Search of human proteins with 50345984

Search of human proteins with 50345984

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50345984 ATP synthase, H+ transporting, mitochondrial F1
complex, alpha subunit precursor [Homo sapiens]
         (553 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50345984 ATP synthase, H+ transporting, mitochondrial F1 comp...  1059   0.0  
gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 compl...  1059   0.0  
gi|32189394 mitochondrial ATP synthase beta subunit precursor [H...   103   3e-22
gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]                       102   7e-22
gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subu...   101   2e-21
gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Hom...    68   2e-11
gi|239756135 PREDICTED: similar to AGAP002076-PA [Homo sapiens]        34   0.31 
gi|239750666 PREDICTED: hypothetical protein XP_002347503 [Homo ...    34   0.31 
gi|239744976 PREDICTED: hypothetical protein XP_002343322 [Homo ...    34   0.31 
gi|78499633 phospholipase C, eta 2 [Homo sapiens]                      32   1.5  
gi|148612853 ATP-binding cassette, sub-family F (GCN20), member ...    31   2.6  
gi|148613880 hypothetical protein LOC145773 [Homo sapiens]             30   4.4  
gi|31742536 fidgetin-like 1 [Homo sapiens]                             30   7.5  
gi|112789543 fidgetin-like 1 [Homo sapiens]                            30   7.5  

>gi|50345984 ATP synthase, H+ transporting, mitochondrial F1
           complex, alpha subunit precursor [Homo sapiens]
          Length = 553

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 553/553 (100%), Positives = 553/553 (100%)

Query: 1   MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
           MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
Sbjct: 1   MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60

Query: 61  GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
           GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
Sbjct: 61  GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120

Query: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
           NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
Sbjct: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180

Query: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240
           PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
Sbjct: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240

Query: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300
           KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
Sbjct: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300

Query: 301 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 360
           RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
Sbjct: 301 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 360

Query: 361 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420
           GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
Sbjct: 361 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420

Query: 421 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA 480
           AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
Sbjct: 421 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA 480

Query: 481 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL 540
           IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
Sbjct: 481 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL 540

Query: 541 KEIVTNFLAGFEA 553
           KEIVTNFLAGFEA
Sbjct: 541 KEIVTNFLAGFEA 553


>gi|4757810 ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit precursor [Homo sapiens]
          Length = 553

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 553/553 (100%), Positives = 553/553 (100%)

Query: 1   MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60
           MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL
Sbjct: 1   MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERIL 60

Query: 61  GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120
           GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
Sbjct: 61  GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG 120

Query: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
           NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII
Sbjct: 121 NDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180

Query: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240
           PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK
Sbjct: 181 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKK 240

Query: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300
           KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF
Sbjct: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300

Query: 301 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 360
           RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG
Sbjct: 301 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFG 360

Query: 361 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420
           GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
Sbjct: 361 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 420

Query: 421 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA 480
           AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
Sbjct: 421 AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA 480

Query: 481 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL 540
           IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL
Sbjct: 481 IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKL 540

Query: 541 KEIVTNFLAGFEA 553
           KEIVTNFLAGFEA
Sbjct: 541 KEIVTNFLAGFEA 553


>gi|32189394 mitochondrial ATP synthase beta subunit precursor [Homo
           sapiens]
          Length = 529

 Score =  103 bits (258), Expect = 3e-22
 Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
           + + G + L++ G  V  +GA + +PVG E LGR+++ +G  ID +GPI +K    +  +
Sbjct: 111 IAMDGTEGLVR-GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAE 169

Query: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDG 235
           AP  +     +E + TGIK VD L P  +G +  + G    GKT + ++ I N  + + G
Sbjct: 170 APEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 229

Query: 236 SDEKKKLYCIYVAIGQKRSTVAQLVKRLTDA------DAMKYTIVVSATASDAAPLQYLA 289
                  Y ++  +G++      L   + ++      DA     +V    ++    +   
Sbjct: 230 -------YSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 282

Query: 290 PYSGCSMGEYFRD-NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 348
             +G ++ EYFRD  G+  L+  D++ +   A  ++S LL R P    Y   +      +
Sbjct: 283 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 342

Query: 349 LERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 408
            ER          GS+T++  I   A D++   P    +  D    L   +   GI PA+
Sbjct: 343 QERITTTKK----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398

Query: 409 NVGLSVSRV--GSAAQTRAMKQVAGTMKLELAQYREVA-AFAQFGSD-LDAATQQLLSRG 464
           +   S SR+   +   +       G  K+ L  Y+ +    A  G D L    +  +SR 
Sbjct: 399 DPLDSTSRIMDPNIVGSEHYDVARGVQKI-LQDYKSLQDIIAILGMDELSEEDKLTVSRA 457

Query: 465 VRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
            ++   L Q          QVA ++    G++ KL P K T
Sbjct: 458 RKIQRFLSQ--------PFQVAEVFT---GHMGKLVPLKET 487


>gi|19913428 vacuolar H+ATPase B2 [Homo sapiens]
          Length = 511

 Score =  102 bits (255), Expect = 7e-22
 Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 13/296 (4%)

Query: 134 TGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQT 191
           TG I+  PV E++LGRV +  G  ID +GP+       + +    I P  RI   E +QT
Sbjct: 115 TGDILRTPVSEDMLGRVFNGSGKPID-RGPV-VLAEDFLDIMGQPINPQCRIYPEEMIQT 172

Query: 192 GIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ----KRFNDGSDEKKKLYCI-Y 246
           GI A+D +  I RGQ+  I          IA   I  Q    K+  D  D  ++ + I +
Sbjct: 173 GISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQ-ICRQAGLVKKSKDVVDYSEENFAIVF 231

Query: 247 VAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDN-GK 305
            A+G    T         +  +M    +    A+D    + + P    +  E+      K
Sbjct: 232 AAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEK 291

Query: 306 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLT 365
           H L+I  D+S  A A R++S      PGR  +PG ++   + + ERA ++      GS+T
Sbjct: 292 HVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR--NGSIT 349

Query: 366 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAA 421
            +P++     D++  IP     IT+GQI+++ +L  + I P INV  S+SR+  +A
Sbjct: 350 QIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 405


>gi|19913426 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit
           B1 [Homo sapiens]
          Length = 513

 Score =  101 bits (251), Expect = 2e-21
 Identities = 97/362 (26%), Positives = 157/362 (43%), Gaps = 20/362 (5%)

Query: 74  VLSIGDGIARVHGLRNVQAEEMVEFS----SGLKGMSLNLEPDNVGVVVF-GNDKLIKEG 128
           V S+   +  +  ++  Q  E+V F+    +   G  L +      V VF G   +    
Sbjct: 44  VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARK 103

Query: 129 DIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIP--RISVR 186
              + TG I+  PV E++LGRV +  G  ID KGP+       + +    I P  RI   
Sbjct: 104 TTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPV-VMAEDFLDINGQPINPHSRIYPE 161

Query: 187 EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDT------IINQKRFNDGSDEKK 240
           E +QTGI  +D +  I RGQ+  I          IA         +   K   D  D+  
Sbjct: 162 EMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNF 221

Query: 241 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 300
            +  ++ A+G    T             M    +    A+D    + + P    +  E+ 
Sbjct: 222 AI--VFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFL 279

Query: 301 RDN-GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAF 359
                KH L+I  D+S  A A R++S      PGR  +PG ++   + + ERA ++    
Sbjct: 280 AYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGR- 338

Query: 360 GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGS 419
            GGS+T +P++     D++  IP     IT+GQI+++ +L  + I P INV  S+SR+  
Sbjct: 339 -GGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMK 397

Query: 420 AA 421
           +A
Sbjct: 398 SA 399


>gi|19913424 ATPase, H+ transporting, lysosomal V1 subunit A [Homo
           sapiens]
          Length = 617

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 179 IIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDE 238
           +  ++    P+ TG + +D+L P  +G    I G    GKT      +I+Q      + +
Sbjct: 217 VTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKT------VISQSLSKYSNSD 270

Query: 239 KKKLYCIYVAIGQKRSTVAQLVKRLTDA---------DAMKYTIVVSATASDAAPLQYLA 289
                 IYV  G++ + ++++++   +            MK T +V+ T++     +  +
Sbjct: 271 ----VIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREAS 326

Query: 290 PYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL- 348
            Y+G ++ EYFRD G H  ++ D  S+ A A R++S  L   P    YP    YL +RL 
Sbjct: 327 IYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPA---YLGARLA 383

Query: 349 --LERAAK---MNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG 403
              ERA +   + +    GS++ +  +    GD S  + +  + I      L+ +L  + 
Sbjct: 384 SFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRK 443

Query: 404 IRPAINVGLSVSR 416
             P++N  +S S+
Sbjct: 444 HFPSVNWLISYSK 456


>gi|239756135 PREDICTED: similar to AGAP002076-PA [Homo sapiens]
          Length = 522

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 86  GLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEE 145
           GL+ V   + V      + + L L    V VV+     +I +GD V  TGA+V       
Sbjct: 48  GLQGVFGRDSVAIRLIFRFVPLRLLHHPVNVVLAQTTFVIGDGDFVFLTGALVGG----- 102

Query: 146 LLGRVVDALGNAIDGKGPIGSKTRRR 171
             G V DA+G  ++G   +G   RRR
Sbjct: 103 --GNVKDAIGVNVEGNLDLGDPARRR 126


>gi|239750666 PREDICTED: hypothetical protein XP_002347503 [Homo
           sapiens]
          Length = 522

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 86  GLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEE 145
           GL+ V   + V      + + L L    V VV+     +I +GD V  TGA+V       
Sbjct: 48  GLQGVFGRDSVAIRLIFRFVPLRLLHHPVNVVLAQTTFVIGDGDFVFLTGALVGG----- 102

Query: 146 LLGRVVDALGNAIDGKGPIGSKTRRR 171
             G V DA+G  ++G   +G   RRR
Sbjct: 103 --GNVKDAIGVNVEGNLDLGDPARRR 126


>gi|239744976 PREDICTED: hypothetical protein XP_002343322 [Homo
           sapiens]
          Length = 522

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 86  GLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEE 145
           GL+ V   + V      + + L L    V VV+     +I +GD V  TGA+V       
Sbjct: 48  GLQGVFGRDSVAIRLIFRFVPLRLLHHPVNVVLAQTTFVIGDGDFVFLTGALVGG----- 102

Query: 146 LLGRVVDALGNAIDGKGPIGSKTRRR 171
             G V DA+G  ++G   +G   RRR
Sbjct: 103 --GNVKDAIGVNVEGNLDLGDPARRR 126


>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
          Length = 1416

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 145 ELLGRVVDALG-NAIDGKGPI-GSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPI 202
           ++ G+V  ALG   +  +GP  GS      G   P   P +S R   +T      S  P 
Sbjct: 883 DISGKVKQALGLKGLFLRGPKPGSLDSHAAG--RPPARPSVSQRILRRTASAPTKSQKPG 940

Query: 203 GRGQRELIIGDRQTGKTSIAIDTI 226
            RG  EL++G R TG   +A D +
Sbjct: 941 RRGFPELVLGTRDTGSKGVADDVV 964


>gi|148612853 ATP-binding cassette, sub-family F (GCN20), member 3
           [Homo sapiens]
          Length = 709

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 11/121 (9%)

Query: 8   AAVVRALPRRAGLVSRNALGSS----FIAARNF----HASNTHLQKTGTAEMSSILEERI 59
           A V  A  RR GLV RN LG +     +A R+     H S  H+++    + +  L+  +
Sbjct: 196 ADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVL 255

Query: 60  LGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVF 119
                  DL    R L+      R  G    +A E+ E  + L+ +  +  P    V++ 
Sbjct: 256 ESDSVREDLLRRERELTAQIAAGRAEG---SEAAELAEIYAKLEEIEADKAPARASVILA 312

Query: 120 G 120
           G
Sbjct: 313 G 313


>gi|148613880 hypothetical protein LOC145773 [Homo sapiens]
          Length = 368

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 40/196 (20%), Positives = 80/196 (40%), Gaps = 20/196 (10%)

Query: 342 FYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY 401
           F +   ++    KM +  GG  L  L  +E    +++A +          Q+  + E+  
Sbjct: 52  FRIKDDIVNSLQKMQNKGGGDRLARL-FLEEHIRNITAIVK---------QLNRDIEVLQ 101

Query: 402 KGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLL 461
           + IR   N+    +   SA +T  M+Q++G   L     R  A+ A+  ++     + L 
Sbjct: 102 EQIRARDNISYGTN---SALKTLEMRQLSGLGDLRGRVARCDASIARLSAEHKTTYEGL- 157

Query: 462 SRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQA 521
                   L K+ Q + + +E ++      +   L++++ S   +     +SH  S HQ 
Sbjct: 158 ------QHLNKEQQAAKLILETKIKDAEGQISQLLNRVDLSISEQSTKLKMSHRDSNHQL 211

Query: 522 LLGTIRADGKISEQSD 537
            L   +  G + E S+
Sbjct: 212 QLLDTKFKGTVEELSN 227


>gi|31742536 fidgetin-like 1 [Homo sapiens]
          Length = 674

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 349 LERAAKMNDAFGGGSLTAL-------PVIETQAGDVSAYIPTNVISITDGQIFLETELFY 401
           +E+  + +DAF G  +T L       P+   Q  D++   P  V  I     +++ E  +
Sbjct: 593 IEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIA----YIDFENAF 648

Query: 402 KGIRPAIN 409
           + +RP+++
Sbjct: 649 RTVRPSVS 656


>gi|112789543 fidgetin-like 1 [Homo sapiens]
          Length = 674

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 349 LERAAKMNDAFGGGSLTAL-------PVIETQAGDVSAYIPTNVISITDGQIFLETELFY 401
           +E+  + +DAF G  +T L       P+   Q  D++   P  V  I     +++ E  +
Sbjct: 593 IEQIVQQSDAFSGADMTQLCREASLGPIRSLQTADIATITPDQVRPIA----YIDFENAF 648

Query: 402 KGIRPAIN 409
           + +RP+++
Sbjct: 649 RTVRPSVS 656


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,417,818
Number of Sequences: 37866
Number of extensions: 727128
Number of successful extensions: 1556
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 16
length of query: 553
length of database: 18,247,518
effective HSP length: 107
effective length of query: 446
effective length of database: 14,195,856
effective search space: 6331351776
effective search space used: 6331351776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.