Guide to the Human Genome
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Name: OR10C1 Sequence: fasta or formatted (312aa) NCBI GI: 53793673
Description:

olfactory receptor, family 10, subfamily C, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         26           2
 C cysteine            3.5         11           2
 D aspartate           1.9          6           1
 E glutamate           2.6          8           1
 F phenylalanine       7.4         23           3
 G glycine             5.8         18           1
 H histidine           2.2          7           2
 I isoleucine          7.4         23           2
 K lysine              1.6          5           1
 L leucine            17.0         53           3
 M methionine          1.9          6           1
 N asparagine          1.9          6           1
 P proline             5.4         17           1
 Q glutamine           2.9          9           1
 R arginine            4.5         14           2
 S serine              7.4         23           2
 T threonine           7.1         22           1
 V valine              7.1         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 10, subfamily C, member 1... 
OR10A4                0.545   olfactory receptor, family 10, subfamily A, member 4...
OR10A7                0.522   olfactory receptor, family 10, subfamily A, member 7...
OR10A5                0.490   olfactory receptor, family 10, subfamily A, member 5...
OR5V1                 0.485   olfactory receptor, family 5, subfamily V, member 1 ...
OR10A3                0.481   olfactory receptor, family 10, subfamily A, member 3...
OR10A2                0.473   olfactory receptor, family 10, subfamily A, member 2...
OR10P1                0.471   olfactory receptor, family 10, subfamily P, member 1...
OR11L1                0.463   olfactory receptor, family 11, subfamily L, member 1...
OR10K1                0.463   olfactory receptor, family 10, subfamily K, member 1...
OR10AG1               0.460   olfactory receptor, family 10, subfamily AG, member ...
OR2A1                 0.456   olfactory receptor, family 2, subfamily A, member 1 ...
OR2D2                 0.455   olfactory receptor, family 2, subfamily D, member 2 ...
OR10R2                0.455   olfactory receptor, family 10, subfamily R, member 2...
OR6N1                 0.455   olfactory receptor, family 6, subfamily N, member 1 ...
OR10A6                0.453   olfactory receptor, family 10, subfamily A, member 6...
OR2A42                0.449   olfactory receptor, family 2, subfamily A, member 42...
OR5AS1                0.444   olfactory receptor, family 5, subfamily AS, member 1...
OR2A12                0.443   olfactory receptor, family 2, subfamily A, member 12...
OR2A5                 0.443   olfactory receptor, family 2, subfamily A, member 5 ...
OR2D3                 0.443   olfactory receptor, family 2, subfamily D, member 3 ...
OR2C3                 0.441   olfactory receptor, family 2, subfamily C, member 3...
OR6N2                 0.439   olfactory receptor, family 6, subfamily N, member 2 ...
OR10K2                0.439   olfactory receptor, family 10, subfamily K, member 2...
OR2T10                0.438   olfactory receptor, family 2, subfamily T, member 10...
OR5AP2                0.436   olfactory receptor, family 5, subfamily AP, member 2...
OR6B1                 0.434   olfactory receptor, family 6, subfamily B, member 1 ...
OR1M1                 0.434   olfactory receptor, family 1, subfamily M, member 1 ...
OR10J1                0.431   olfactory receptor, family 10, subfamily J, member 1 ...
OR6Y1                 0.431   olfactory receptor, family 6, subfamily Y, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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