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Search of human proteins with 5031651
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031651 reproduction 8 [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031651 reproduction 8 [Homo sapiens] 533 e-152
gi|5901948 FAS-associated factor 1 [Homo sapiens] 59 6e-09
gi|24797106 UBX domain containing 8 [Homo sapiens] 44 1e-04
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 39 0.006
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 39 0.006
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 39 0.006
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 39 0.006
gi|38788260 bromodomain PHD finger transcription factor isoform ... 38 0.008
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 37 0.018
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 37 0.018
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 36 0.031
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 36 0.040
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 35 0.069
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 35 0.069
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 35 0.090
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 35 0.090
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 35 0.090
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 35 0.090
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 35 0.090
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 35 0.090
gi|21361517 UBX domain protein 1 [Homo sapiens] 35 0.090
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 34 0.12
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 34 0.12
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 34 0.12
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 34 0.12
gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.12
gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.12
gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens] 34 0.12
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 34 0.15
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.15
>gi|5031651 reproduction 8 [Homo sapiens]
Length = 270
Score = 533 bits (1374), Expect = e-152
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MASRGVVGIFFLSAVPLVCLELRRGIPDIGIKDFLLLCGRILLLLALLTLIISVTTSWLN 60
MASRGVVGIFFLSAVPLVCLELRRGIPDIGIKDFLLLCGRILLLLALLTLIISVTTSWLN
Sbjct: 1 MASRGVVGIFFLSAVPLVCLELRRGIPDIGIKDFLLLCGRILLLLALLTLIISVTTSWLN 60
Query: 61 SFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQ 120
SFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQ
Sbjct: 61 SFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQ 120
Query: 121 MTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDL 180
MTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDL
Sbjct: 121 MTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDL 180
Query: 181 PEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRR 240
PEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRR
Sbjct: 181 PEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRR 240
Query: 241 PLAVEGGQSLEDIGITVDTVLILEEKEQTN 270
PLAVEGGQSLEDIGITVDTVLILEEKEQTN
Sbjct: 241 PLAVEGGQSLEDIGITVDTVLILEEKEQTN 270
>gi|5901948 FAS-associated factor 1 [Homo sapiens]
Length = 650
Score = 58.5 bits (140), Expect = 6e-09
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 112 RKLEERFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQ 171
R+ E + EA++LS L D E RE A+ L + E E
Sbjct: 501 REARENVKREQDEAYRLS----LEADRAKR----EAHEREMAEQFRLEQIRKEQEEEREA 552
Query: 172 PTCKEIPDLPEEPSQ-TAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISL 230
LP EP + AE V + +R PSG L RRFL S Q++FD++ G+
Sbjct: 553 IRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDE 612
Query: 231 YSLSTSFPRRPLA-VEGGQSLEDIGITVDTVLILEEKE 267
Y L ++FPRR + ++ +SL ++ + L LE KE
Sbjct: 613 YKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLEAKE 650
>gi|24797106 UBX domain containing 8 [Homo sapiens]
Length = 445
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 40/206 (19%)
Query: 66 QVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEA 125
Q YL E + E+R + +QQ+ + AS L+ QE + +K EER
Sbjct: 270 QTYLVSERLEREERNQTQVLRQQQDEAYLAS------LRADQEKERKKREER-------- 315
Query: 126 WKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPS 185
K +E Q R QNL ++ +++ LP EPS
Sbjct: 316 -----ERKRRKEEEVQQQKLAEERRR----QNL-----------QEEKERKLECLPPEPS 355
Query: 186 QTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPLAVE 245
E V + + P+ + + RRF S S V+ D++ + + + +FPRR L
Sbjct: 356 PDDPESVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCI 415
Query: 246 GGQ------SLEDIGITVDTVLILEE 265
+ +L++ G++ VL +++
Sbjct: 416 PSEEWPNPPTLQEAGLSHTEVLFVQD 441
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
L+++E++ K+++ +RK+++ Q ++ + + +E +L+K EER L
Sbjct: 381 LRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL--------AL 432
Query: 129 SSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQ 171
S HKL Q SFE N E + L + + E ++
Sbjct: 433 SQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDE 475
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
L+++E++ K+++ +RK+++ Q ++ + + +E +L+K EER L
Sbjct: 381 LRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL--------AL 432
Query: 129 SSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQ 171
S HKL Q SFE N E + L + + E ++
Sbjct: 433 SQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDE 475
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
L+++E++ K+++ +RK+++ Q ++ + + +E +L+K EER L
Sbjct: 381 LRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL--------AL 432
Query: 129 SSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQ 171
S HKL Q SFE N E + L + + E ++
Sbjct: 433 SQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDE 475
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.006
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
L+++E++ K+++ +RK+++ Q ++ + + +E +L+K EER L
Sbjct: 381 LRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL--------AL 432
Query: 129 SSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQ 171
S HKL Q SFE N E + L + + E ++
Sbjct: 433 SQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDE 475
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 38.1 bits (87), Expect = 0.008
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 59 LNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERF 118
+++ KSP+ K++ E E K K ++E + + + ++ P + + K EE
Sbjct: 567 IDNVKSPEETEKDKNE-TENDSKDAEKNREEFEDQSLEKDSDDKT-PDDDPEQGKSEEP- 623
Query: 119 YQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIP 178
T K +S GD T+ TS ETS E + + AE+ E+P
Sbjct: 624 ---TEVGDKGNSVSANLGDNTTNATSEETSPSEGRSPVGCLSETPDSSNMAEKKVASELP 680
Query: 179 -DLPEEPSQTAEEVVTVA 195
D+PEEP++T E T A
Sbjct: 681 QDVPEEPNKTCESSNTSA 698
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 37.0 bits (84), Expect = 0.018
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 58 WLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEER 117
W N +P++ EEE+ R K R + +G+K S+ +N Q+++L+ E
Sbjct: 139 WYNGEDNPEIAAAIEEERASARSK--RSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPD 196
Query: 118 FYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQP----- 172
F + + G K ++ ++ + + + SQ +P L P+PA +P
Sbjct: 197 F--TSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELAT-PAPAWEPQPEPD 253
Query: 173 -----TCKEIPDLPEEPSQTAEE 190
E+ DL EE + EE
Sbjct: 254 ERLEAAACEVNDLGEEEEEEEEE 276
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 37.0 bits (84), Expect = 0.018
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 58 WLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEER 117
W N +P++ EEE+ R K R + +G+K S+ +N Q+++L+ E
Sbjct: 139 WYNGEDNPEIAAAIEEERASARSK--RSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPD 196
Query: 118 FYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQP----- 172
F + + G K ++ ++ + + + SQ +P L P+PA +P
Sbjct: 197 F--TSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELAT-PAPAWEPQPEPD 253
Query: 173 -----TCKEIPDLPEEPSQTAEE 190
E+ DL EE + EE
Sbjct: 254 ERLEAAACEVNDLGEEEEEEEEE 276
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 36.2 bits (82), Expect = 0.031
Identities = 18/77 (23%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 63 KSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMT 122
K+ + ++E+EEK +++++++ +++++ Q ++ + + QE K+R+ EE+ M
Sbjct: 114 KTQEEKMQEQEEKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEK---MQ 170
Query: 123 GEAWKLSSGHKLGGDEG 139
G+ K+ GG+ G
Sbjct: 171 GQEEKMRDVEPAGGEAG 187
Score = 32.3 bits (72), Expect = 0.45
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 16/131 (12%)
Query: 66 QVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENV--LKPHQEMKLRKLEERFYQMTG 123
Q L E++EK ++ + +R+K++ + +K + +E + K QE K+++ EE+ +
Sbjct: 73 QQRLPEQKEKMWEQDERLREKEERMREQKMWQQVEKMREKKKTQEEKMQEQEEKMQEQEE 132
Query: 124 EAWK-----LSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFP---------SPA 169
W+ K+ E + E + K Q + + + SP
Sbjct: 133 MMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMRDVEPAGGEAGEGSPQ 192
Query: 170 EQPTCKEIPDL 180
+ PT +EI L
Sbjct: 193 DNPTAQEIMQL 203
Score = 30.8 bits (68), Expect = 1.3
Identities = 11/59 (18%), Positives = 35/59 (59%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
++E E+K + ++++R+++++ Q ++ + QE K+++ EE+ ++ + W+
Sbjct: 7 MREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWE 65
Score = 28.9 bits (63), Expect = 4.9
Identities = 10/59 (16%), Positives = 35/59 (59%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
++EEEE ++++ +++++++ + ++ + + QE K+ + EE+ ++ + W+
Sbjct: 14 MREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWE 72
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 35.8 bits (81), Expect = 0.040
Identities = 40/134 (29%), Positives = 50/134 (37%), Gaps = 18/134 (13%)
Query: 106 HQEMKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNL----PKP 161
HQ K R ER Y A +GG GT RE K QN
Sbjct: 99 HQSAKQR---ERRYSTVFLALDRDPPESIGGPGGTGGGGSGGGKREDKKLQNAIVNGVLQ 155
Query: 162 LTEFPSPAEQPTCKEIPDLPEEPSQTAEEVVTVALRCPSGNVLRRR--FLKSYSSQVLFD 219
TE S +P C E+ +L PS LR S + LRR+ + Y QV+F
Sbjct: 156 NTENTSKETEPDCLEVKELTPHPS---------GLRTASKSKLRRQEGISRFYIIQVVFR 206
Query: 220 WMTRIGYHISLYSL 233
IG+ + Y L
Sbjct: 207 NALEIGFLVGQYFL 220
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.0 bits (79), Expect = 0.069
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 69 LKEEEEK-------NEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQM 121
++EEEE+ +K Q+ +++ +++ + E+++R + K E KL+KLEE +
Sbjct: 924 VEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQIIL 983
Query: 122 TGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKS 155
+ KL+ KL D T+ T E +KS
Sbjct: 984 EDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKS 1017
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 35.0 bits (79), Expect = 0.069
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLS 129
K+++EK +K++K KK++E + EK R K + + K+E + +L+
Sbjct: 703 KDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKEKHKHEKIKVEPVALAPSPVIPRLT 762
Query: 130 SGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQP 172
G D+ + A SQN PK P+PA P
Sbjct: 763 LRVGAGQDKIVISKVVPAPEAKPAPSQNRPKTPPPAPAPAPGP 805
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 34.7 bits (78), Expect = 0.090
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 19 CLELRRGIPDIGIKDFLLLCGRILLLLALLTLIISVTTSWLNSFKSPQVYLKEEEE---- 74
C+ L + + + +LLC ++ AL+ ++ +W+N F+ Q LK++E+
Sbjct: 1557 CMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVS 1616
Query: 75 -----KNEKRQKLVRKKQQEAQGEKASRY-IENVLKPHQEMKLRKLEERF 118
K + + + ++ QE G Y + L + +K RKL+E F
Sbjct: 1617 ELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1666
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 34.7 bits (78), Expect = 0.090
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 19 CLELRRGIPDIGIKDFLLLCGRILLLLALLTLIISVTTSWLNSFKSPQVYLKEEEE---- 74
C+ L + + + +LLC ++ AL+ ++ +W+N F+ Q LK++E+
Sbjct: 1595 CMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVS 1654
Query: 75 -----KNEKRQKLVRKKQQEAQGEKASRY-IENVLKPHQEMKLRKLEERF 118
K + + + ++ QE G Y + L + +K RKL+E F
Sbjct: 1655 ELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIF 1704
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 59 LNSFKSPQVYLKE--EEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
L SF+ V K EEE + +L + +Q+E Q E+ + +E K E +L+ LEE
Sbjct: 274 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAE-ELKLLEE 332
Query: 117 RFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKE 176
+ E K S+ H +Q + + + Q+L +F S + T E
Sbjct: 333 KLKGKEAELEKSSAAH--------TQATLLLQEKYDSMVQSLEDVTAQFES-YKALTASE 383
Query: 177 IPDLPEEPSQTAEE 190
I DL E S E+
Sbjct: 384 IEDLKLENSSLQEK 397
Score = 28.1 bits (61), Expect = 8.4
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 49 TLIISVTTSWLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 108
T I +T S+L Q LK++EE RK+ ++ +G KA + +
Sbjct: 438 TEIKEITVSFLQKITDLQNQLKQQEED-------FRKQLEDEEGRKAEKENTTAELTEEI 490
Query: 109 MKLRKLEERFY------QMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAK---SQNLP 159
K R L E Y Q+ +A+++ L + G +Q AK QNL
Sbjct: 491 NKWRLLYEELYNKTKPFQLQLDAFEVEK-QALLNEHGAAQEQLNKIRDSYAKLLGHQNLK 549
Query: 160 KPLTEFPSPAEQPTCKEIPDLPEEPSQTAEEVVTVALRC 198
+ + K + L +E SQ EV LRC
Sbjct: 550 QKI------------KHVVKLKDENSQLKSEV--SKLRC 574
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 59 LNSFKSPQVYLKE--EEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
L SF+ V K EEE + +L + +Q+E Q E+ + +E K E +L+ LEE
Sbjct: 361 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAE-ELKLLEE 419
Query: 117 RFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKE 176
+ E K S+ H +Q + + + Q+L +F S + T E
Sbjct: 420 KLKGKEAELEKSSAAH--------TQATLLLQEKYDSMVQSLEDVTAQFES-YKALTASE 470
Query: 177 IPDLPEEPSQTAEE 190
I DL E S E+
Sbjct: 471 IEDLKLENSSLQEK 484
Score = 28.1 bits (61), Expect = 8.4
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 49 TLIISVTTSWLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 108
T I +T S+L Q LK++EE RK+ ++ +G KA + +
Sbjct: 525 TEIKEITVSFLQKITDLQNQLKQQEED-------FRKQLEDEEGRKAEKENTTAELTEEI 577
Query: 109 MKLRKLEERFY------QMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAK---SQNLP 159
K R L E Y Q+ +A+++ L + G +Q AK QNL
Sbjct: 578 NKWRLLYEELYNKTKPFQLQLDAFEVEK-QALLNEHGAAQEQLNKIRDSYAKLLGHQNLK 636
Query: 160 KPLTEFPSPAEQPTCKEIPDLPEEPSQTAEEVVTVALRC 198
+ + K + L +E SQ EV LRC
Sbjct: 637 QKI------------KHVVKLKDENSQLKSEV--SKLRC 661
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 59 LNSFKSPQVYLKE--EEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
L SF+ V K EEE + +L + +Q+E Q E+ + +E K E +L+ LEE
Sbjct: 345 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAE-ELKLLEE 403
Query: 117 RFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKE 176
+ E K S+ H +Q + + + Q+L +F S + T E
Sbjct: 404 KLKGKEAELEKSSAAH--------TQATLLLQEKYDSMVQSLEDVTAQFES-YKALTASE 454
Query: 177 IPDLPEEPSQTAEE 190
I DL E S E+
Sbjct: 455 IEDLKLENSSLQEK 468
Score = 28.1 bits (61), Expect = 8.4
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 49 TLIISVTTSWLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 108
T I +T S+L Q LK++EE RK+ ++ +G KA + +
Sbjct: 509 TEIKEITVSFLQKITDLQNQLKQQEED-------FRKQLEDEEGRKAEKENTTAELTEEI 561
Query: 109 MKLRKLEERFY------QMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAK---SQNLP 159
K R L E Y Q+ +A+++ L + G +Q AK QNL
Sbjct: 562 NKWRLLYEELYNKTKPFQLQLDAFEVEK-QALLNEHGAAQEQLNKIRDSYAKLLGHQNLK 620
Query: 160 KPLTEFPSPAEQPTCKEIPDLPEEPSQTAEEVVTVALRC 198
+ + K + L +E SQ EV LRC
Sbjct: 621 QKI------------KHVVKLKDENSQLKSEV--SKLRC 645
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 34.7 bits (78), Expect = 0.090
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 59 LNSFKSPQVYLKE--EEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
L SF+ V K EEE + +L + +Q+E Q E+ + +E K E +L+ LEE
Sbjct: 360 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAE-ELKLLEE 418
Query: 117 RFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKE 176
+ E K S+ H +Q + + + Q+L +F S + T E
Sbjct: 419 KLKGKEAELEKSSAAH--------TQATLLLQEKYDSMVQSLEDVTAQFES-YKALTASE 469
Query: 177 IPDLPEEPSQTAEE 190
I DL E S E+
Sbjct: 470 IEDLKLENSSLQEK 483
Score = 28.1 bits (61), Expect = 8.4
Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 49 TLIISVTTSWLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 108
T I +T S+L Q LK++EE RK+ ++ +G KA + +
Sbjct: 524 TEIKEITVSFLQKITDLQNQLKQQEED-------FRKQLEDEEGRKAEKENTTAELTEEI 576
Query: 109 MKLRKLEERFY------QMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAK---SQNLP 159
K R L E Y Q+ +A+++ L + G +Q AK QNL
Sbjct: 577 NKWRLLYEELYNKTKPFQLQLDAFEVEK-QALLNEHGAAQEQLNKIRDSYAKLLGHQNLK 635
Query: 160 KPLTEFPSPAEQPTCKEIPDLPEEPSQTAEEVVTVALRC 198
+ + K + L +E SQ EV LRC
Sbjct: 636 QKI------------KHVVKLKDENSQLKSEV--SKLRC 660
>gi|21361517 UBX domain protein 1 [Homo sapiens]
Length = 312
Score = 34.7 bits (78), Expect = 0.090
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLS 129
+ E E+ E+R+ L R++Q+ QG++ S + + QE ++R+ E + +A +L+
Sbjct: 106 QREREEREEREALERERQRRRQGQELSAARQRL----QEDEMRRAAEE--RRREKAEELA 159
Query: 130 SGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLP--EEPSQT 187
+ ++ E + E + + + P P+ P P +P P E P++
Sbjct: 160 ARQRV--REKIERDKAERAKKYGGSVGSQPPPVAPEPGP--------VPSSPSQEPPTKR 209
Query: 188 AEEVVTVALRCPSGNVLRRRF 208
+ + +R P G L + F
Sbjct: 210 EYDQCRIQVRLPDGTSLTQTF 230
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 34.3 bits (77), Expect = 0.12
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYI------ENVLKPHQEMKLRKLEER 117
+EEE K + ++L R+KQ+EA + + I E + QE LR+LEER
Sbjct: 767 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEER 820
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
+ EEE+ K+++L+RK+++EA K +R E + +E +LR EE
Sbjct: 821 RREEEERRKQEELLRKQEEEA--AKWAREEEEAQRRLEENRLRMEEE 865
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 34.3 bits (77), Expect = 0.12
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYI------ENVLKPHQEMKLRKLEER 117
+EEE K + ++L R+KQ+EA + + I E + QE LR+LEER
Sbjct: 794 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEER 847
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
+ EEE+ K+++L+RK+++EA K +R E + +E +LR EE
Sbjct: 848 RREEEERRKQEELLRKQEEEA--AKWAREEEEAQRRLEENRLRMEEE 892
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.3 bits (77), Expect = 0.12
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYI------ENVLKPHQEMKLRKLEER 117
+EEE K + ++L R+KQ+EA + + I E + QE LR+LEER
Sbjct: 773 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEER 826
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
+ EEE+ K+++L+RK+++EA K +R E + +E +LR EE
Sbjct: 827 RREEEERRKQEELLRKQEEEA--AKWAREEEEAQRRLEENRLRMEEE 871
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.3 bits (77), Expect = 0.12
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYI------ENVLKPHQEMKLRKLEER 117
+EEE K + ++L R+KQ+EA + + I E + QE LR+LEER
Sbjct: 773 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEER 826
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEE 116
+ EEE+ K+++L+RK+++EA K +R E + +E +LR EE
Sbjct: 827 RREEEERRKQEELLRKQEEEA--AKWAREEEEAQRRLEENRLRMEEE 871
>gi|190684694 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 34.3 bits (77), Expect = 0.12
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 63 KSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMT 122
K+ Q E ++ E+++KL RK++QE + +K EN + Q+ ++E++ +
Sbjct: 475 KNKQEKELRERQQEEQKEKL-RKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQA 533
Query: 123 GEAWKLSS---GHKLGGDEGTSQTSFETSNREAA---KSQNLPKPLTEFPSPAEQP 172
+ K +S G ++ G + S++ ETS+ + + + + P P + S + P
Sbjct: 534 KKEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVP 589
>gi|190684692 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 34.3 bits (77), Expect = 0.12
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 63 KSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMT 122
K+ Q E ++ E+++KL RK++QE + +K EN + Q+ ++E++ +
Sbjct: 475 KNKQEKELRERQQEEQKEKL-RKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQA 533
Query: 123 GEAWKLSS---GHKLGGDEGTSQTSFETSNREAA---KSQNLPKPLTEFPSPAEQP 172
+ K +S G ++ G + S++ ETS+ + + + + P P + S + P
Sbjct: 534 KKEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVP 589
>gi|190684690 ubiquitin specific peptidase 8 [Homo sapiens]
Length = 1118
Score = 34.3 bits (77), Expect = 0.12
Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 63 KSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMT 122
K+ Q E ++ E+++KL RK++QE + +K EN + Q+ ++E++ +
Sbjct: 475 KNKQEKELRERQQEEQKEKL-RKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQA 533
Query: 123 GEAWKLSS---GHKLGGDEGTSQTSFETSNREAA---KSQNLPKPLTEFPSPAEQP 172
+ K +S G ++ G + S++ ETS+ + + + + P P + S + P
Sbjct: 534 KKEDKETSAKRGKEITGVKRQSKSEHETSDAKKSVEDRGKRCPTPEIQKKSTGDVP 589
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 33.9 bits (76), Expect = 0.15
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLS 129
++EE+K EK +K +K+ E + ++ EN + + + E Q T
Sbjct: 516 EKEEDKAEKTEKKEEEKKDEEEKDEKEDSKENTKEKDKIDGTAEETEEREQATPR----- 570
Query: 130 SGHKLGGDEGTSQTSFETS-NREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQTA 188
G K +G + S EAA + TE P P P + I P E S+
Sbjct: 571 -GRKTANSQGRRKGRITRSMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWT 629
Query: 189 EEVVTVA 195
EE + VA
Sbjct: 630 EEEMEVA 636
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.15
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Query: 71 EEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKLSS 130
E+EEK ++++ +R+++++ QG++ + QE K+R+ EE+ + W
Sbjct: 650 EQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMW--GQ 707
Query: 131 GHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLP 181
K+ G E E +E K P E+ C E P LP
Sbjct: 708 EEKMWGQEEKMWGQEEMREKEERIRDQKEKMQERLPEHEER--CSE-PCLP 755
Score = 33.5 bits (75), Expect = 0.20
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
++E+EEK + +++ +R+++++ QG++ QE K+R EE+ + + W
Sbjct: 662 MREQEEKMQGQEEKMREQEEKMQGQEEK-------MREQEEKMRGQEEKMWGQEEKMW-- 712
Query: 129 SSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPT 173
K+ G E + +++ + LP+ P P+
Sbjct: 713 GQEEKMWGQEEMREKEERIRDQKEKMQERLPEHEERCSEPCLPPS 757
Score = 32.0 bits (71), Expect = 0.58
Identities = 13/70 (18%), Positives = 38/70 (54%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWKL 128
++E E+K + ++++R+++++ Q ++ + QE K+++ EE+ ++ + W+
Sbjct: 562 MREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQ 621
Query: 129 SSGHKLGGDE 138
K+ E
Sbjct: 622 EEEDKMQEQE 631
Score = 30.4 bits (67), Expect = 1.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 72 EEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
E+EK + QK +R+++++ Q ++ + QE K+R+ EE+ ++ W+
Sbjct: 294 EQEKELREQKKLREQEEQMQEQEEKMW-------EQEEKMREQEEKMWRQEERLWE 342
Score = 30.4 bits (67), Expect = 1.7
Identities = 14/58 (24%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
+E+E+K +++ +R++++ + EK R E +++ QE K+++ EE+ + + W+
Sbjct: 543 QEQEKKTWDQEEKMREEERMREREKKMREEEEMMR-EQEEKMQEQEEKMREQEEKMWE 599
Score = 30.4 bits (67), Expect = 1.7
Identities = 17/74 (22%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 66 QVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEA 125
+++ +EEE+K +++++++ +++++ Q ++ + + QE K+R+ EE+ M G+
Sbjct: 617 KMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEK---MQGQE 673
Query: 126 WKL-SSGHKLGGDE 138
K+ K+ G E
Sbjct: 674 EKMREQEEKMQGQE 687
Score = 30.0 bits (66), Expect = 2.2
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 69 LKEEEEK-NEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
L+E+E K E+ +K+ R++++ + EK R E L+ ++ KLR+ EE+ + + W+
Sbjct: 264 LREQEGKMREQEEKMRRQEKRLREQEKELREQEKELR--EQKKLREQEEQMQEQEEKMWE 321
Score = 28.5 bits (62), Expect = 6.5
Identities = 13/59 (22%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 127
++ +E++ +++K +R++++E + +K R E ++ QE K+ + EE+ + + W+
Sbjct: 278 MRRQEKRLREQEKELREQEKELREQKKLREQEEQMQ-EQEEKMWEQEEKMREQEEKMWR 335
Score = 28.5 bits (62), Expect = 6.5
Identities = 12/52 (23%), Positives = 32/52 (61%)
Query: 69 LKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQ 120
++E+EEK ++++ +R+++++ ++ + + QE K+R EER ++
Sbjct: 312 MQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWE 363
Score = 28.5 bits (62), Expect = 6.5
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 70 KEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEM------KLRKLEERFYQ--- 120
++EE+ E+ +K+ R++++ + EK R E ++ +E +LR+ EER +
Sbjct: 321 EQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEK 380
Query: 121 MTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTE 164
M + K+ ++ E + ET + K Q + + E
Sbjct: 381 MWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWE 424
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 71 EEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQ 120
E+EEK ++Q+L +K++ + EK E + + QE K+R EE + Q
Sbjct: 424 EQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWE--QEEKIRDQEEMWGQ 471
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,485,056
Number of Sequences: 37866
Number of extensions: 485870
Number of successful extensions: 4844
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 4088
Number of HSP's gapped (non-prelim): 793
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.