Guide to the Human Genome
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Name: PIGO Sequence: fasta or formatted (1089aa) NCBI GI: 23397648
Description:

phosphatidylinositol glycan anchor biosynthesis, class O isoform 1

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [672aa] phosphatidylinositol glycan anchor biosynthesis, class O isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3        123           2
 C cysteine            1.5         16           1
 D aspartate           2.8         30           2
 E glutamate           3.9         43           5
 F phenylalanine       5.8         63           3
 G glycine             7.4         81           2
 H histidine           3.0         33           2
 I isoleucine          3.0         33           1
 K lysine              2.4         26           2
 L leucine            16.3        177           5
 M methionine          2.1         23           1
 N asparagine          1.5         16           1
 P proline             7.4         81           2
 Q glutamine           4.3         47           2
 R arginine            4.8         52           2
 S serine              6.8         74           2
 T threonine           4.8         52           3
 V valine              6.9         75           2
 W tryptophan          2.4         26           1
 Y tyrosine            1.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol glycan anchor biosynthesis, cla... 
PIGO                  0.408   phosphatidylinositol glycan anchor biosynthesis, cla...
PIGG                  0.084   phosphatidylinositol glycan anchor biosynthesis, cl...
PIGG                  0.084   phosphatidylinositol glycan anchor biosynthesis, cl...
PIGN                  0.012   phosphatidylinositol glycan anchor biosynthesis, clas...
PIGN                  0.012   phosphatidylinositol glycan anchor biosynthesis, cla...
ENPP7                 0.009   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
ENPP2                 0.007   autotaxin isoform 3 preproprotein 
ENPP2                 0.007   autotaxin isoform 2 preproprotein 
ENPP4                 0.006   ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...
ENPP5                 0.005   ectonucleotide pyrophosphatase/phosphodiesterase 5 (...
ENPP1                 0.004   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
ENPP6                 0.004   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
ACOX3                 0.004   acyl-Coenzyme A oxidase 3 isoform b 
LOC729213             0.003   PREDICTED: similar to ectonucleotide pyrophosphatas...
HCN2                  0.003   hyperpolarization activated cyclic nucleotide-gated...
HCN4                  0.003   hyperpolarization activated cyclic nucleotide-gated p...
ACOX3                 0.003   acyl-Coenzyme A oxidase 3 isoform a 
STS                   0.003   steryl-sulfatase precursor 
CSF2                  0.003   colony stimulating factor 2 precursor 
LOC100134152          0.003   PREDICTED: similar to synaptotagmin XV-b 
IDS                   0.003   iduronate-2-sulfatase isoform a precursor 
SLC12A9               0.003   solute carrier family 12 (potassium/chloride transpo...
SCARB1                0.002   scavenger receptor class B, member 1 isoform 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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