BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|5729804 nudix-type motif 3 [Homo sapiens] (172 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|5729804 nudix-type motif 3 [Homo sapiens] 349 8e-97 gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] 258 2e-69 gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] 253 4e-68 gi|37221177 nudix-type motif 11 [Homo sapiens] 249 1e-66 gi|41393549 nudix-type motif 10 [Homo sapiens] 246 7e-66 gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] 42 2e-04 gi|22219467 nudix-type motif 2 [Homo sapiens] 41 4e-04 gi|22219465 nudix-type motif 2 [Homo sapiens] 41 4e-04 gi|4502125 nudix-type motif 2 [Homo sapiens] 41 4e-04 gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] 39 0.002 gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 37 0.006 gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type... 37 0.011 gi|31542498 DCP2 decapping enzyme [Homo sapiens] 33 0.12 gi|37594464 nudix-type motif 5 [Homo sapiens] 29 2.3 gi|37537706 La ribonucleoprotein domain family, member 6 isoform... 28 3.0 gi|37537710 La ribonucleoprotein domain family, member 6 isoform... 28 3.0 gi|118572603 ubinuclein 1 [Homo sapiens] 28 3.9 gi|118572601 ubinuclein 1 [Homo sapiens] 28 3.9 gi|37594457 nudix-type motif 9 isoform b [Homo sapiens] 28 3.9 gi|13129010 nudix-type motif 9 isoform a [Homo sapiens] 28 3.9 gi|58331179 KIAA1688 protein [Homo sapiens] 28 5.1 gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 27 6.7 gi|49472835 bridging integrator 2 [Homo sapiens] 27 8.7 gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] 27 8.7 >gi|5729804 nudix-type motif 3 [Homo sapiens] Length = 172 Score = 349 bits (895), Expect = 8e-97 Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS Sbjct: 1 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 Query: 61 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF Sbjct: 61 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120 Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 172 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR Sbjct: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 172 >gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens] Length = 180 Score = 258 bits (659), Expect = 2e-69 Identities = 125/156 (80%), Positives = 135/156 (86%) Query: 1 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 MMK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PD+WIVPGGGMEPEEEP Sbjct: 1 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 60 Query: 61 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120 AAVREV EEAGVKG LGRL+GIFENQ+RKHRTYVYVL VTE+LEDWEDSVNIGRKREWF Sbjct: 61 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 120 Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVV 156 K+EDAIKVLQ HKPV A Y E L+ G S NG V Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTV 156 >gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens] Length = 181 Score = 253 bits (647), Expect = 4e-68 Identities = 125/157 (79%), Positives = 135/157 (85%), Gaps = 1/157 (0%) Query: 1 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 MMK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PD+WIVPGGGMEPEEEP Sbjct: 1 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 60 Query: 61 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW 119 AAVREV EEAGVKG LGRL+GIFE NQ+RKHRTYVYVL VTE+LEDWEDSVNIGRKREW Sbjct: 61 GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW 120 Query: 120 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVV 156 FK+EDAIKVLQ HKPV A Y E L+ G S NG V Sbjct: 121 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTV 157 >gi|37221177 nudix-type motif 11 [Homo sapiens] Length = 164 Score = 249 bits (635), Expect = 1e-66 Identities = 122/159 (76%), Positives = 136/159 (85%), Gaps = 1/159 (0%) Query: 2 MKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSV 61 MK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PDRWIVPGGGMEPEEEP Sbjct: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60 Query: 62 AAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120 AAVREV EEAGVKG LGRL+G+FE NQ+RKHRTYVYVL VTE+LEDWEDSV+IGRKREWF Sbjct: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120 Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATT 159 K+EDAIKVLQ HKPV A Y E L+ G S NG + ++ Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159 >gi|41393549 nudix-type motif 10 [Homo sapiens] Length = 164 Score = 246 bits (628), Expect = 7e-66 Identities = 121/159 (76%), Positives = 135/159 (84%), Gaps = 1/159 (0%) Query: 2 MKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSV 61 MK K NQTRTYD +G+KKRAACLCFRSE E+EVLLVSSSR+PDRWIVPGGGMEPEEEP Sbjct: 1 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG 60 Query: 62 AAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 120 AAVREV EEAGVKG LGRL+G+FE NQ+ KHRTYVYVL VTE+LEDWEDSV+IGRKREWF Sbjct: 61 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF 120 Query: 121 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATT 159 K+EDAIKVLQ HKPV A Y E L+ G S NG + ++ Sbjct: 121 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSS 159 >gi|20149583 nudix-type motif 6 isoform a [Homo sapiens] Length = 316 Score = 42.4 bits (98), Expect = 2e-04 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%) Query: 29 ESEEEVLLVSS-SRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ 87 ES ++L+V ++ + W PGG EPEE+ AVREV EE G+K ++ I + Sbjct: 153 ESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH 212 Query: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETL 143 + + L+ + ++N ++ EW + D K + P+ + L Sbjct: 213 TNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLL 271 Query: 144 RQGY 147 GY Sbjct: 272 LYGY 275 >gi|22219467 nudix-type motif 2 [Homo sapiens] Length = 147 Score = 41.2 bits (95), Expect = 4e-04 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%) Query: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87 E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F+ + Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84 Query: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131 K +T +Y L ++D++ + + + + W +E+A ++ Q+ Sbjct: 85 RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128 >gi|22219465 nudix-type motif 2 [Homo sapiens] Length = 147 Score = 41.2 bits (95), Expect = 4e-04 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%) Query: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87 E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F+ + Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84 Query: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131 K +T +Y L ++D++ + + + + W +E+A ++ Q+ Sbjct: 85 RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128 >gi|4502125 nudix-type motif 2 [Homo sapiens] Length = 147 Score = 41.2 bits (95), Expect = 4e-04 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%) Query: 33 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87 E LL+ +S W P G +EP E+ A+RE EEAG++ ++ F+ + Sbjct: 25 EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84 Query: 88 ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131 K +T +Y L ++D++ + + + + W +E+A ++ Q+ Sbjct: 85 RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128 >gi|37594461 nudix-type motif 6 isoform b [Homo sapiens] Length = 147 Score = 39.3 bits (90), Expect = 0.002 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 5/106 (4%) Query: 46 WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLE 105 W PGG EPEE+ AVREV EE G+K ++ I + + + L+ Sbjct: 2 WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLK 61 Query: 106 DWEDSVNIGRKR----EWFKIEDAIKVLQYHKPVQASYFETLRQGY 147 + ++N ++ EW + D K + P+ + L GY Sbjct: 62 PYSFTINFCQEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGY 106 >gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Homo sapiens] Length = 328 Score = 37.4 bits (85), Expect = 0.006 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 17/90 (18%) Query: 30 SEEEVLLVSSSR----HPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL----V 81 S++ VLL +R P+ W+ PGG +E EEE +RE+ EE+G+ G+ + Sbjct: 102 SDKTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161 Query: 82 GIFENQ---------ERKHRTYVYVLIVTE 102 G++E+ + H +Y+L++++ Sbjct: 162 GLWESAYPPRLSWGLPKYHHIVLYLLVISQ 191 >gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Homo sapiens] Length = 323 Score = 36.6 bits (83), Expect = 0.011 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 26 FRSESEEEVLLVSSSRHPDR--WIVPGGGMEPEEEPSVAAVREVCEEAGV 73 F SE ++EVLL+ ++ R W +P G MEP E A REV EEAG+ Sbjct: 50 FLSE-QDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL 98 >gi|31542498 DCP2 decapping enzyme [Homo sapiens] Length = 420 Score = 33.1 bits (74), Expect = 0.12 Identities = 19/44 (43%), Positives = 21/44 (47%) Query: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAG 72 E+ E VLLV W P G + EE P A REV EE G Sbjct: 107 ETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETG 150 >gi|37594464 nudix-type motif 5 [Homo sapiens] Length = 219 Score = 28.9 bits (63), Expect = 2.3 Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 49 PGGGMEPEEEPSVAAVREVCEEAGVKGTL 77 P G ++ E P AA+RE+ EE G KG + Sbjct: 95 PAGLIDDGETPEAAALRELEEETGYKGDI 123 >gi|37537706 La ribonucleoprotein domain family, member 6 isoform 2 [Homo sapiens] Length = 93 Score = 28.5 bits (62), Expect = 3.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Query: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 E EEE + P R++ PG G EEEPS Sbjct: 32 EDEEEGAETRGAGDPARYLSPGWGSASEEEPS 63 >gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1 [Homo sapiens] Length = 491 Score = 28.5 bits (62), Expect = 3.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Query: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60 E EEE + P R++ PG G EEEPS Sbjct: 32 EDEEEGAETRGAGDPARYLSPGWGSASEEEPS 63 >gi|118572603 ubinuclein 1 [Homo sapiens] Length = 1134 Score = 28.1 bits (61), Expect = 3.9 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 13/122 (10%) Query: 16 GYKKRAACLCFR--SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV 73 G+ + L FR SESE++ + + P + + GG + +++ + + Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDKEKKSKKS 218 Query: 74 KGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHK 133 K + + ++E+K + Y L V E+L+ ++ +KRE + HK Sbjct: 219 KFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EEHK 267 Query: 134 PV 135 PV Sbjct: 268 PV 269 >gi|118572601 ubinuclein 1 [Homo sapiens] Length = 1134 Score = 28.1 bits (61), Expect = 3.9 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 13/122 (10%) Query: 16 GYKKRAACLCFR--SESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV 73 G+ + L FR SESE++ + + P + + GG + +++ + + Sbjct: 159 GFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYDKEKKSKKS 218 Query: 74 KGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHK 133 K + + ++E+K + Y L V E+L+ ++ +KRE + HK Sbjct: 219 KFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKRE-----------EEHK 267 Query: 134 PV 135 PV Sbjct: 268 PV 269 >gi|37594457 nudix-type motif 9 isoform b [Homo sapiens] Length = 300 Score = 28.1 bits (61), Expect = 3.9 Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 46 WIVPGGGMEPEEEPSVAAVREVCEEA 71 W +PGG ++P E+ S RE EEA Sbjct: 160 WAIPGGMVDPGEKISATLKREFGEEA 185 >gi|13129010 nudix-type motif 9 isoform a [Homo sapiens] Length = 350 Score = 28.1 bits (61), Expect = 3.9 Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 46 WIVPGGGMEPEEEPSVAAVREVCEEA 71 W +PGG ++P E+ S RE EEA Sbjct: 210 WAIPGGMVDPGEKISATLKREFGEEA 235 >gi|58331179 KIAA1688 protein [Homo sapiens] Length = 1114 Score = 27.7 bits (60), Expect = 5.1 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 10 RTYDGDGY--KKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVR 65 R Y DG R + L + S ++E +L+ + R P G G P+ P V + R Sbjct: 187 RDYSADGQLLHYRTSSLRWNSGAKERMLIKVADREPSFLAAQGNGYAPDGPPGVRSRR 244 >gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo sapiens] Length = 1781 Score = 27.3 bits (59), Expect = 6.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 38 SSSRHPDRWIVPGGGMEPEEEP 59 SSS DRW P +EPE++P Sbjct: 1279 SSSHSDDRWFDPLDPLEPEQDP 1300 >gi|49472835 bridging integrator 2 [Homo sapiens] Length = 565 Score = 26.9 bits (58), Expect = 8.7 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Query: 27 RSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREV 67 R++S+EEVL SS P PGG + P +PS +A V Sbjct: 354 RAKSQEEVL--PSSTTPS----PGGALSPSGQPSSSATEVV 388 >gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] Length = 1261 Score = 26.9 bits (58), Expect = 8.7 Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 5 KSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAV 64 K Q + + + K+A LC + + E E S R + + GG+ + Sbjct: 312 KQEQNKMLEAENALKKAKLLCMQRQDEYEKAKSSMFRAEEEHLSSSGGLAKNLNKQLEKK 371 Query: 65 REVCEEA 71 R + EEA Sbjct: 372 RRLEEEA 378 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.131 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,636,920 Number of Sequences: 37866 Number of extensions: 292107 Number of successful extensions: 710 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 684 Number of HSP's gapped (non-prelim): 25 length of query: 172 length of database: 18,247,518 effective HSP length: 95 effective length of query: 77 effective length of database: 14,650,248 effective search space: 1128069096 effective search space used: 1128069096 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.