Guide to the Human Genome
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Name: OR13C9 Sequence: fasta or formatted (318aa) NCBI GI: 50080197
Description:

olfactory receptor, family 13, subfamily C, member 9

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         16           1
 C cysteine            2.5          8           1
 D aspartate           2.8          9           2
 E glutamate           3.5         11           1
 F phenylalanine       7.5         24           2
 G glycine             4.4         14           1
 H histidine           2.5          8           1
 I isoleucine          9.4         30           2
 K lysine              4.7         15           1
 L leucine            12.9         41           3
 M methionine          5.7         18           2
 N asparagine          4.1         13           1
 P proline             4.1         13           1
 Q glutamine           1.3          4           1
 R arginine            2.8          9           2
 S serine              8.8         28           2
 T threonine           6.3         20           3
 V valine              7.5         24           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 13, subfamily C, member 9... 
OR13C2                0.911   olfactory receptor, family 13, subfamily C, member 2...
OR13C5                0.855   olfactory receptor, family 13, subfamily C, member 5...
OR13C3                0.668   olfactory receptor, family 13, subfamily C, member 3...
OR13C4                0.658   olfactory receptor, family 13, subfamily C, member 4...
OR13C8                0.640   olfactory receptor, family 13, subfamily C, member 8...
OR2S2                 0.620   olfactory receptor, family 2, subfamily S, member 2...
OR13D1                0.578   olfactory receptor, family 13, subfamily D, member 1...
OR2K2                 0.550   olfactory receptor, family 2, subfamily K, member 2 ...
OR13F1                0.515   olfactory receptor, family 13, subfamily F, member 1...
OR2G3                 0.492   olfactory receptor, family 2, subfamily G, member 3 ...
OR13J1                0.483   olfactory receptor, family 13, subfamily J, member 1...
OR5V1                 0.475   olfactory receptor, family 5, subfamily V, member 1 ...
OR2B2                 0.472   olfactory receptor, family 2, subfamily B, member 2 ...
OR2B6                 0.472   olfactory receptor, family 2, subfamily B, member 6 ...
OR2B3                 0.467   olfactory receptor, family 2, subfamily B, member 3 ...
OR2G6                 0.465   olfactory receptor, family 2, subfamily G, member 6 ...
OR2C3                 0.455   olfactory receptor, family 2, subfamily C, member 3...
OR2F1                 0.454   olfactory receptor, family 2, subfamily F, member 1 ...
OR2D3                 0.446   olfactory receptor, family 2, subfamily D, member 3 ...
OR5F1                 0.446   olfactory receptor, family 5, subfamily F, member 1 ...
OR2J3                 0.442   olfactory receptor, family 2, subfamily J, member 3...
OR2H2                 0.441   olfactory receptor, family 2, subfamily H, member 2 ...
OR5I1                 0.441   olfactory receptor, family 5, subfamily I, member 1 [...
OR2C1                 0.439   olfactory receptor, family 2, subfamily C, member 1...
OR10A7                0.439   olfactory receptor, family 10, subfamily A, member 7...
OR5A2                 0.439   olfactory receptor, family 5, subfamily A, member 2 ...
OR13H1                0.437   olfactory receptor, family 13, subfamily H, member 1...
OR2B11                0.436   olfactory receptor, family 2, subfamily B, member 11...
OR2D2                 0.436   olfactory receptor, family 2, subfamily D, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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