Guide to the Human Genome
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Name: POTEA Sequence: fasta or formatted (452aa) NCBI GI: 50897294
Description:

POTE ankyrin domain family, member A isoform 1

Referenced in:

Prostate

Other entries for this name:
alt prot [498aa] POTE ankyrin domain family, member A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         27           3
 C cysteine            2.7         12           4
 D aspartate           6.4         29           2
 E glutamate           8.6         39           3
 F phenylalanine       2.4         11           1
 G glycine             6.0         27           2
 H histidine           3.5         16           1
 I isoleucine          3.1         14           1
 K lysine              8.8         40           3
 L leucine            10.6         48           3
 M methionine          3.1         14           1
 N asparagine          6.9         31           2
 P proline             4.0         18           1
 Q glutamine           5.1         23           2
 R arginine            4.6         21           2
 S serine              6.4         29           2
 T threonine           3.3         15           1
 V valine              5.1         23           2
 W tryptophan          1.1          5           2
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   POTE ankyrin domain family, member A isoform 1 [Homo... 
POTEA                 0.976   POTE ankyrin domain family, member A isoform 2 [Homo...
LOC100287399          0.570   PREDICTED: hypothetical protein XP_002343353 
POTEC                 0.569   ANKRD26-like family B, member 2 
POTEB                 0.569   protein expressed in prostate, ovary, testis, and pl...
POTED                 0.568   pote protein 
LOC100288966          0.566   PREDICTED: hypothetical protein XP_002343914 isofor...
LOC100288966          0.564   PREDICTED: hypothetical protein XP_002343915 isofor...
ACTBL3                0.561   PREDICTED: actin, beta-like 3 
POTEF                 0.561   prostate, ovary, testis expressed protein on chromo...
LOC653269             0.560   PREDICTED: similar to protein expressed in prostate...
ACTBL3                0.560   PREDICTED: kappa-actin 
LOC653781             0.560   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.559   PREDICTED: similar to protein expressed in prostate,...
POTEE                 0.559   protein expressed in prostate, ovary, testis, and p...
ACTBL3                0.558   PREDICTED: actin, beta-like 3 
POTEH                 0.551   ANKRD26-like family C, member 3 
POTEG                 0.547   POTE ankyrin domain family, member G 
P704P                 0.547   prostate-specific P704P 
ANKRD62               0.316   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.316   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.316   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD26               0.269   ankyrin repeat domain 26 
ANKRD18B              0.182   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.182   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.181   PREDICTED: ankyrin repeat domain 18B 
ANKRD20A4             0.178   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.178   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.178   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.177   ankyrin repeat domain 20 family, member A1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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