Guide to the Human Genome
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Name: L2HGDH Sequence: fasta or formatted (463aa) NCBI GI: 13376331
Description:

L-2-hydroxyglutarate dehydrogenase precursor

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         37           2
 C cysteine            2.8         13           1
 D aspartate           4.8         22           1
 E glutamate           5.2         24           2
 F phenylalanine       4.1         19           1
 G glycine            10.6         49           3
 H histidine           1.5          7           1
 I isoleucine          7.8         36           3
 K lysine              5.2         24           3
 L leucine             8.9         41           3
 M methionine          1.7          8           1
 N asparagine          2.4         11           1
 P proline             5.6         26           1
 Q glutamine           4.3         20           2
 R arginine            5.8         27           1
 S serine              7.1         33           2
 T threonine           2.8         13           1
 V valine              7.1         33           2
 W tryptophan          0.2          1           1
 Y tyrosine            4.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   L-2-hydroxyglutarate dehydrogenase precursor 
PDPR                  0.024   pyruvate dehydrogenase phosphatase regulatory subun...
SARDH                 0.024   sarcosine dehydrogenase precursor 
SARDH                 0.024   sarcosine dehydrogenase precursor 
FOXRED1               0.012   FAD-dependent oxidoreductase domain containing 1 [Hom...
GPD2                  0.011   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.011   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
DMGDH                 0.008   dimethylglycine dehydrogenase precursor 
MAOA                  0.007   monoamine oxidase A 
SEPT14                0.007   septin 14 
MAOB                  0.007   monoamine oxidase B 
RETSAT                0.006   all-trans-13,14-dihydroretinol saturase 
KRT24                 0.006   keratin 24 
GSR                   0.006   glutathione reductase 
C17orf103             0.006   transcript expressed during hematopoiesis 2 
ANKRD36               0.006   PREDICTED: ankyrin repeat domain 36 
COQ6                  0.004   coenzyme Q6 homolog isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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