Guide to the Human Genome
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Name: FAM90A9 Sequence: fasta or formatted (464aa) NCBI GI: 51466913
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         48           3
 C cysteine            2.2         10           1
 D aspartate           3.4         16           1
 E glutamate           5.6         26           2
 F phenylalanine       1.7          8           1
 G glycine             6.9         32           2
 H histidine           3.0         14           2
 I isoleucine          0.6          3           1
 K lysine              6.5         30           2
 L leucine             8.4         39           2
 M methionine          1.9          9           2
 N asparagine          1.9          9           1
 P proline            13.6         63           3
 Q glutamine           5.6         26           2
 R arginine            7.8         36           2
 S serine             10.6         49           5
 T threonine           4.1         19           2
 V valine              4.7         22           2
 W tryptophan          0.9          4           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FAM90A19              0.989   PREDICTED: hypothetical protein 
FAM90A18              0.989   PREDICTED: hypothetical protein LOC441326 
FAM90A8               0.988   PREDICTED: hypothetical protein 
FAM90A15              0.982   PREDICTED: hypothetical protein LOC389630 
FAM90A14              0.978   PREDICTED: hypothetical protein 
FAM90A13              0.978   PREDICTED: hypothetical protein 
FAM90A3               0.977   PREDICTED: hypothetical protein 
FAM90A5               0.976   PREDICTED: hypothetical protein 
FAM90A10              0.975   PREDICTED: hypothetical protein LOC441328 
FAM90A12              0.974   PREDICTED: hypothetical protein 
FAM90A7               0.974   hypothetical protein LOC441317 
FAM90A20              0.942   PREDICTED: hypothetical protein 
FAM90A20              0.938   PREDICTED: hypothetical protein 
LOC100287045          0.932   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.932   PREDICTED: hypothetical protein XP_002342468 isofor...
FAM90A1               0.915   hypothetical protein LOC55138 
LOC646508             0.217   PREDICTED: hypothetical LOC646508 
LOC646508             0.217   PREDICTED: hypothetical LOC646508 
LOC646508             0.163   PREDICTED: hypothetical LOC646508 
FLJ22184              0.029   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
PCLO                  0.025   piccolo isoform 2 
PCLO                  0.025   piccolo isoform 1 
FSCB                  0.024   fibrous sheath CABYR binding protein 
ATN1                  0.023   atrophin-1 
ATN1                  0.023   atrophin-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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