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Search of human proteins with 5032187
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5032187 transducer of ERBB2, 1 [Homo sapiens] 702 0.0
gi|7706739 transducer of ERBB2, 2 [Homo sapiens] 363 e-100
gi|4502473 B-cell translocation protein 1 [Homo sapiens] 111 8e-25
gi|5802988 B-cell translocation gene 2 [Homo sapiens] 106 3e-23
gi|28872722 B-cell translocation gene 3 isoform b [Homo sapiens] 87 2e-17
gi|8923958 B-cell translocation gene 4 [Homo sapiens] 79 6e-15
gi|195963406 B-cell translocation gene 3 isoform a [Homo sapiens] 76 4e-14
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens] 55 7e-08
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens] 55 1e-07
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens] 55 1e-07
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens] 55 1e-07
gi|114431236 zinc finger protein 462 [Homo sapiens] 49 5e-06
gi|90903231 huntingtin [Homo sapiens] 46 6e-05
gi|8923842 forkhead box J2 [Homo sapiens] 46 6e-05
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 44 2e-04
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 44 3e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 44 3e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 44 3e-04
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 43 4e-04
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 43 4e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 43 4e-04
gi|116805330 small conductance calcium-activated potassium chann... 43 5e-04
gi|169636435 caudal type homeobox 2 [Homo sapiens] 42 6e-04
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 42 8e-04
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 41 0.002
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 41 0.002
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 41 0.002
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 41 0.002
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 41 0.002
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa... 40 0.002
>gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
Length = 345
Score = 702 bits (1813), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI 60
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
Sbjct: 1 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI 60
Query: 61 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN 120
GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
Sbjct: 61 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN 120
Query: 121 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA 180
GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
Sbjct: 121 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA 180
Query: 181 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP 240
TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
Sbjct: 181 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP 240
Query: 241 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP 300
QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
Sbjct: 241 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP 300
Query: 301 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN 345
LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
Sbjct: 301 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN 345
>gi|7706739 transducer of ERBB2, 2 [Homo sapiens]
Length = 344
Score = 363 bits (932), Expect = e-100
Identities = 206/372 (55%), Positives = 245/372 (65%), Gaps = 60/372 (16%)
Query: 1 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI 60
MQLEI+VALNFIISYLYNKLPRRR ++FGEELERLLKKKYEGHWYPEKP KGSGFRC+HI
Sbjct: 1 MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGFRCVHI 60
Query: 61 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN 120
GE VDPV+E A+K SGL ++DVR N+P++LSVWIDPFEVSYQIGEKG VKVLY+DD+
Sbjct: 61 GEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVKVLYLDDSEGC 120
Query: 121 GC-ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTT 179
G ELDKEIK+SFNP+AQVF+PI SS+S+SPSP FG S SPTF+PRS QP+TFTT
Sbjct: 121 GAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSP--SPTFIPRSAQPITFTT 178
Query: 180 ATFAATKFGSTKMK------------NSGRSNKVARTSPINLGLNVNDLLKQKAISSSMH 227
A+FAATKFGSTKMK +SG + P N LLK K++S SMH
Sbjct: 179 ASFAATKFGSTKMKKGGGAASGGGVASSGAGGQQPPQQPRMARSPTNSLLKHKSLSLSMH 238
Query: 228 SLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFI----------FP 277
SL + P PQ Q LSPNAKEF+ F
Sbjct: 239 SLNFITAN------------------PAPQSQ-------LSPNAKEFVYNGGGSPSLFFD 273
Query: 278 NMQGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGG------LNEKSFVDGLNFSLNN 331
GQGS T G F G + S++FD+ +GG L + FV+GL+++LN
Sbjct: 274 AADGQGSGTPGPFGGSGAGTCN----SSSFDMAQVFGGGANSLFLEKTPFVEGLSYNLNT 329
Query: 332 MQYSNQQFQPVM 343
MQY +QQFQPV+
Sbjct: 330 MQYPSQQFQPVV 341
>gi|4502473 B-cell translocation protein 1 [Homo sapiens]
Length = 171
Score = 111 bits (278), Expect = 8e-25
Identities = 52/112 (46%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Query: 4 EIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIG 61
EI A++FI +L K R++ F + L+ LL + Y+ HW+PEKP KGSG+RCI I
Sbjct: 14 EIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEKPCKGSGYRCIRIN 73
Query: 62 EKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLY 113
K+DP+I QA++ GL ++ LP +L++W+DP+EVSY+IGE G + VLY
Sbjct: 74 HKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGSICVLY 125
>gi|5802988 B-cell translocation gene 2 [Homo sapiens]
Length = 158
Score = 106 bits (265), Expect = 3e-23
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Query: 4 EIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIG 61
EI A+ F+ S L + + +R+ +F L+ L + Y+ HW+PEKP KGSG+RCI I
Sbjct: 12 EIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPSKGSGYRCIRIN 71
Query: 62 EKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENG 121
K+DP+I + + + GL + LP +L++W+DP+EVSY+IGE G + VLY +
Sbjct: 72 HKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSICVLYEEAPLAAS 131
Query: 122 CEL 124
C L
Sbjct: 132 CGL 134
>gi|28872722 B-cell translocation gene 3 isoform b [Homo sapiens]
Length = 252
Score = 87.0 bits (214), Expect = 2e-17
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 17 YNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIG--EKVDPVIEQASKE 74
++KL + V F E+L +L++KY+ HWYPEKP KG +RCI + ++VDP + +A +
Sbjct: 19 HDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACEN 78
Query: 75 SGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDN-NENGCELDKEIKNSFN 133
S + D+ LP++L++W+DP EV + GEK ++ +N +EN E+ +++ + +
Sbjct: 79 SCILYSDL--GLPKELTLWVDPCEVCCRYGEKNNAFIVASFENKDENKDEISRKVTRALD 136
Query: 134 PEAQVFMPISDPASSVSSSPS--PPFGHSAAVSPTF 167
+ S + +S P +AA SP +
Sbjct: 137 KVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASPVY 172
>gi|8923958 B-cell translocation gene 4 [Homo sapiens]
Length = 223
Score = 79.0 bits (193), Expect = 6e-15
Identities = 39/110 (35%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 1 MQLEIQVALNFIISYL--YNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCI 58
M+ EI + F+ + ++KL ++++ F E+L +L + Y HW+ + P KG FRCI
Sbjct: 1 MRDEIATTVFFVTRLVKKHDKLSKQQIEDFAEKLMTILFETYRSHWHSDCPSKGQAFRCI 60
Query: 59 HI--GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEK 106
I + DP++E+A ES +D + LP+++++W+DPFEV + GEK
Sbjct: 61 RINNNQNKDPILERACVESNVDFSHL--GLPKEMTIWVDPFEVCCRYGEK 108
>gi|195963406 B-cell translocation gene 3 isoform a [Homo sapiens]
Length = 296
Score = 76.3 bits (186), Expect = 4e-14
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 17 YNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIG--EKVDPVIEQASKE 74
++KL + V F E+L +L++KY+ HWYPEKP KG +RCI + ++VDP + +A +
Sbjct: 19 HDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRCIRVNKFQRVDPDVLKACEN 78
Query: 75 SGLDIDDVRGNLPQDLSVWIDPFEV 99
S + D+ LP++L++W+DP EV
Sbjct: 79 SCILYSDL--GLPKELTLWVDPCEV 101
>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
Length = 437
Score = 55.5 bits (132), Expect = 7e-08
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 123 ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATF 182
E + E+ +Q P++ P SV++ PP G + PT + T+A
Sbjct: 221 EEELELNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADL 277
Query: 183 AATK-FGSTKMKNSGR-------------------SNKVARTSPINLGLNVNDLLKQKAI 222
+A + F S M + G+ ++++ S +++ N N +K + I
Sbjct: 278 SALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPI 337
Query: 223 SSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
S + G QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 338 SPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 384
>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
Length = 429
Score = 54.7 bits (130), Expect = 1e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 136 AQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATK-FGSTKMKN 194
+Q P++ P SV++ PP G + PT + T+A +A + F S M +
Sbjct: 226 SQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADLSALQGFNSPGMLS 282
Query: 195 SGR-------------------SNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLG 235
G+ ++++ S +++ N N +K + IS + G
Sbjct: 283 LGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 342
Query: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 343 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 376
>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
Length = 497
Score = 54.7 bits (130), Expect = 1e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 136 AQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATK-FGSTKMKN 194
+Q P++ P SV++ PP G + PT + T+A +A + F S M +
Sbjct: 294 SQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADLSALQGFNSPGMLS 350
Query: 195 SGR-------------------SNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLG 235
G+ ++++ S +++ N N +K + IS + G
Sbjct: 351 LGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 410
Query: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 411 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 444
>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
Length = 499
Score = 54.7 bits (130), Expect = 1e-07
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 136 AQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATK-FGSTKMKN 194
+Q P++ P SV++ PP G + PT + T+A +A + F S M +
Sbjct: 296 SQATQPLATPVVSVTTPSLPPQGLVYSAMPTAY---NTDYSLTSADLSALQGFNSPGMLS 352
Query: 195 SGR-------------------SNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLG 235
G+ ++++ S +++ N N +K + IS + G
Sbjct: 353 LGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTPSGFQ 412
Query: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQP PP P P P Q Q ++ SP
Sbjct: 413 QQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSP 446
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 49.3 bits (116), Expect = 5e-06
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 212 NVNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
+++ L + +S S+ G G P QQQQP QPPPPPPPP Q Q P
Sbjct: 508 SISSSLNEGVVSYESSSINGRKSGVMLDPLQQQQPPQPPPPPPPPPPSQPQPLQQPQP 565
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 45.8 bits (107), Expect = 6e-05
Identities = 19/24 (79%), Positives = 19/24 (79%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQ 260
QQQ QQQQQP PPPPPPPPQ Q
Sbjct: 32 QQQQQQQQQPPPPPPPPPPPQLPQ 55
Score = 43.1 bits (100), Expect = 4e-04
Identities = 18/24 (75%), Positives = 18/24 (75%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQ 260
QQQ QQQQQ QPPPPPPPP Q
Sbjct: 29 QQQQQQQQQQQQPPPPPPPPPPPQ 52
Score = 42.7 bits (99), Expect = 5e-04
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQ PPPPPPPP Q Q P
Sbjct: 30 QQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQP 62
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/33 (54%), Positives = 19/33 (57%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQ P PPPPPPP Q + L P
Sbjct: 33 QQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLP 65
Score = 39.7 bits (91), Expect = 0.004
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQ 261
QQQ QQQQQ Q PPPPPPP Q
Sbjct: 28 QQQQQQQQQQQQQPPPPPPPPPPPQ 52
Score = 36.2 bits (82), Expect = 0.044
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 237 QQQPQQQQQPAQPPPPPPPP 256
QQQ QQQQQ Q PPPPPP
Sbjct: 27 QQQQQQQQQQQQQQPPPPPP 46
Score = 30.8 bits (68), Expect = 1.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 237 QQQPQQQQQPAQPPPPPPPP 256
Q QP Q PPPPPPPP
Sbjct: 59 QAQPLLPQPQPPPPPPPPPP 78
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 45.8 bits (107), Expect = 6e-05
Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 212 NVNDLLKQKAISSSMHSLYGLGLGS-----------QQQP---QQQQQPAQPPPPPPPPQ 257
N+ + +K+ SSS H L LG QQQP QQQQQ QPP PPP
Sbjct: 257 NLYKSMLEKSSSSSQHGFSSL-LGDIPPSNNYYMYQQQQPPPPQQQQQQQQPPQPPPQQS 315
Query: 258 QQQQQKTSALSPNA 271
Q QQQ+ A P+A
Sbjct: 316 QPQQQQAPAQGPSA 329
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 43.9 bits (102), Expect = 2e-04
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 240 PQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQ 280
PQQ P Q PPPPPPPQQQQQ P+ + P M+
Sbjct: 754 PQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMK 794
Score = 39.3 bits (90), Expect = 0.005
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQ 261
QQQ QQQ P PP P PPPQQQ Q
Sbjct: 967 QQQLQQQPPPPPPPQPQPPPQQQHQ 991
Score = 38.5 bits (88), Expect = 0.009
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 240 PQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
PQQQQQP PPPPP PQQ S+ P
Sbjct: 770 PQQQQQPPPPPPPPSMPQQAAPAMKSSPPP 799
Score = 38.1 bits (87), Expect = 0.012
Identities = 17/27 (62%), Positives = 17/27 (62%)
Query: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQ 262
S QQ QQQ P PPP P PP QQQ Q
Sbjct: 965 SVQQQLQQQPPPPPPPQPQPPPQQQHQ 991
Score = 36.6 bits (83), Expect = 0.034
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 23/65 (35%)
Query: 240 PQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLS 299
P QQQ Q PPPPPPPQ Q P Q Q P P++L
Sbjct: 964 PSVQQQLQQQPPPPPPPQPQPP---------------PQQQHQ--------PPPRPVHLQ 1000
Query: 300 PLQYS 304
P+Q+S
Sbjct: 1001 PMQFS 1005
Score = 36.6 bits (83), Expect = 0.034
Identities = 21/62 (33%), Positives = 24/62 (38%)
Query: 239 QPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNL 298
Q Q QQQP PPPP P P QQQ + + + F Q G P P
Sbjct: 967 QQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQ 1026
Query: 299 SP 300
P
Sbjct: 1027 QP 1028
Score = 34.3 bits (77), Expect = 0.17
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 240 PQQQQQPAQPPPPPPPPQQQQQQK 263
P QQ P P PPPPP QQQQ+
Sbjct: 752 PVPQQPPPPPQQPPPPPPPQQQQQ 775
Score = 32.3 bits (72), Expect = 0.64
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 237 QQQPQQQQQPAQPPP--PPPPPQQQQQQK 263
Q P Q QQP PPP PPPPQ + Q+
Sbjct: 1010 QPPPPQGQQPPHPPPGQQPPPPQPAKPQQ 1038
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/34 (64%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPN 270
QQQPQQQ QP QP PPPPP QQQ S S N
Sbjct: 1676 QQQPQQQPQP-QPQQPPPPPPPQQQPPLSQCSMN 1708
Score = 37.7 bits (86), Expect = 0.015
Identities = 16/26 (61%), Positives = 17/26 (65%)
Query: 238 QQPQQQQQPAQPPPPPPPPQQQQQQK 263
QQPQ QP P PPPPQQQ QQ+
Sbjct: 1657 QQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 35.8 bits (81), Expect = 0.058
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 237 QQQPQQQQQPAQP------PPPPPPPQQQ----QQQKTSALSPNAKEFIFPNMQGQGS-S 285
Q P QQQ QP PPPPPPPQQQ Q ++ +P P G+ S
Sbjct: 1671 QPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNIS 1730
Query: 286 TNGMFPGD 293
PGD
Sbjct: 1731 IYERIPGD 1738
Score = 33.9 bits (76), Expect = 0.22
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 237 QQQPQQQQQPAQPPP-------PPPPPQQQQQQ 262
Q P QQP PPP PPPP QQ QQQ
Sbjct: 1650 QPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 33.1 bits (74), Expect = 0.37
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 238 QQPQQQQQPA-QPPPPPPPPQQQQQQKTSALSP 269
Q P Q QPA QPPPP PQQQ Q + P
Sbjct: 1660 QPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/34 (64%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPN 270
QQQPQQQ QP QP PPPPP QQQ S S N
Sbjct: 1676 QQQPQQQPQP-QPQQPPPPPPPQQQPPLSQCSMN 1708
Score = 37.7 bits (86), Expect = 0.015
Identities = 16/26 (61%), Positives = 17/26 (65%)
Query: 238 QQPQQQQQPAQPPPPPPPPQQQQQQK 263
QQPQ QP P PPPPQQQ QQ+
Sbjct: 1657 QQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 35.8 bits (81), Expect = 0.058
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 237 QQQPQQQQQPAQP------PPPPPPPQQQ----QQQKTSALSPNAKEFIFPNMQGQGS-S 285
Q P QQQ QP PPPPPPPQQQ Q ++ +P P G+ S
Sbjct: 1671 QPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNIS 1730
Query: 286 TNGMFPGD 293
PGD
Sbjct: 1731 IYERIPGD 1738
Score = 33.9 bits (76), Expect = 0.22
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 237 QQQPQQQQQPAQPPP-------PPPPPQQQQQQ 262
Q P QQP PPP PPPP QQ QQQ
Sbjct: 1650 QPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 33.1 bits (74), Expect = 0.37
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 238 QQPQQQQQPA-QPPPPPPPPQQQQQQKTSALSP 269
Q P Q QPA QPPPP PQQQ Q + P
Sbjct: 1660 QPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 43.5 bits (101), Expect = 3e-04
Identities = 22/34 (64%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPN 270
QQQPQQQ QP QP PPPPP QQQ S S N
Sbjct: 1676 QQQPQQQPQP-QPQQPPPPPPPQQQPPLSQCSMN 1708
Score = 37.7 bits (86), Expect = 0.015
Identities = 16/26 (61%), Positives = 17/26 (65%)
Query: 238 QQPQQQQQPAQPPPPPPPPQQQQQQK 263
QQPQ QP P PPPPQQQ QQ+
Sbjct: 1657 QQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 35.8 bits (81), Expect = 0.058
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 237 QQQPQQQQQPAQP------PPPPPPPQQQ----QQQKTSALSPNAKEFIFPNMQGQGS-S 285
Q P QQQ QP PPPPPPPQQQ Q ++ +P P G+ S
Sbjct: 1671 QPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNIS 1730
Query: 286 TNGMFPGD 293
PGD
Sbjct: 1731 IYERIPGD 1738
Score = 33.9 bits (76), Expect = 0.22
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 237 QQQPQQQQQPAQPPP-------PPPPPQQQQQQ 262
Q P QQP PPP PPPP QQ QQQ
Sbjct: 1650 QPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ 1682
Score = 33.1 bits (74), Expect = 0.37
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 238 QQPQQQQQPA-QPPPPPPPPQQQQQQKTSALSP 269
Q P Q QPA QPPPP PQQQ Q + P
Sbjct: 1660 QPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 43.1 bits (100), Expect = 4e-04
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSP 295
QQQ QQQQQ QP PP PQ QQQQ+ + ++ N P + G ST P +P
Sbjct: 227 QQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPS--GPGPELSGPSTPQKLPVPAP 283
Score = 28.5 bits (62), Expect = 9.2
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 8/31 (25%)
Query: 233 GLGSQQQPQQQQQPAQPPPPPPPPQQQQQQK 263
GL QQQ QQQQQ Q QQQQQQ+
Sbjct: 214 GLQQQQQQQQQQQQQQ--------QQQQQQQ 236
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 43.1 bits (100), Expect = 4e-04
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSP 295
QQQ QQQQQ QP PP PQ QQQQ+ + ++ N P + G ST P +P
Sbjct: 227 QQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPS--GPGPELSGPSTPQKLPVPAP 283
Score = 28.5 bits (62), Expect = 9.2
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 8/31 (25%)
Query: 233 GLGSQQQPQQQQQPAQPPPPPPPPQQQQQQK 263
GL QQQ QQQQQ Q QQQQQQ+
Sbjct: 214 GLQQQQQQQQQQQQQQ--------QQQQQQQ 236
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 43.1 bits (100), Expect = 4e-04
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 13/66 (19%)
Query: 221 AISSSMHSLYGLGLGSQQQPQQQQQPAQP---PPPPPP----------PQQQQQQKTSAL 267
++SS + + +G QQ PQQQQQ QP PPPPP P QQQQQ+
Sbjct: 3177 SLSSPTPAQATMAMGPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKD 3236
Query: 268 SPNAKE 273
S KE
Sbjct: 3237 SEKVKE 3242
Score = 35.4 bits (80), Expect = 0.075
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 110 KVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMP 169
K+ Y D++ E +S N ++ M I P SS S+P P +SA
Sbjct: 2349 KLCYKDEDEEGQ-------DDSQNEDSMDAMEILTPTSSSCSTPMPSQAYSAPAPSANNT 2401
Query: 170 RSTQPLTFTT-----ATF-AATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAIS 223
S+ L T ATF + T+ G K K + + + G +L +Q+
Sbjct: 2402 ASSAFLQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQPNQTQEKQGQPKPELQQQEQPE 2461
Query: 224 SSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPN 270
++ Q+ PQ P+ P PPP P Q S+ SP+
Sbjct: 2462 QKTNT------PQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPS 2502
Score = 33.5 bits (75), Expect = 0.29
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 239 QPQQQQQPAQPPPPPPPP---QQQQQQKTSALSPNAKEFIFPNM 279
+PQ + P PPPPPPPP Q T A+ +A P +
Sbjct: 2033 RPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTI 2076
Score = 31.6 bits (70), Expect = 1.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 240 PQQQQQPAQPPPPPPPP 256
P + Q P PPPPPPPP
Sbjct: 2031 PLRPQTPEPPPPPPPPP 2047
Score = 28.5 bits (62), Expect = 9.2
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 150 SSSPSPPFGHSAAVS---PTFMPRSTQPL-TFTTATFAATKFGSTKMKNSGRSNKVARTS 205
+S S G+S+++S T P ST TFTT+ ++ + S +
Sbjct: 1632 ASGSSNGTGNSSSISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMP 1691
Query: 206 PINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTS 265
P+ + N + ++ L + + S+QQ QQQQQ Q QQQQQQ+
Sbjct: 1692 PLGNPIGANIASPSEPKEANRKKLADM-IASRQQQQQQQQQQQ-------QQQQQQQQAQ 1743
Query: 266 ALS 268
L+
Sbjct: 1744 TLA 1746
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 42.7 bits (99), Expect = 5e-04
Identities = 21/48 (43%), Positives = 24/48 (50%)
Query: 235 GSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQ 282
G +QQ QQQQQ Q PPPP PP QQ +L P + Q Q
Sbjct: 27 GDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQ 74
Score = 30.4 bits (67), Expect = 2.4
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 234 LGSQQQPQQQQQPAQPPPPPPPPQQQQQQ 262
L QQQ QQQQQ QPP P Q Q Q
Sbjct: 66 LQQQQQQQQQQQQQQPPHPLSQLAQLQSQ 94
Score = 28.9 bits (63), Expect = 7.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 238 QQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQ QQQQQ Q PP P Q Q ++ + P
Sbjct: 67 QQQQQQQQQQQQQQPPHPLSQLAQLQSQPVHP 98
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 42.4 bits (98), Expect = 6e-04
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 239 QPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNL 298
Q QQQQQP QPPPPPP P Q Q ++ P SS PG P L
Sbjct: 250 QQQQQQQPPQPPPPPPQPPQPQPGPLRSV---------PEPLSPVSSLQASVPGSVPGVL 300
Query: 299 SP 300
P
Sbjct: 301 GP 302
Score = 34.3 bits (77), Expect = 0.17
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQ 257
QQQ QQ QP PPP PP PQ
Sbjct: 251 QQQQQQPPQPPPPPPQPPQPQ 271
Score = 30.0 bits (66), Expect = 3.2
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 234 LGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
L QQQ Q Q P PP PP P + LSP
Sbjct: 249 LQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEPLSP 284
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 42.0 bits (97), Expect = 8e-04
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Query: 231 GLGLGSQ---QQPQQQQQPAQPPPP---PPPPQQQQQQK 263
GL LG+ QQPQQ QQP QP PP PP PQQ Q Q+
Sbjct: 355 GLSLGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQ 393
Score = 37.7 bits (86), Expect = 0.015
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 238 QQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPL 296
QQPQQ Q P Q PP P PQ QQ Q+ P + + P S + + PG SPL
Sbjct: 371 QQPQQPQPPQQQPPQPQQPQPQQPQQPQQ-PPQQQSHLVP------VSLSNLIPG-SPL 421
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQG 281
QQQ QQQQQ Q QQQQQQ+T A SP P+M G
Sbjct: 1250 QQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDG 1294
Score = 31.2 bits (69), Expect = 1.4
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPL 296
QQQ QQQQQ Q QQQQQQ+ + F P S +G+ G +
Sbjct: 1251 QQQQQQQQQQQQ--------QQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLLAGPTMP 1302
Query: 297 NLSPLQY 303
P Q+
Sbjct: 1303 QAPPQQF 1309
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQG 281
QQQ QQQQQ Q QQQQQQ+T A SP P+M G
Sbjct: 1246 QQQQQQQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDG 1290
Score = 31.2 bits (69), Expect = 1.4
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPL 296
QQQ QQQQQ Q QQQQQQ+ + F P S +G+ G +
Sbjct: 1247 QQQQQQQQQQQQ--------QQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLLAGPTMP 1298
Query: 297 NLSPLQY 303
P Q+
Sbjct: 1299 QAPPQQF 1305
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 240 PQQQQQPAQPPPPPPPPQQ--QQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLN 297
PQQQ P QPPPP PPPQQ + A +P N GSS N P S +
Sbjct: 592 PQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYS 651
Query: 298 LSPLQYS 304
YS
Sbjct: 652 PPQPSYS 658
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 11/70 (15%)
Query: 236 SQQQPQQQQQPAQPPPP--PPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSST---NGMF 290
S + + P Q PPP PPPPQ QQ P P G+ST N
Sbjct: 582 SNNRGSYNRAPQQQPPPQQPPPPQPPPQQ------PPPPPSYSPARNPPGASTYNKNSNI 635
Query: 291 PGDSPLNLSP 300
PG S +P
Sbjct: 636 PGSSANTSTP 645
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 240 PQQQQQPAQPPPPPPPPQQ--QQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLN 297
PQQQ P QPPPP PPPQQ + A +P N GSS N P S +
Sbjct: 692 PQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSANTSTPTVSSYS 751
Query: 298 LSPLQYS 304
YS
Sbjct: 752 PPQPSYS 758
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 11/70 (15%)
Query: 236 SQQQPQQQQQPAQPPPP--PPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSST---NGMF 290
S + + P Q PPP PPPPQ QQ P P G+ST N
Sbjct: 682 SNNRGSYNRAPQQQPPPQQPPPPQPPPQQ------PPPPPSYSPARNPPGASTYNKNSNI 735
Query: 291 PGDSPLNLSP 300
PG S +P
Sbjct: 736 PGSSANTSTP 745
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 236 SQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSP 295
S Q QQQQP P PPPPP QQ SA + F+ ++ G P +
Sbjct: 104 SLQPLPQQQQPLPPQQPPPPPPQQLGSAASAPRTSTSSFLIKDILGDSKPLAACAPYSTS 163
Query: 296 LNL---SPLQYSNA 306
++ +P Q SNA
Sbjct: 164 VSSPHHTPKQESNA 177
>gi|196114999 special AT-rich sequence binding protein 1 [Homo
sapiens]
Length = 763
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/25 (72%), Positives = 18/25 (72%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQ 261
QQQ QQQQQ Q PPPP PQQQ Q
Sbjct: 595 QQQQQQQQQQQQQAPPPPQPQQQPQ 619
Score = 40.0 bits (92), Expect = 0.003
Identities = 19/33 (57%), Positives = 20/33 (60%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQ Q PPPPQ QQQ +T P
Sbjct: 593 QQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLP 625
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 237 QQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSP 269
QQQ QQQQQ Q PPPP QQQ Q L P
Sbjct: 594 QQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPP 626
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,657,213
Number of Sequences: 37866
Number of extensions: 885679
Number of successful extensions: 19810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 10311
Number of HSP's gapped (non-prelim): 5792
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.