LOC391764 19636

Name: LOC391764	Sequence: fasta or formatted (198aa)		NCBI GI: 239748525
Description: PREDICTED: similar to TBP-associated factor 11		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [198aa] PREDICTED: similar to TBP-associated factor 11 alt mRNA [198aa] PREDICTED: similar to TBP-associated factor 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 18 2 C cysteine 1.0 2 1 D aspartate 5.6 11 1 E glutamate 11.1 22 2 F phenylalanine 2.5 5 1 G glycine 5.6 11 1 H histidine 0.5 1 1 I isoleucine 3.0 6 1 K lysine 7.6 15 2 L leucine 7.1 14 2 M methionine 5.6 11 1 N asparagine 3.0 6 1 P proline 6.6 13 2 Q glutamine 4.0 8 1 R arginine 8.1 16 2 S serine 7.6 15 1 T threonine 5.6 11 2 V valine 4.5 9 2 W tryptophan 0.5 1 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 1.000 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391764 0.997 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.916 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC642127 0.916 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC100288018 0.916 PREDICTED: hypothetical protein XP_002342536 LOC285697 0.883 PREDICTED: similar to hCG1807616 LOC285697 0.883 PREDICTED: similar to hCG1807616 LOC285697 0.883 PREDICTED: hypothetical protein LOC285697 LOC391766 0.861 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.861 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391763 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC646103 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC402207 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729706 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729724 0.848 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391747 0.848 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646066 0.848 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391766 0.845 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC729711 0.845 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391746 0.845 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC646103 0.837 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.783 PREDICTED: similar to TBP-associated factor 11 [Hom... LOC391767 0.783 PREDICTED: similar to TBP-associated factor 11 [Homo... LOC391767 0.783 PREDICTED: similar to TBP-associated factor 11 [Homo... TAF11 0.530 TBP-associated factor 11 EPS8L1 0.024 epidermal growth factor receptor pathway substrate ... EPS8L1 0.022 epidermal growth factor receptor pathway substrate ... SIPA1L2 0.019 signal-induced proliferation-associated 1 like 2 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.