Guide to the Human Genome
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Name: GPR142 Sequence: fasta or formatted (462aa) NCBI GI: 32401433
Description:

G protein-coupled receptor 142

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         50           2
 C cysteine            1.7          8           1
 D aspartate           3.5         16           1
 E glutamate           3.5         16           2
 F phenylalanine       2.8         13           1
 G glycine             5.6         26           2
 H histidine           3.7         17           2
 I isoleucine          4.8         22           3
 K lysine              2.2         10           1
 L leucine            11.7         54           2
 M methionine          2.6         12           2
 N asparagine          1.5          7           2
 P proline             6.3         29           2
 Q glutamine           3.9         18           1
 R arginine            7.6         35           3
 S serine              7.4         34           3
 T threonine           6.7         31           2
 V valine              8.7         40           2
 W tryptophan          2.4         11           2
 Y tyrosine            2.8         13           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 142 
GPR139                0.289   G protein-coupled receptor 139 
CCR1                  0.041   chemokine (C-C motif) receptor 1 
GPR31                 0.040   G protein-coupled receptor 31 
SSTR4                 0.038   somatostatin receptor 4 
GPR81                 0.038   G protein-coupled receptor 81 
CX3CR1                0.035   chemokine (C-X3-C motif) receptor 1 
CCR3                  0.035   CC chemokine receptor 3 
CCR3                  0.035   CC chemokine receptor 3 
F2RL3                 0.035   coagulation factor II (thrombin) receptor-like 3 pre...
SSTR5                 0.034   somatostatin receptor 5 
OPRD1                 0.034   opioid receptor, delta 1 
MC1R                  0.033   melanocortin 1 receptor 
OPRL1                 0.032   opiate receptor-like 1 
OPRL1                 0.032   opiate receptor-like 1 
CCR10                 0.032   CC chemokine receptor 10 
AVPR2                 0.032   arginine vasopressin receptor 2 isoform 1 
LTB4R2                0.032   leukotriene B4 receptor 2 
GPER                  0.032   G protein-coupled receptor 30 
GPER                  0.032   G protein-coupled receptor 30 
GPER                  0.032   G protein-coupled receptor 30 
BDKRB1                0.031   bradykinin receptor B1 
P2RY8                 0.030   G-protein coupled purinergic receptor P2Y8 
AVPR2                 0.030   arginine vasopressin receptor 2 isoform 2 
NMUR1                 0.030   neuromedin U receptor 1 
GALR3                 0.029   galanin receptor 3 
AVPR1B                0.029   arginine vasopressin receptor 1B 
CXCR5                 0.028   Burkitt lymphoma receptor 1 isoform 1 
CXCR5                 0.028   Burkitt lymphoma receptor 1 isoform 2 
GPR19                 0.028   G protein-coupled receptor 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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