Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PUS7 Sequence: fasta or formatted (661aa) NCBI GI: 50727002
Description:

pseudouridylate synthase 7 homolog

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         35           2
 C cysteine            0.9          6           1
 D aspartate           6.2         41           2
 E glutamate           8.6         57           6
 F phenylalanine       3.0         20           1
 G glycine             6.2         41           2
 H histidine           2.1         14           1
 I isoleucine          6.1         40           3
 K lysine              8.8         58           2
 L leucine             8.5         56           2
 M methionine          3.0         20           2
 N asparagine          4.8         32           2
 P proline             4.2         28           2
 Q glutamine           3.6         24           2
 R arginine            4.7         31           1
 S serine              6.4         42           2
 T threonine           5.9         39           2
 V valine              6.8         45           2
 W tryptophan          0.9          6           1
 Y tyrosine            3.9         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pseudouridylate synthase 7 homolog 
PUS7L                 0.150   pseudouridylate synthase 7 homolog (S. cerevisiae)-...
PUS7L                 0.150   pseudouridylate synthase 7 homolog (S. cerevisiae)-...
PUS7L                 0.150   pseudouridylate synthase 7 homolog (S. cerevisiae)-...
MYST4                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L2                0.012   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.012   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SLC24A1               0.012   solute carrier family 24 (sodium/potassium/calcium ex...
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MLL4                  0.011   myeloid/lymphoid or mixed-lineage leukemia 4 
EIF5B                 0.010   eukaryotic translation initiation factor 5B 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
ZBTB7C                0.009   zinc finger and BTB domain containing 7C 
SUPT5H                0.009   suppressor of Ty 5 homolog isoform b 
MYH15                 0.009   myosin, heavy polypeptide 15 
CENPB                 0.009   centromere protein B 
CHGA                  0.009   chromogranin A precursor 
LOC100289089          0.008   PREDICTED: hypothetical protein XP_002343359 
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.008   euchromatic histone-lysine N-methyltransferase 2 is...
KIAA1529              0.008   hypothetical protein LOC57653 
C3orf44               0.008   hypothetical protein LOC131831 
L1TD1                 0.008   LINE-1 type transposase domain containing 1 
TTBK1                 0.008   tau tubulin kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press