Guide to the Human Genome
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Name: OR10V1 Sequence: fasta or formatted (309aa) NCBI GI: 52693927
Description:

olfactory receptor, family 10, subfamily V, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           1
 C cysteine            2.9          9           1
 D aspartate           2.3          7           1
 E glutamate           2.6          8           1
 F phenylalanine       7.4         23           3
 G glycine             4.2         13           2
 H histidine           2.6          8           1
 I isoleucine          9.1         28           2
 K lysine              2.6          8           1
 L leucine            14.2         44           2
 M methionine          4.2         13           2
 N asparagine          2.6          8           1
 P proline             4.9         15           1
 Q glutamine           2.6          8           2
 R arginine            3.9         12           1
 S serine              9.1         28           3
 T threonine           5.2         16           1
 V valine              8.1         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 10, subfamily V, member 1... 
OR10Q1                0.547   olfactory receptor, family 10, subfamily Q, member 1...
OR10W1                0.465   olfactory receptor, family 10, subfamily W, member 1...
OR10R2                0.463   olfactory receptor, family 10, subfamily R, member 2...
OR10K2                0.448   olfactory receptor, family 10, subfamily K, member 2...
OR10K1                0.445   olfactory receptor, family 10, subfamily K, member 1...
OR10J1                0.443   olfactory receptor, family 10, subfamily J, member 1 ...
OR10Z1                0.441   olfactory receptor, family 10, subfamily Z, member 1...
OR2A1                 0.438   olfactory receptor, family 2, subfamily A, member 1 ...
OR10T2                0.433   olfactory receptor, family 10, subfamily T, member 2...
OR10A3                0.433   olfactory receptor, family 10, subfamily A, member 3...
OR2K2                 0.433   olfactory receptor, family 2, subfamily K, member 2 ...
OR10A6                0.433   olfactory receptor, family 10, subfamily A, member 6...
OR10J5                0.431   olfactory receptor, family 10, subfamily J, member 5...
OR2B2                 0.431   olfactory receptor, family 2, subfamily B, member 2 ...
OR2A42                0.431   olfactory receptor, family 2, subfamily A, member 42...
OR2G3                 0.431   olfactory receptor, family 2, subfamily G, member 3 ...
OR9G4                 0.431   olfactory receptor, family 9, subfamily G, member 4 ...
OR5V1                 0.428   olfactory receptor, family 5, subfamily V, member 1 ...
OR10A7                0.426   olfactory receptor, family 10, subfamily A, member 7...
OR2T10                0.422   olfactory receptor, family 2, subfamily T, member 10...
OR2C3                 0.419   olfactory receptor, family 2, subfamily C, member 3...
OR11L1                0.416   olfactory receptor, family 11, subfamily L, member 1...
OR2B6                 0.416   olfactory receptor, family 2, subfamily B, member 6 ...
OR2A12                0.414   olfactory receptor, family 2, subfamily A, member 12...
OR5A2                 0.414   olfactory receptor, family 5, subfamily A, member 2 ...
OR8H1                 0.412   olfactory receptor, family 8, subfamily H, member 1 ...
OR13F1                0.412   olfactory receptor, family 13, subfamily F, member 1...
OR13D1                0.411   olfactory receptor, family 13, subfamily D, member 1...
OR2C1                 0.411   olfactory receptor, family 2, subfamily C, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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