Guide to the Human Genome
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Name: OR13C2 Sequence: fasta or formatted (318aa) NCBI GI: 52317180
Description:

olfactory receptor, family 13, subfamily C, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         17           2
 C cysteine            2.5          8           1
 D aspartate           3.5         11           2
 E glutamate           3.5         11           1
 F phenylalanine       6.9         22           2
 G glycine             4.4         14           1
 H histidine           2.2          7           1
 I isoleucine         10.4         33           2
 K lysine              4.4         14           1
 L leucine            13.2         42           3
 M methionine          5.3         17           2
 N asparagine          4.1         13           2
 P proline             3.8         12           1
 Q glutamine           0.9          3           1
 R arginine            2.8          9           2
 S serine              8.8         28           3
 T threonine           6.6         21           3
 V valine              7.2         23           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 13, subfamily C, member 2... 
OR13C5                0.927   olfactory receptor, family 13, subfamily C, member 5...
OR13C9                0.917   olfactory receptor, family 13, subfamily C, member 9...
OR13C3                0.679   olfactory receptor, family 13, subfamily C, member 3...
OR13C4                0.664   olfactory receptor, family 13, subfamily C, member 4...
OR13C8                0.645   olfactory receptor, family 13, subfamily C, member 8...
OR2S2                 0.630   olfactory receptor, family 2, subfamily S, member 2...
OR13D1                0.593   olfactory receptor, family 13, subfamily D, member 1...
OR2K2                 0.548   olfactory receptor, family 2, subfamily K, member 2 ...
OR13F1                0.522   olfactory receptor, family 13, subfamily F, member 1...
OR13J1                0.490   olfactory receptor, family 13, subfamily J, member 1...
OR2G3                 0.487   olfactory receptor, family 2, subfamily G, member 3 ...
OR2B3                 0.467   olfactory receptor, family 2, subfamily B, member 3 ...
OR5V1                 0.465   olfactory receptor, family 5, subfamily V, member 1 ...
OR2B6                 0.465   olfactory receptor, family 2, subfamily B, member 6 ...
OR2B2                 0.463   olfactory receptor, family 2, subfamily B, member 2 ...
OR2G6                 0.458   olfactory receptor, family 2, subfamily G, member 6 ...
OR5F1                 0.447   olfactory receptor, family 5, subfamily F, member 1 ...
OR2F1                 0.447   olfactory receptor, family 2, subfamily F, member 1 ...
OR2C3                 0.444   olfactory receptor, family 2, subfamily C, member 3...
OR2B11                0.442   olfactory receptor, family 2, subfamily B, member 11...
OR10A7                0.440   olfactory receptor, family 10, subfamily A, member 7...
OR2J3                 0.437   olfactory receptor, family 2, subfamily J, member 3...
OR2J2                 0.437   olfactory receptor, family 2, subfamily J, member 2...
OR2D3                 0.437   olfactory receptor, family 2, subfamily D, member 3 ...
OR2H2                 0.435   olfactory receptor, family 2, subfamily H, member 2 ...
OR13H1                0.435   olfactory receptor, family 13, subfamily H, member 1...
OR5A2                 0.432   olfactory receptor, family 5, subfamily A, member 2 ...
OR2W1                 0.432   olfactory receptor, family 2, subfamily W, member 1 ...
OR2C1                 0.432   olfactory receptor, family 2, subfamily C, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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