BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|50659059 lysocardiolipin acyltransferase 1 isoform 2 [Homo sapiens] (376 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|42558246 lysocardiolipin acyltransferase 1 isoform 1 [Homo sa... 790 0.0 gi|50659059 lysocardiolipin acyltransferase 1 isoform 2 [Homo sa... 790 0.0 gi|61743952 1-acylglycerol-3-phosphate O-acyltransferase 5 [Homo... 114 1e-25 gi|83267874 1-acylglycerol-3-phosphate O-acyltransferase 3 [Homo... 110 2e-24 gi|9910394 1-acylglycerol-3-phosphate O-acyltransferase 3 [Homo ... 110 2e-24 gi|9910392 1-acylglycerol-3-phosphate O-acyltransferase 4 [Homo ... 109 5e-24 gi|7661996 lysophosphatidylglycerol acyltransferase 1 [Homo sapi... 68 1e-11 gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo ... 32 1.2 gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo... 32 1.2 gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens] 31 1.6 gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens] 31 1.6 gi|17998700 phosphatidylinositol glycan anchor biosynthesis, cla... 30 3.5 gi|41350212 bromodomain containing 7 [Homo sapiens] 30 4.6 gi|23397648 phosphatidylinositol glycan anchor biosynthesis, cla... 29 7.9 >gi|42558246 lysocardiolipin acyltransferase 1 isoform 1 [Homo sapiens] Length = 414 Score = 790 bits (2039), Expect = 0.0 Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET 60 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET Sbjct: 39 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET 98 Query: 61 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG 120 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG Sbjct: 99 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG 158 Query: 121 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF 180 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF Sbjct: 159 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF 218 Query: 181 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP 240 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP Sbjct: 219 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP 278 Query: 241 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS 300 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS Sbjct: 279 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS 338 Query: 301 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC 360 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC Sbjct: 339 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC 398 Query: 361 YRLLHKQPHLNSKKNE 376 YRLLHKQPHLNSKKNE Sbjct: 399 YRLLHKQPHLNSKKNE 414 >gi|50659059 lysocardiolipin acyltransferase 1 isoform 2 [Homo sapiens] Length = 376 Score = 790 bits (2039), Expect = 0.0 Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET 60 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET Sbjct: 1 MVSWKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLET 60 Query: 61 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG 120 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG Sbjct: 61 MFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPG 120 Query: 121 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF 180 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF Sbjct: 121 FGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAF 180 Query: 181 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP 240 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP Sbjct: 181 AEKNGLQKYEYVLHPRTTGFTFVVDRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFP 240 Query: 241 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS 300 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS Sbjct: 241 REIHFHVHRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKS 300 Query: 301 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC 360 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC Sbjct: 301 ELRVLVVKLLSILYWTLFSPAMCLLIYLYSLVKWYFIITIVIFVLQERIFGGLEIIELAC 360 Query: 361 YRLLHKQPHLNSKKNE 376 YRLLHKQPHLNSKKNE Sbjct: 361 YRLLHKQPHLNSKKNE 376 >gi|61743952 1-acylglycerol-3-phosphate O-acyltransferase 5 [Homo sapiens] Length = 364 Score = 114 bits (285), Expect = 1e-25 Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 21/284 (7%) Query: 24 MLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIM 83 +LS FLP F Y+ +++RL + ++ + E GV++++ GD E + + Sbjct: 37 LLSAFLPARF-----YQALDDRLYCVYQSMVLFFFENYTGVQILLYGDLPKNKENIIYLA 91 Query: 84 NHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSH 143 NH++ +DW+ +R + L + LK LK +P +G I++ R K ++ Sbjct: 92 NHQSTVDWIVADILAIRQNALGHVRYVLKEGLKWLPLYGCYFAQHGGIYVKRSAKFNEKE 151 Query: 144 FEDMIDYFCDIHEPLQLLIFPEGTDLT-ENSK--SRSNAFAEKNGLQKYEYVLHPRTTGF 200 + + + D P+ L+IFPEGT E +K S S AFA + GL ++VL PR Sbjct: 152 MRNKLQSYVDAGTPMYLVIFPEGTRYNPEQTKVLSASQAFAAQRGLAVLKHVLTPRIKAT 211 Query: 201 TFVVDRLREGKNLDAVHDITVAYPHNIPQSEK-------HLLQGDFPREIHFHVHRYPID 253 D ++ LDA++D+TV Y ++ L + P+ IH H+ R Sbjct: 212 HVAFDCMK--NYLDAIYDVTVVYEGKDDGGQRRESPTMTEFLCKECPK-IHIHIDRIDKK 268 Query: 254 TLPTSKEDLQLWCHKRWEEKEERLRSFYQG---EKNFYFTGQSV 294 +P +E ++ W H+R+E K++ L FY+ E+ F G+SV Sbjct: 269 DVPEEQEHMRRWLHERFEIKDKMLIEFYESPDPERRKRFPGKSV 312 >gi|83267874 1-acylglycerol-3-phosphate O-acyltransferase 3 [Homo sapiens] Length = 376 Score = 110 bits (275), Expect = 2e-24 Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 18/322 (5%) Query: 29 LPLMFVNPSWYRWINNRLVATWLTLPVALLETMFGVK-VIITGDAFVPG---ERSVIIMN 84 L L V+ YR +N RL + + V LLE + + T A V E +VII+N Sbjct: 36 LALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILN 95 Query: 85 HRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHF 144 H +D++ W R+ L K+ K L VP GW +F RKW++D+ Sbjct: 96 HNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTV 155 Query: 145 EDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVV 204 + + D E + L++ EGT TE S A GL +Y L PRT GFT V Sbjct: 156 VEGLRRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAV 215 Query: 205 DRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFPREIHFHVHRYPIDTLPTSKEDLQL 264 LR + AV+D+T+ + N S +L G E V R+P++ +P +++ Sbjct: 216 KCLR--GTVAAVYDVTLNFRGNKNPSLLGILYGK-KYEADMCVRRFPLEDIPLDEKEAAQ 272 Query: 265 WCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKLLSILYWT--LFSPAM 322 W HK ++EK + L+ Y + F G+ P + LL+ L W L SP Sbjct: 273 WLHKLYQEK-DALQEIY--NQKGMFPGEQFKPARRP------WTLLNFLSWATILLSPLF 323 Query: 323 CLLIYLYSLVKWYFIITIVIFV 344 ++ +++ I+T + FV Sbjct: 324 SFVLGVFASGSPLLILTFLGFV 345 >gi|9910394 1-acylglycerol-3-phosphate O-acyltransferase 3 [Homo sapiens] Length = 376 Score = 110 bits (275), Expect = 2e-24 Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 18/322 (5%) Query: 29 LPLMFVNPSWYRWINNRLVATWLTLPVALLETMFGVK-VIITGDAFVPG---ERSVIIMN 84 L L V+ YR +N RL + + V LLE + + T A V E +VII+N Sbjct: 36 LALWPVSKQLYRRLNCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILN 95 Query: 85 HRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHF 144 H +D++ W R+ L K+ K L VP GW +F RKW++D+ Sbjct: 96 HNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTV 155 Query: 145 EDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVV 204 + + D E + L++ EGT TE S A GL +Y L PRT GFT V Sbjct: 156 VEGLRRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAV 215 Query: 205 DRLREGKNLDAVHDITVAYPHNIPQSEKHLLQGDFPREIHFHVHRYPIDTLPTSKEDLQL 264 LR + AV+D+T+ + N S +L G E V R+P++ +P +++ Sbjct: 216 KCLR--GTVAAVYDVTLNFRGNKNPSLLGILYGK-KYEADMCVRRFPLEDIPLDEKEAAQ 272 Query: 265 WCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKLLSILYWT--LFSPAM 322 W HK ++EK + L+ Y + F G+ P + LL+ L W L SP Sbjct: 273 WLHKLYQEK-DALQEIY--NQKGMFPGEQFKPARRP------WTLLNFLSWATILLSPLF 323 Query: 323 CLLIYLYSLVKWYFIITIVIFV 344 ++ +++ I+T + FV Sbjct: 324 SFVLGVFASGSPLLILTFLGFV 345 >gi|9910392 1-acylglycerol-3-phosphate O-acyltransferase 4 [Homo sapiens] Length = 378 Score = 109 bits (272), Expect = 5e-24 Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 21/318 (6%) Query: 34 VNPSWYRWINNRLVATWLTLPVALLETMFGVKVIITGD--AFVP--GERSVIIMNHRTRM 89 +N +R IN RL + V LLE G + I D A++ E +++++NH+ + Sbjct: 41 INKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEI 100 Query: 90 DWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMID 149 D++ W+ R+ L K+ K L VP GW +F RKW+ D+ + Sbjct: 101 DFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQ 160 Query: 150 YFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRLRE 209 + D E LI EGT TE S A GL + ++ L PRT GF V LR Sbjct: 161 HLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLR- 219 Query: 210 GKNLDAVHDITVAYPHNIPQSEKHLLQGDFPREIH--FHVHRYPIDTLPTSKEDLQLWCH 267 + AV+D T+ + +N + +L G ++ H +V R P++ +P ++ W H Sbjct: 220 -NVVSAVYDCTLNFRNNENPTLLGVLNG---KKYHADLYVRRIPLEDIPEDDDECSAWLH 275 Query: 268 KRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKLLSILYWTLFSPAMCLLIY 327 K ++EK+ +Y + F ++PP + V + S++ + F + Sbjct: 276 KLYQEKDAFQEEYY---RTGTFPETPMVPPRRPWTLVNWLFWASLVLYPFFQ-------F 325 Query: 328 LYSLVKWYFIITIVIFVL 345 L S+++ +T+ F+L Sbjct: 326 LVSMIRSGSSLTLASFIL 343 >gi|7661996 lysophosphatidylglycerol acyltransferase 1 [Homo sapiens] Length = 370 Score = 68.2 bits (165), Expect = 1e-11 Identities = 79/326 (24%), Positives = 133/326 (40%), Gaps = 44/326 (13%) Query: 41 WINNRLVATWLTLPVALLETMFGVKVIITGDAF--VPGERSVIIMNHRTRMDWMFLWNCL 98 W ++ WL VA G V+ G+ V + +V+++NH+ D L CL Sbjct: 55 WYIEGIMYKWLLGMVASWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCL 114 Query: 99 MRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIH--RKWKDD-----KSHFEDMIDYF 151 + + + L + FG FI R ++D K H E+ Sbjct: 115 QDKGLVVAQMMWLMDHIFKYTNFGIVSLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRS- 173 Query: 152 CDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVLHPRTTGFTFVVDRL---- 207 + +++FPEG L + ++ S AFA+KN L V PR+ +++ L Sbjct: 174 ---RDRKWIVLFPEGGFLRKRRET-SQAFAKKNNLPFLTNVTLPRSGATKIILNALVAQQ 229 Query: 208 --------------REGKNLDAVHDITVAYPHNIP-QSEKHLLQGDFPREIHFHVHRYPI 252 + K L + D T+AYP P + +L P H H +PI Sbjct: 230 KNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVTHVHYRIFPI 289 Query: 253 DTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCKSELRVLVVKL-LS 311 +P +DL W ++R+ EKE+ L FY+ TG PP K + ++ LS Sbjct: 290 KDVPLETDDLTTWLYQRFVEKEDLLSHFYE-------TG--AFPPSKGHKEAVSREMTLS 340 Query: 312 ILYWTLFSPAMCLLIYL-YSLVKWYF 336 L+ L L Y+ Y+++++++ Sbjct: 341 NLWIFLIQSFAFLSGYMWYNIIQYFY 366 >gi|5453718 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo sapiens] Length = 283 Score = 31.6 bits (70), Expect = 1.2 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Query: 51 LTLPVALLETMFGVKVIITG-DAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKI 109 L L + ++ ++G++V + G F P + V++ NH++ +D + + L R I Sbjct: 69 LRLMLLHIKYLYGIRVEVRGAHHFPPSQPYVVVSNHQSSLDLLGMMEVLPG----RCVPI 124 Query: 110 CLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGT 167 K L G A A IFI RK D + + + +++ +FPEGT Sbjct: 125 A-KRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTL-LTQDVRVWVFPEGT 180 >gi|15100175 1-acylglycerol-3-phosphate O-acyltransferase 1 [Homo sapiens] Length = 283 Score = 31.6 bits (70), Expect = 1.2 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Query: 51 LTLPVALLETMFGVKVIITG-DAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKI 109 L L + ++ ++G++V + G F P + V++ NH++ +D + + L R I Sbjct: 69 LRLMLLHIKYLYGIRVEVRGAHHFPPSQPYVVVSNHQSSLDLLGMMEVLPG----RCVPI 124 Query: 110 CLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGT 167 K L G A A IFI RK D + + + +++ +FPEGT Sbjct: 125 A-KRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTL-LTQDVRVWVFPEGT 180 >gi|24475849 hypothetical protein LOC203228 isoform b [Homo sapiens] Length = 222 Score = 31.2 bits (69), Expect = 1.6 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Query: 242 EIHFHV--HRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCK 299 E+ F++ HR +D L ++W HK +E +++ +G + GQS+IP Sbjct: 120 ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKI--ILEGTERMEDQGQSIIPMLT 177 Query: 300 SELRVLVVKLLS 311 E+ + V++LLS Sbjct: 178 GEV-IPVMELLS 188 >gi|37039612 hypothetical protein LOC203228 isoform a [Homo sapiens] Length = 481 Score = 31.2 bits (69), Expect = 1.6 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Query: 242 EIHFHV--HRYPIDTLPTSKEDLQLWCHKRWEEKEERLRSFYQGEKNFYFTGQSVIPPCK 299 E+ F++ HR +D L ++W HK +E +++ +G + GQS+IP Sbjct: 120 ELSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKI--ILEGTERMEDQGQSIIPMLT 177 Query: 300 SELRVLVVKLLS 311 E+ + V++LLS Sbjct: 178 GEV-IPVMELLS 188 >gi|17998700 phosphatidylinositol glycan anchor biosynthesis, class U [Homo sapiens] Length = 435 Score = 30.0 bits (66), Expect = 3.5 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 17/123 (13%) Query: 23 FMLSPFLPLMFVNPSWYRWINNRLVATWLTLPV---ALLETMF----GVKVIITGDAFVP 75 ++L+P+ L V S INN L+A ++ + A L +F + + FVP Sbjct: 144 YLLNPYTILSCVAKSTCA-INNTLIAFFILTTIKGSAFLSAIFLALATYQSLYPLTLFVP 202 Query: 76 G-----ERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAY 130 G +R I + +++ W+F W M Y + ICL L W A Y Sbjct: 203 GLLYLLQRQYIPVKMKSKAFWIFSWEYAMMYVGSLVVIICLSFFLLS----SWDFIPAVY 258 Query: 131 IFI 133 FI Sbjct: 259 GFI 261 >gi|41350212 bromodomain containing 7 [Homo sapiens] Length = 651 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 10/61 (16%) Query: 134 HRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTE----NSKSRSNAFAEKNGLQKY 189 H+K K DK +E+ ++ +PL+L++ G ++TE +S S+ F +KN K+ Sbjct: 5 HKKHKSDKHLYEEYVE------KPLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDHDKH 58 Query: 190 E 190 + Sbjct: 59 K 59 >gi|23397648 phosphatidylinositol glycan anchor biosynthesis, class O isoform 1 [Homo sapiens] Length = 1089 Score = 28.9 bits (63), Expect = 7.9 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 20 GSIFMLSPFLPLMFVNPSWYRWINNRLVATWLTLPVALLETMFGVKVIITGDAFVPGE 77 G++ +S FLP ++ +W W + R +AT +P +L + + D+FV E Sbjct: 514 GAVAAVSSFLPFLW--KAWAGWGSKRPLATLFPIPGPVLLLLLFRLAVFFSDSFVVAE 569 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.328 0.142 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,798,201 Number of Sequences: 37866 Number of extensions: 647519 Number of successful extensions: 1782 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1767 Number of HSP's gapped (non-prelim): 15 length of query: 376 length of database: 18,247,518 effective HSP length: 104 effective length of query: 272 effective length of database: 14,309,454 effective search space: 3892171488 effective search space used: 3892171488 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.