Guide to the Human Genome
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Name: GPR139 Sequence: fasta or formatted (353aa) NCBI GI: 50897278
Description:

G protein-coupled receptor 139

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         24           3
 C cysteine            2.5          9           1
 D aspartate           2.3          8           1
 E glutamate           1.4          5           1
 F phenylalanine       6.2         22           2
 G glycine             2.3          8           1
 H histidine           3.7         13           2
 I isoleucine         11.0         39           2
 K lysine              4.2         15           1
 L leucine            11.0         39           3
 M methionine          2.3          8           1
 N asparagine          4.2         15           1
 P proline             5.1         18           1
 Q glutamine           2.5          9           1
 R arginine            3.7         13           2
 S serine              8.5         30           2
 T threonine           6.5         23           2
 V valine              7.1         25           2
 W tryptophan          2.8         10           2
 Y tyrosine            5.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 139 
GPR142                0.374   G protein-coupled receptor 142 
CCR1                  0.079   chemokine (C-C motif) receptor 1 
CXCR4                 0.074   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.074   chemokine (C-X-C motif) receptor 4 isoform a 
SSTR4                 0.074   somatostatin receptor 4 
SSTR1                 0.071   somatostatin receptor 1 
CCR3                  0.070   CC chemokine receptor 3 
CCR3                  0.070   CC chemokine receptor 3 
NMUR2                 0.070   neuromedin U receptor 2 
OPRL1                 0.069   opiate receptor-like 1 
OPRL1                 0.069   opiate receptor-like 1 
BRS3                  0.067   bombesin-like receptor 3 
OPRD1                 0.063   opioid receptor, delta 1 
CCR8                  0.063   chemokine (C-C motif) receptor 8 
CCR5                  0.060   chemokine (C-C motif) receptor 5 
CCR5                  0.060   chemokine (C-C motif) receptor 5 
BDKRB1                0.059   bradykinin receptor B1 
GRPR                  0.059   gastrin-releasing peptide receptor 
LOC100293905          0.059   PREDICTED: similar to gastrin-releasing peptide rec...
GPR183                0.057   EBV-induced G protein-coupled receptor 2 
NMBR                  0.057   neuromedin B receptor 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.057   opioid receptor, mu 1 isoform MOR-1B4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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