LOC646066 31874

Name: LOC646066	Sequence: fasta or formatted (198aa)		NCBI GI: 51464850
Description: PREDICTED: similar to TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 22 2 C cysteine 1.5 3 1 D aspartate 4.5 9 1 E glutamate 11.1 22 2 F phenylalanine 2.0 4 1 G glycine 7.6 15 1 H histidine 1.0 2 1 I isoleucine 2.5 5 1 K lysine 7.1 14 2 L leucine 8.1 16 2 M methionine 5.1 10 1 N asparagine 2.0 4 1 P proline 6.1 12 2 Q glutamine 2.5 5 1 R arginine 8.6 17 2 S serine 7.6 15 2 T threonine 5.1 10 2 V valine 5.6 11 2 W tryptophan 0.5 1 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391763 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 1.000 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC729711 0.997 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.997 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646103 0.992 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391766 0.953 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.953 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.951 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC285697 0.882 PREDICTED: similar to hCG1807616 LOC285697 0.882 PREDICTED: similar to hCG1807616 LOC285697 0.882 PREDICTED: hypothetical protein LOC285697 LOC642127 0.863 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.863 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.863 PREDICTED: hypothetical protein XP_002342536 LOC391764 0.855 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.855 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.855 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.773 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.773 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.773 PREDICTED: similar to TBP-associated factor 11 [Homo... TAF11 0.523 TBP-associated factor 11 EPS8L1 0.033 epidermal growth factor receptor pathway substrate ... EPS8L1 0.022 epidermal growth factor receptor pathway substrate ... MAP7 0.022 microtubule-associated protein 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.