Guide to the Human Genome
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Search of human proteins with 5729804

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5729804 nudix-type motif 3 [Homo sapiens]
         (172 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5729804 nudix-type motif 3 [Homo sapiens]                          349   8e-97
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]           258   2e-69
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]            253   4e-68
gi|37221177 nudix-type motif 11 [Homo sapiens]                        249   1e-66
gi|41393549 nudix-type motif 10 [Homo sapiens]                        246   7e-66
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]                42   2e-04
gi|22219467 nudix-type motif 2 [Homo sapiens]                          41   4e-04
gi|22219465 nudix-type motif 2 [Homo sapiens]                          41   4e-04
gi|4502125 nudix-type motif 2 [Homo sapiens]                           41   4e-04
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]                39   0.002
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ...    37   0.006
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type...    37   0.011
gi|31542498 DCP2 decapping enzyme [Homo sapiens]                       33   0.12 
gi|37594464 nudix-type motif 5 [Homo sapiens]                          29   2.3  
gi|37537706 La ribonucleoprotein domain family, member 6 isoform...    28   3.0  
gi|37537710 La ribonucleoprotein domain family, member 6 isoform...    28   3.0  
gi|118572603 ubinuclein 1 [Homo sapiens]                               28   3.9  
gi|118572601 ubinuclein 1 [Homo sapiens]                               28   3.9  
gi|37594457 nudix-type motif 9 isoform b [Homo sapiens]                28   3.9  
gi|13129010 nudix-type motif 9 isoform a [Homo sapiens]                28   3.9  
gi|58331179 KIAA1688 protein [Homo sapiens]                            28   5.1  
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho...    27   6.7  
gi|49472835 bridging integrator 2 [Homo sapiens]                       27   8.7  
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]                  27   8.7  

>gi|5729804 nudix-type motif 3 [Homo sapiens]
          Length = 172

 Score =  349 bits (895), Expect = 8e-97
 Identities = 172/172 (100%), Positives = 172/172 (100%)

Query: 1   MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
           MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
Sbjct: 1   MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60

Query: 61  VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120
           VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF
Sbjct: 61  VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120

Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 172
           KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
Sbjct: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 172


>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
          Length = 180

 Score =  258 bits (659), Expect = 2e-69
 Identities = 125/156 (80%), Positives = 135/156 (86%)

Query: 1   MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
           MMK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PD+WIVPGGGMEPEEEP 
Sbjct: 1   MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 60

Query: 61  VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120
            AAVREV EEAGVKG LGRL+GIFENQ+RKHRTYVYVL VTE+LEDWEDSVNIGRKREWF
Sbjct: 61  GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 120

Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVV 156
           K+EDAIKVLQ HKPV A Y E L+ G S  NG   V
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTV 156


>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
          Length = 181

 Score =  253 bits (647), Expect = 4e-68
 Identities = 125/157 (79%), Positives = 135/157 (85%), Gaps = 1/157 (0%)

Query: 1   MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
           MMK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PD+WIVPGGGMEPEEEP 
Sbjct: 1   MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 60

Query: 61  VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW 119
            AAVREV EEAGVKG LGRL+GIFE NQ+RKHRTYVYVL VTE+LEDWEDSVNIGRKREW
Sbjct: 61  GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW 120

Query: 120 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVV 156
           FK+EDAIKVLQ HKPV A Y E L+ G S  NG   V
Sbjct: 121 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTV 157


>gi|37221177 nudix-type motif 11 [Homo sapiens]
          Length = 164

 Score =  249 bits (635), Expect = 1e-66
 Identities = 122/159 (76%), Positives = 136/159 (85%), Gaps = 1/159 (0%)

Query: 2   MKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSV 61
           MK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PDRWIVPGGGMEPEEEP  
Sbjct: 1   MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60

Query: 62  AAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120
           AAVREV EEAGVKG LGRL+G+FE NQ+RKHRTYVYVL VTE+LEDWEDSV+IGRKREWF
Sbjct: 61  AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120

Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATT 159
           K+EDAIKVLQ HKPV A Y E L+ G S  NG  +  ++
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159


>gi|41393549 nudix-type motif 10 [Homo sapiens]
          Length = 164

 Score =  246 bits (628), Expect = 7e-66
 Identities = 121/159 (76%), Positives = 135/159 (84%), Gaps = 1/159 (0%)

Query: 2   MKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSV 61
           MK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PDRWIVPGGGMEPEEEP  
Sbjct: 1   MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60

Query: 62  AAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120
           AAVREV EEAGVKG LGRL+G+FE NQ+ KHRTYVYVL VTE+LEDWEDSV+IGRKREWF
Sbjct: 61  AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120

Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATT 159
           K+EDAIKVLQ HKPV A Y E L+ G S  NG  +  ++
Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159


>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
          Length = 316

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 29  ESEEEVLLVSS-SRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ 87
           ES  ++L+V   ++  + W  PGG  EPEE+    AVREV EE G+K     ++ I +  
Sbjct: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212

Query: 88  ERKHRTYVYVLIVTEVLEDWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETL 143
                     + +   L+ +  ++N  ++     EW  + D  K  +   P+ +     L
Sbjct: 213 TNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLL 271

Query: 144 RQGY 147
             GY
Sbjct: 272 LYGY 275


>gi|22219467 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%)

Query: 33  EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F+ +     
Sbjct: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84

Query: 88  ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q+
Sbjct: 85  RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128


>gi|22219465 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%)

Query: 33  EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F+ +     
Sbjct: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84

Query: 88  ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q+
Sbjct: 85  RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128


>gi|4502125 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%)

Query: 33  EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F+ +     
Sbjct: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84

Query: 88  ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q+
Sbjct: 85  RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128


>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
          Length = 147

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 46  WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLE 105
           W  PGG  EPEE+    AVREV EE G+K     ++ I +            + +   L+
Sbjct: 2   WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLK 61

Query: 106 DWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETLRQGY 147
            +  ++N  ++     EW  + D  K  +   P+ +     L  GY
Sbjct: 62  PYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGY 106


>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
           motif 17 [Homo sapiens]
          Length = 328

 Score = 37.4 bits (85), Expect = 0.006
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 17/90 (18%)

Query: 30  SEEEVLLVSSSR----HPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL----V 81
           S++ VLL   +R     P+ W+ PGG +E EEE     +RE+ EE+G+    G+     +
Sbjct: 102 SDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161

Query: 82  GIFENQ---------ERKHRTYVYVLIVTE 102
           G++E+           + H   +Y+L++++
Sbjct: 162 GLWESAYPPRLSWGLPKYHHIVLYLLVISQ 191


>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
          motif 18 [Homo sapiens]
          Length = 323

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 26 FRSESEEEVLLVSSSRHPDR--WIVPGGGMEPEEEPSVAAVREVCEEAGV 73
          F SE ++EVLL+  ++   R  W +P G MEP E    A  REV EEAG+
Sbjct: 50 FLSE-QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL 98


>gi|31542498 DCP2 decapping enzyme [Homo sapiens]
          Length = 420

 Score = 33.1 bits (74), Expect = 0.12
 Identities = 19/44 (43%), Positives = 21/44 (47%)

Query: 29  ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAG 72
           E+ E VLLV        W  P G +  EE P   A REV EE G
Sbjct: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETG 150


>gi|37594464 nudix-type motif 5 [Homo sapiens]
          Length = 219

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 49  PGGGMEPEEEPSVAAVREVCEEAGVKGTL 77
           P G ++  E P  AA+RE+ EE G KG +
Sbjct: 95  PAGLIDDGETPEAAALRELEEETGYKGDI 123


>gi|37537706 La ribonucleoprotein domain family, member 6 isoform
          2 [Homo sapiens]
          Length = 93

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
          E EEE      +  P R++ PG G   EEEPS
Sbjct: 32 EDEEEGAETRGAGDPARYLSPGWGSASEEEPS 63


>gi|37537710 La ribonucleoprotein domain family, member 6 isoform
          1 [Homo sapiens]
          Length = 491

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
          E EEE      +  P R++ PG G   EEEPS
Sbjct: 32 EDEEEGAETRGAGDPARYLSPGWGSASEEEPS 63


>gi|118572603 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 16  GYKKRAACLCFR--SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV 73
           G+   +  L FR  SESE++ +     + P +  +  GG + +++       +  +    
Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDKEKKSKKS 218

Query: 74  KGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHK 133
           K +      +  ++E+K + Y   L V E+L+ ++      +KRE           + HK
Sbjct: 219 KFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EEHK 267

Query: 134 PV 135
           PV
Sbjct: 268 PV 269


>gi|118572601 ubinuclein 1 [Homo sapiens]
          Length = 1134

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 13/122 (10%)

Query: 16  GYKKRAACLCFR--SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV 73
           G+   +  L FR  SESE++ +     + P +  +  GG + +++       +  +    
Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDKEKKSKKS 218

Query: 74  KGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHK 133
           K +      +  ++E+K + Y   L V E+L+ ++      +KRE           + HK
Sbjct: 219 KFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EEHK 267

Query: 134 PV 135
           PV
Sbjct: 268 PV 269


>gi|37594457 nudix-type motif 9 isoform b [Homo sapiens]
          Length = 300

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 46  WIVPGGGMEPEEEPSVAAVREVCEEA 71
           W +PGG ++P E+ S    RE  EEA
Sbjct: 160 WAIPGGMVDPGEKISATLKREFGEEA 185


>gi|13129010 nudix-type motif 9 isoform a [Homo sapiens]
          Length = 350

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 46  WIVPGGGMEPEEEPSVAAVREVCEEA 71
           W +PGG ++P E+ S    RE  EEA
Sbjct: 210 WAIPGGMVDPGEKISATLKREFGEEA 235


>gi|58331179 KIAA1688 protein [Homo sapiens]
          Length = 1114

 Score = 27.7 bits (60), Expect = 5.1
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 10  RTYDGDGY--KKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVR 65
           R Y  DG     R + L + S ++E +L+  + R P      G G  P+  P V + R
Sbjct: 187 RDYSADGQLLHYRTSSLRWNSGAKERMLIKVADREPSFLAAQGNGYAPDGPPGVRSRR 244


>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
            sapiens]
          Length = 1781

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 38   SSSRHPDRWIVPGGGMEPEEEP 59
            SSS   DRW  P   +EPE++P
Sbjct: 1279 SSSHSDDRWFDPLDPLEPEQDP 1300


>gi|49472835 bridging integrator 2 [Homo sapiens]
          Length = 565

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)

Query: 27  RSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREV 67
           R++S+EEVL   SS  P     PGG + P  +PS +A   V
Sbjct: 354 RAKSQEEVL--PSSTTPS----PGGALSPSGQPSSSATEVV 388


>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
          Length = 1261

 Score = 26.9 bits (58), Expect = 8.7
 Identities = 16/67 (23%), Positives = 27/67 (40%)

Query: 5   KSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAV 64
           K  Q +  + +   K+A  LC + + E E    S  R  +  +   GG+       +   
Sbjct: 312 KQEQNKMLEAENALKKAKLLCMQRQDEYEKAKSSMFRAEEEHLSSSGGLAKNLNKQLEKK 371

Query: 65  REVCEEA 71
           R + EEA
Sbjct: 372 RRLEEEA 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,636,920
Number of Sequences: 37866
Number of extensions: 292107
Number of successful extensions: 710
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 684
Number of HSP's gapped (non-prelim): 25
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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