SDCSQYRPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKT 293
           SD +        S+     +S+  +D   S+ ++D   +N        + N  + +    
Sbjct: 783 SDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSD-----SSNSSDSSDSSN 837

Query: 294 EEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSD 353
                   DSS G + + +N+     S  S DSS+S   + D S   D N        SD
Sbjct: 838 SSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSS-NSSDSSDSSDSNESSNSSDSSD 896

Query: 354 QTNLFPKDSVPSES 367
            +N    DS  S +
Sbjct: 897 SSNSSDSDSSDSSN 910


>gi|38788219 zinc finger protein 428 [Homo sapiens]
          Length = 188

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 301 EDSSKGQEPNDTNQYL--KPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLF 358
           ED S G E +  ++Y   +P S    D  E + ET D     DP  K +++LG  +    
Sbjct: 21  EDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY-DPGYKVKQRLGGGRGG-- 77

Query: 359 PKDSVPSESLPITVQPQANTGQV 381
                PS   P   QP A   Q+
Sbjct: 78  -----PSRRAPRAAQPPAQPCQL 95


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 230  EHGLSDCSQY--RPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRK---VMAGN 284
            ++ L +C Q   +P    S D    + N C  +  +A+ AD        +RK   V  G 
Sbjct: 1540 QNNLEECLQSCRKPGLMTSSDEDFFQKNACHSNVTTATKADHWSQGWAPLRKNSAVQPGQ 1599

Query: 285  HGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNL 344
               D+    EE     ++SSK       N     PS P      + W  L  S L+ P L
Sbjct: 1600 LSPDSHYPLEEEKTDCQESSKEAVRRHINVSFALPSGPELYLHSAPWNPLSSS-LQPPLL 1658

Query: 345  K 345
            +
Sbjct: 1659 E 1659


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 230  EHGLSDCSQY--RPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRK---VMAGN 284
            ++ L +C Q   +P    S D    + N C  +  +A+ AD        +RK   V  G 
Sbjct: 1540 QNNLEECLQSCRKPGLMTSSDEDFFQKNACHSNVTTATKADHWSQGWAPLRKNSAVQPGQ 1599

Query: 285  HGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNL 344
               D+    EE     ++SSK       N     PS P      + W  L  S L+ P L
Sbjct: 1600 LSPDSHYPLEEEKTDCQESSKEAVRRHINVSFALPSGPELYLHSAPWNPLSSS-LQPPLL 1658

Query: 345  K 345
            +
Sbjct: 1659 E 1659


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 230  EHGLSDCSQY--RPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRK---VMAGN 284
            ++ L +C Q   +P    S D    + N C  +  +A+ AD        +RK   V  G 
Sbjct: 1540 QNNLEECLQSCRKPGLMTSSDEDFFQKNACHSNVTTATKADHWSQGWAPLRKNSAVQPGQ 1599

Query: 285  HGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLEDPNL 344
               D+    EE     ++SSK       N     PS P      + W  L  S L+ P L
Sbjct: 1600 LSPDSHYPLEEEKTDCQESSKEAVRRHINVSFALPSGPELYLHSAPWNPLSSS-LQPPLL 1658

Query: 345  K 345
            +
Sbjct: 1659 E 1659


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 317 KPPSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPKDSVPSESLPITVQ 373
           +PP+   P +SE+    L  S      ++E+E++  D +   P++ VP   +PI  Q
Sbjct: 739 EPPAATQPQTSETQTSHLPESERIHHTVEEKEEVTMDTSENRPENDVPEPPMPIADQ 795


>gi|14150098 transmembrane protein 79 [Homo sapiens]
          Length = 394

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 319 PSRPSPDSSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPKDS----VPSESLPITVQP 374
           PS P PD     W  ++P   E   L + E+L  D  NL P+ +    VP +   I  QP
Sbjct: 84  PSAPFPDPP--GWRDIEPEPPESEPLTKLEELPEDDANLLPEKAARAFVPIDLQCIERQP 141

Query: 375 Q 375
           Q
Sbjct: 142 Q 142


>gi|156151443 alpha-kinase 1 [Homo sapiens]
          Length = 1244

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 286 GEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDP----SVLED 341
           G  ++   EE  + V+D S  +EP   +      S    +  E+D E        S L D
Sbjct: 588 GFSSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHD 647

Query: 342 PNLKEREQLGSDQTNLFPKDSVPSESLPITVQPQANTGQVVLIP--GLISGLEE 393
            +L+E      +  NL P  + P + +P+T     NT  + L P  GL+ G  E
Sbjct: 648 LSLQE-----PNNDNLEPSQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPE 696


>gi|156151441 alpha-kinase 1 [Homo sapiens]
          Length = 1244

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 286 GEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDP----SVLED 341
           G  ++   EE  + V+D S  +EP   +      S    +  E+D E        S L D
Sbjct: 588 GFSSSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHD 647

Query: 342 PNLKEREQLGSDQTNLFPKDSVPSESLPITVQPQANTGQVVLIP--GLISGLEE 393
            +L+E      +  NL P  + P + +P+T     NT  + L P  GL+ G  E
Sbjct: 648 LSLQE-----PNNDNLEPSQNQPQQQMPLTPFSPHNTPGIFLAPGAGLLEGAPE 696


>gi|239582765 ral guanine nucleotide dissociation stimulator-like 3
           isoform 1 [Homo sapiens]
          Length = 716

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 236 CSQYRPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKTEE 295
           C + R   S+       +SNP     +  S   VS   L T RK+      E+  + + E
Sbjct: 334 CRELRNFSSLRAILSALQSNPIYR--LKRSWGAVSREPLSTFRKLSQIFSDENNHLSSRE 391

Query: 296 PLFQVEDSSKGQEPNDTNQYL--KPPSRPSP 324
            LFQ E +   QE ++T   L  KPP  P P
Sbjct: 392 ILFQEEATEGSQEEDNTPGSLPSKPPPGPVP 422


>gi|239582763 ral guanine nucleotide dissociation stimulator-like 3
           isoform 2 [Homo sapiens]
          Length = 710

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 236 CSQYRPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIRKVMAGNHGEDAAMKTEE 295
           C + R   S+       +SNP     +  S   VS   L T RK+      E+  + + E
Sbjct: 334 CRELRNFSSLRAILSALQSNPIYR--LKRSWGAVSREPLSTFRKLSQIFSDENNHLSSRE 391

Query: 296 PLFQVEDSSKGQEPNDTNQYL--KPPSRPSP 324
            LFQ E +   QE ++T   L  KPP  P P
Sbjct: 392 ILFQEEATEGSQEEDNTPGSLPSKPPPGPVP 422


>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
          Length = 1711

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 16/189 (8%)

Query: 212  NKLVGALMTVLSLFPGMIEHGLSDCSQYRPRKSMSEDGGLQESNPCADDFVSASTADVSH 271
            +K  GA++ V        +  L   S+ R    + E+  LQ+      D    S    + 
Sbjct: 1527 SKFSGAVLNVPDTSDNSKKQMLRTRSKRRFVFKVPEEERLQQRREMLRDPELRSKMISNP 1586

Query: 272  TNLGTIRKVMAGNHGEDAAMKTEEPLFQVEDSSKGQE-PNDTNQYLKPPSRPSPDSSESD 330
            TN   +  +     G+   +  + PL  V  S + +  P  TN   +PPSR  P  S   
Sbjct: 1587 TNFNHVAHM---GPGDGMQVLMDLPLSAVPPSQEERPGPAPTNLARQPPSRNKPYISWPS 1643

Query: 331  WETLDPSV------LEDPNLKEREQLGSDQTNLFPKDSVPSESLPITVQPQANTGQVVLI 384
                +PSV      + DP+    ++  SD T    K S PS S   +  P  N+     +
Sbjct: 1644 SGGSEPSVTVPLRSMSDPDQDFDKEPDSDST----KHSTPSNSSNPSGPPSPNSPHRSQL 1699

Query: 385  PGLISGLEE 393
            P  + GLE+
Sbjct: 1700 P--LEGLEQ 1706


>gi|191250771 spire homolog 1 isoform b [Homo sapiens]
          Length = 742

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 303 SSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLE---DPNLKEREQLGSDQTNLFP 359
           S+  Q P    + L+ P+    DSSES+ ETL  S       P+  E   L +  T   P
Sbjct: 427 STSQQVPAQRKKLLRAPTLAELDSSESEEETLHKSTSSSSVSPSFPEEPVLEAVSTRKKP 486

Query: 360 KDSVPSESLP 369
              +P  S P
Sbjct: 487 PKFLPISSTP 496


>gi|191250775 spire homolog 1 isoform c [Homo sapiens]
          Length = 622

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 303 SSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLE---DPNLKEREQLGSDQTNLFP 359
           S+  Q P    + L+ P+    DSSES+ ETL  S       P+  E   L +  T   P
Sbjct: 307 STSQQVPAQRKKLLRAPTLAELDSSESEEETLHKSTSSSSVSPSFPEEPVLEAVSTRKKP 366

Query: 360 KDSVPSESLP 369
              +P  S P
Sbjct: 367 PKFLPISSTP 376


>gi|191250773 spire homolog 1 isoform a [Homo sapiens]
          Length = 756

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 303 SSKGQEPNDTNQYLKPPSRPSPDSSESDWETLDPSVLE---DPNLKEREQLGSDQTNLFP 359
           S+  Q P    + L+ P+    DSSES+ ETL  S       P+  E   L +  T   P
Sbjct: 441 STSQQVPAQRKKLLRAPTLAELDSSESEEETLHKSTSSSSVSPSFPEEPVLEAVSTRKKP 500

Query: 360 KDSVPSESLP 369
              +P  S P
Sbjct: 501 PKFLPISSTP 510


>gi|126723547 hypothetical protein LOC57523 [Homo sapiens]
          Length = 1898

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 14/75 (18%)

Query: 297 LFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSE--SDWETLDPSVLEDPNLKEREQLGSDQ 354
           LF V D   G++    +++LK P+R   D       W+TL PS      L +        
Sbjct: 925 LFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASVTELSD-------- 976

Query: 355 TNLFPKDSVPSESLP 369
                 DS P ESLP
Sbjct: 977 ----DADSGPLESLP 987


>gi|4885243 FOS-like antigen 1 [Homo sapiens]
          Length = 271

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 260 DFVSASTADVSHTNLGTIRKV---MAGNHGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYL 316
           DF+ A T  +     G  R++          +  ++   P+ ++ + +K  +   T+   
Sbjct: 131 DFLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIPEGAKEGDTGSTSGTS 190

Query: 317 KPPS--RPSPDSSESDWETLDPSVLEDPNL 344
            PP+  RP P  S S    L+P  L  P L
Sbjct: 191 SPPAPCRPVPCISLSPGPVLEPEALHTPTL 220


>gi|24797114 calcium-binding tyrosine phosphorylation-regulated
           protein isoform b [Homo sapiens]
          Length = 475

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 28/135 (20%)

Query: 289 AAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDS--------------------SE 328
           AA   E  +++VE  S+G  P    + LK P + S +S                      
Sbjct: 38  AAYFQELTMYRVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKSTDTDEDNVTRTEY 97

Query: 329 SDWETLDPSVLEDPNLKEREQLGS-DQTNLFPKDSVPSESLPIT-VQPQ-----ANTGQV 381
           SD  T  PSV   P  ++ E +G        PK + P  S P T V P+     A+  Q+
Sbjct: 98  SDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTAVSPEFAYVPADPAQL 157

Query: 382 VL-IPGLISGLEEDQ 395
              + G +S +  DQ
Sbjct: 158 AAQMLGKVSSIHSDQ 172



 Score = 29.6 bits (65), Expect = 9.1
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 303 SSKGQEPNDTNQYLKPPSRPSPD--SSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPK 360
           SSK   P  T     PPS P P   S E  +   DP+ L    L +   + SDQ+++   
Sbjct: 123 SSKPATPKTTT----PPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMV 178

Query: 361 DSVPSESLPITVQPQANTGQVVLI 384
           D   S  + I   P +   + V++
Sbjct: 179 DVATSMPVVIKEVPSSEAAEDVMV 202


>gi|151301098 zinc finger, DBF-type containing 2 [Homo sapiens]
          Length = 2354

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 6/81 (7%)

Query: 263 SASTADVSHTNLGTIRKVMAGNHGEDA-AMKTEEPLFQVEDSSKGQE-PNDTNQYLKP-P 319
           S+ST D +H N G+  +V+   H +DA + + EE   +VED    +E P++ ++ ++   
Sbjct: 62  SSSTQDETHVNTGSSSEVV---HLDDAFSEEEEEDEDKVEDEDATEERPSEVSEPIEELH 118

Query: 320 SRPSPDSSESDWETLDPSVLE 340
           SRP      +   ++ PSV++
Sbjct: 119 SRPHKSQEGTQEVSVRPSVIQ 139


>gi|24797108 calcium-binding tyrosine phosphorylation-regulated
           protein isoform a [Homo sapiens]
          Length = 493

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 6/84 (7%)

Query: 303 SSKGQEPNDTNQYLKPPSRPSPD--SSESDWETLDPSVLEDPNLKEREQLGSDQTNLFPK 360
           SSK   P  T     PPS P P   S E  +   DP+ L    L +   + SDQ+++   
Sbjct: 141 SSKPATPKTTT----PPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMV 196

Query: 361 DSVPSESLPITVQPQANTGQVVLI 384
           D   S  + I   P +   + V++
Sbjct: 197 DVATSMPVVIKEVPSSEAAEDVMV 220


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,849,277
Number of Sequences: 37866
Number of extensions: 1205318
Number of successful extensions: 3236
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3225
Number of HSP's gapped (non-prelim): 38
length of query: 648
length of database: 18,247,518
effective HSP length: 109
effective length of query: 539
effective length of database: 14,120,124
effective search space: 7610746836
effective search space used: 7610746836
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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