Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ESPL1 Sequence: fasta or formatted (2120aa) NCBI GI: 134276943
Description:

separase

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9        209           3
 C cysteine            2.9         62           2
 D aspartate           4.1         87           2
 E glutamate           6.4        135           3
 F phenylalanine       2.6         56           2
 G glycine             6.0        128           2
 H histidine           2.3         48           2
 I isoleucine          2.5         54           2
 K lysine              4.6         98           3
 L leucine            16.1        341           4
 M methionine          0.9         20           1
 N asparagine          2.0         43           2
 P proline             6.1        129           2
 Q glutamine           6.3        133           3
 R arginine            6.0        127           2
 S serine              8.1        172           3
 T threonine           4.2         89           2
 V valine              5.4        115           3
 W tryptophan          1.4         30           2
 Y tyrosine            2.1         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   separase 
REXO1                 0.004   transcription elongation factor B polypeptide 3 bin...
ZNF469                0.004   zinc finger protein 469 
BAT2                  0.004   HLA-B associated transcript-2 
PRPF4B                0.004   serine/threonine-protein kinase PRP4K 
LOC100290946          0.003   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.003   PREDICTED: hypothetical protein XP_002344246 
BSN                   0.003   bassoon protein 
SAMD11                0.003   sterile alpha motif domain containing 11 
MLL4                  0.003   myeloid/lymphoid or mixed-lineage leukemia 4 
FLJ37078              0.003   hypothetical protein LOC222183 
PHRF1                 0.003   PHD and ring finger domains 1 
SRRM2                 0.003   splicing coactivator subunit SRm300 
SRRM1                 0.003   serine/arginine repetitive matrix 1 
LOC100292122          0.003   PREDICTED: hypothetical protein XP_002345138 
LOC100286986          0.003   PREDICTED: hypothetical protein XP_002344191 
BAT3                  0.002   HLA-B associated transcript-3 isoform b 
BAT3                  0.002   HLA-B associated transcript-3 isoform b 
BAT3                  0.002   HLA-B associated transcript-3 isoform b 
BAT3                  0.002   HLA-B associated transcript-3 isoform a 
ADCY5                 0.002   adenylate cyclase 5 
FBRSL1                0.002   fibrosin-like 1 
KIAA1370              0.002   hypothetical protein LOC56204 
PLEKHA6               0.002   phosphoinositol 3-phosphate-binding protein-3 
AKAP9                 0.002   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.002   A-kinase anchor protein 9 isoform 3 
EVC2                  0.002   limbin 
KIF26A                0.002   kinesin family member 26A 
SYDE1                 0.002   synapse defective 1, Rho GTPase, homolog 1 
COL1A1                0.002   alpha 1 type I collagen preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press