Guide to the Human Genome
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Name: PRSS16 Sequence: fasta or formatted (514aa) NCBI GI: 5031993
Description:

protease, serine, 16

Referenced in:

Serine Proteases
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         54           3
 C cysteine            2.1         11           1
 D aspartate           2.7         14           1
 E glutamate           4.3         22           1
 F phenylalanine       3.7         19           1
 G glycine            10.3         53           4
 H histidine           1.9         10           1
 I isoleucine          2.3         12           1
 K lysine              1.4          7           1
 L leucine            15.0         77           3
 M methionine          1.0          5           1
 N asparagine          2.1         11           1
 P proline             5.1         26           1
 Q glutamine           6.6         34           2
 R arginine            6.2         32           2
 S serine             10.5         54           4
 T threonine           3.1         16           1
 V valine              6.8         35           2
 W tryptophan          2.3         12           1
 Y tyrosine            1.9         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protease, serine, 16 
DPP7                  0.142   dipeptidyl peptidase 7 preproprotein 
PRCP                  0.108   prolylcarboxypeptidase isoform 1 preproprotein 
PRCP                  0.104   prolylcarboxypeptidase isoform 2 preproprotein [Hom...
ADAMTS3               0.007   ADAM metallopeptidase with thrombospondin type 1 mot...
MAGIX                 0.007   MAGI family member, X-linked isoform b 
MAGIX                 0.007   MAGI family member, X-linked isoform a 
SLC9A7                0.006   solute carrier family 9, member 7 
ZDHHC1                0.005   zinc finger, DHHC-type containing 1 
NFKB2                 0.005   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.005   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.005   nuclear factor of kappa light polypeptide gene enha...
NAT15                 0.005   N-acetyltransferase 15 
NAT15                 0.005   N-acetyltransferase 15 
NAT15                 0.005   N-acetyltransferase 15 
PEX5L                 0.005   peroxisomal biogenesis factor 5-like 
CROP                  0.005   cisplatin resistance-associated overexpressed protei...
CROP                  0.005   cisplatin resistance-associated overexpressed protei...
GGA2                  0.005   ADP-ribosylation factor binding protein 2 
BEND5                 0.005   BEN domain containing 5 
TCFL5                 0.005   transcription factor-like 5 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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