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Search of human proteins with 49640014
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|49640014 ubiquitin associated and SH3 domain containing, A
short form [Homo sapiens]
(623 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49640014 ubiquitin associated and SH3 domain containing, A sh... 1278 0.0
gi|9507221 ubiquitin associated and SH3 domain containing, A lon... 1257 0.0
gi|24497612 ubiquitin associated and SH3 domain containing, B [H... 574 e-164
gi|169215201 PREDICTED: similar to Ubiquitin associated and SH3 ... 247 3e-65
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ... 55 3e-07
gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo s... 55 3e-07
gi|21361517 UBX domain protein 1 [Homo sapiens] 49 1e-05
gi|5453758 nebulette sarcomeric isoform [Homo sapiens] 48 2e-05
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 48 2e-05
gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens] 46 9e-05
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 46 9e-05
gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens] 46 9e-05
gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] 46 9e-05
gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens] 46 9e-05
gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens] 46 9e-05
gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens] 46 9e-05
gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens] 46 9e-05
gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens] 46 9e-05
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 46 9e-05
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 45 2e-04
gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo ... 45 2e-04
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ... 45 2e-04
gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo ... 45 2e-04
gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ... 45 2e-04
gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo ... 45 2e-04
gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo s... 45 2e-04
gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo ... 45 2e-04
gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo s... 45 2e-04
gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo s... 45 2e-04
gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo s... 45 2e-04
>gi|49640014 ubiquitin associated and SH3 domain containing, A short
form [Homo sapiens]
Length = 623
Score = 1278 bits (3308), Expect = 0.0
Identities = 623/623 (100%), Positives = 623/623 (100%)
Query: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH
Sbjct: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
Query: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE 120
CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE
Sbjct: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE 120
Query: 121 DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA 180
DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA
Sbjct: 121 DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA 180
Query: 181 SLLADCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHY 240
SLLADCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHY
Sbjct: 181 SLLADCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHY 240
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR
Sbjct: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
Query: 301 ASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSV 360
ASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSV
Sbjct: 301 ASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSV 360
Query: 361 LVVRHGERVDQIFGKAWLQQCSTPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGI 420
LVVRHGERVDQIFGKAWLQQCSTPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGI
Sbjct: 361 LVVRHGERVDQIFGKAWLQQCSTPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGI 420
Query: 421 FQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWE 480
FQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWE
Sbjct: 421 FQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWE 480
Query: 481 AGKTTPTLMSLEELKEANFNIDTDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQ 540
AGKTTPTLMSLEELKEANFNIDTDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQ
Sbjct: 481 AGKTTPTLMSLEELKEANFNIDTDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQ 540
Query: 541 DTGVILIVSHGSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVN 600
DTGVILIVSHGSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVN
Sbjct: 541 DTGVILIVSHGSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVN 600
Query: 601 PPVKTLTHGANAAFNWRNWISGN 623
PPVKTLTHGANAAFNWRNWISGN
Sbjct: 601 PPVKTLTHGANAAFNWRNWISGN 623
>gi|9507221 ubiquitin associated and SH3 domain containing, A long
form [Homo sapiens]
Length = 661
Score = 1257 bits (3252), Expect = 0.0
Identities = 622/661 (94%), Positives = 622/661 (94%), Gaps = 38/661 (5%)
Query: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH
Sbjct: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
Query: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE 120
CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE
Sbjct: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCE 120
Query: 121 DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA 180
DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA
Sbjct: 121 DQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEA 180
Query: 181 SLLAD--------------------------------------CSVKPCTKQLHLTLAHK 202
SLLA CSVKPCTKQLHLTLAHK
Sbjct: 181 SLLAGTSVSRFWIFSQVPGHGPNLRLSNLTRASFVSHYILQKYCSVKPCTKQLHLTLAHK 240
Query: 203 FYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVDELTLSPG 262
FYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVDELTLSPG
Sbjct: 241 FYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVDELTLSPG 300
Query: 263 DYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDRASESDTWVKHRMYTFSLATDLN 322
DYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDRASESDTWVKHRMYTFSLATDLN
Sbjct: 301 DYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDRASESDTWVKHRMYTFSLATDLN 360
Query: 323 SRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSVLVVRHGERVDQIFGKAWLQQCS 382
SRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSVLVVRHGERVDQIFGKAWLQQCS
Sbjct: 361 SRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSVLVVRHGERVDQIFGKAWLQQCS 420
Query: 383 TPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGIFQSRIAGDALLDSGIRISSVFA 442
TPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGIFQSRIAGDALLDSGIRISSVFA
Sbjct: 421 TPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGIFQSRIAGDALLDSGIRISSVFA 480
Query: 443 SPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTLMSLEELKEANFNID 502
SPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTLMSLEELKEANFNID
Sbjct: 481 SPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTLMSLEELKEANFNID 540
Query: 503 TDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLL 562
TDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLL
Sbjct: 541 TDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLL 600
Query: 563 GLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGANAAFNWRNWISG 622
GLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGANAAFNWRNWISG
Sbjct: 601 GLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGANAAFNWRNWISG 660
Query: 623 N 623
N
Sbjct: 661 N 661
>gi|24497612 ubiquitin associated and SH3 domain containing, B [Homo
sapiens]
Length = 649
Score = 574 bits (1479), Expect = e-164
Identities = 291/633 (45%), Positives = 396/633 (62%), Gaps = 17/633 (2%)
Query: 1 MAAGETQLYAKVSNKLKSRSSP------SLLEPLLAMGFPVHTALKALAATGRKTAEEAL 54
MAA E +LY+KV+ + + P S L+ LL+MGFP A KALA+TG ++ + A
Sbjct: 12 MAARE-ELYSKVTPRRNRQQRPGTIKHGSALDVLLSMGFPRARAQKALASTGGRSVQAAC 70
Query: 55 AWLHDHCNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLC 114
WL H DP LDDP+P+EY L+L PTGPL +KL +FW++SK+ C KN+AH +FPH+TLC
Sbjct: 71 DWLFSHVGDPFLDDPLPREYVLYLRPTGPLAQKLSDFWQQSKQICGKNKAHNIFPHITLC 130
Query: 115 DFFTCEDQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAM 174
FF CED KV+ L EAL+ R F +PL L++S +++G FV A+V+++FA
Sbjct: 131 QFFMCEDSKVDALGEALQTTVSRWKCKFSAPLPLELYTSSNFIGLFVKEDSAEVLKKFAA 190
Query: 175 TFATEASLLADCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLGHSCQWTAALYSRD 234
FA EA+ + V+P KQLH+TLA+ F H TLE+LA+ I + C W A ++SRD
Sbjct: 191 DFAAEAASKTEVHVEPHKKQLHVTLAYHFQASHLPTLEKLAQNIDVKLGCDWVATIFSRD 250
Query: 235 MRFVHYQTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLP 294
+RF +++TL+ ++ Y PQN DEL L PGD+IF+ P +Q SEGW+ G S TGC G LP
Sbjct: 251 IRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLP 310
Query: 295 ENYTDRASESDTWVKHRMYTFSLATDLNSRKDGEA-------SSRCSGEFLPQT--ARSL 345
ENY +A E TW+ H Y+ + NS G+ + GE P T + +
Sbjct: 311 ENYITKADECSTWIFHGSYSILNTSSSNSLTFGDGVLERRPYEDQGLGETTPLTIICQPM 370
Query: 346 SSLQA-LQATVARKSVLVVRHGERVDQIFGKAWLQQCSTPDGKYYRPDLNFPCSLPRRSR 404
L+ Q ++ + V RHGER+D +FGK WL QC G+Y R +LN P SLP+RS
Sbjct: 371 QPLRVNSQPGPQKRCLFVCRHGERMDVVFGKYWLSQCFDAKGRYIRTNLNMPHSLPQRSG 430
Query: 405 GIKDFENDPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKK 464
G +D+E D P++ G Q+R+ G+ALL+S I V+ SP+LRCVQTA IL+ L+ E
Sbjct: 431 GFRDYEKDAPITVFGCMQARLVGEALLESNTIIDHVYCSPSLRCVQTAHNILKGLQQENH 490
Query: 465 IKIRVEPGIFEWTKWEAGKTTPTLMSLEELKEANFNIDTDYRPAFPLSALMPAESYQEYM 524
+KIRVEPG+FEWTKW AG T P + EL AN ++DT YRP P+S L+ +ESY Y+
Sbjct: 491 LKIRVEPGLFEWTKWVAGSTLPAWIPPSELAAANLSVDTTYRPHIPISKLVVSESYDTYI 550
Query: 525 DRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLGM 584
R +I++ C ILIV+H S+L++CT L GL P+ DF Q+VRKIP LG
Sbjct: 551 SRSFQVTKEIISECKSKGNNILIVAHASSLEACTCQLQGLSPQNSKDFVQMVRKIPYLGF 610
Query: 585 CFCEENKEEGKWELVNPPVKTLTHGANAAFNWR 617
C CEE E G W+L +PP+ LTHG FNWR
Sbjct: 611 CSCEELGETGIWQLTDPPILPLTHGPTGGFNWR 643
>gi|169215201 PREDICTED: similar to Ubiquitin associated and SH3
domain containing, A [Homo sapiens]
Length = 122
Score = 247 bits (630), Expect = 3e-65
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH
Sbjct: 1 MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDH 60
Query: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFT 118
CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFT
Sbjct: 61 CNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFT 118
>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
sapiens]
Length = 671
Score = 54.7 bits (130), Expect = 3e-07
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 238 VHYQTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENY 297
+H+ RA++QY+PQN DEL L GD + V + +GW +G+S+RT G P NY
Sbjct: 612 IHWTPYRAMYQYRPQNEDELELREGDRVDV----MQQCDDGWFVGVSRRTQKFGTFPGNY 667
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 244 RALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTD 299
R F ++ Q+ ELTL GD +++ E + W+ G + G G P NY +
Sbjct: 386 RLKFDFQAQSPKELTLQKGDIVYI----HKEVDKNWLEG--EHHGRLGIFPANYVE 435
>gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo
sapiens]
Length = 329
Score = 54.7 bits (130), Expect = 3e-07
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 238 VHYQTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENY 297
+H+ RA++QY+PQN DEL L GD + V + +GW +G+S+RT G P NY
Sbjct: 270 IHWTPYRAMYQYRPQNEDELELREGDRVDV----MQQCDDGWFVGVSRRTQKFGTFPGNY 325
Score = 32.0 bits (71), Expect = 1.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 244 RALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTD 299
R F ++ Q+ ELTL GD +++ E + W+ G + G G P NY +
Sbjct: 44 RLKFDFQAQSPKELTLQKGDIVYI----HKEVDKNWLEG--EHHGRLGIFPANYVE 93
>gi|21361517 UBX domain protein 1 [Homo sapiens]
Length = 312
Score = 49.3 bits (116), Expect = 1e-05
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 25 LEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDHCNDPSLDDPI 70
LE L+ MGFP A KALA TG + E A+ WL +H +DP +D+P+
Sbjct: 7 LESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPL 52
>gi|5453758 nebulette sarcomeric isoform [Homo sapiens]
Length = 1014
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIF-VDPTQQDEASEGWVIGISQRTGCRGFLPENYTD 299
+T RA++ Y Q+ DE++ GDYI V P +GW+ G QRTG G LP NY +
Sbjct: 957 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPID-----DGWMYGTVQRTGRTGMLPANYIE 1011
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 48.1 bits (113), Expect = 2e-05
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIF-VDPTQQDEASEGWVIGISQRTGCRGFLPENYTD 299
+T RA++ Y Q+ DE++ GDYI V P +GW+ G QRTG G LP NY +
Sbjct: 213 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQPID-----DGWMYGTVQRTGRTGMLPANYIE 267
>gi|21536417 bridging integrator 1 isoform 10 [Homo sapiens]
Length = 409
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 341 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 400
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 401 PENFTER 407
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 371 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 430
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 431 PENFTER 437
>gi|21536413 bridging integrator 1 isoform 7 [Homo sapiens]
Length = 475
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 407 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 466
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 467 PENFTER 473
>gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens]
Length = 482
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 414 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 473
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 474 PENFTER 480
>gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens]
Length = 518
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 450 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 509
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 510 PENFTER 516
>gi|21536407 bridging integrator 1 isoform 4 [Homo sapiens]
Length = 497
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 429 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 488
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 489 PENFTER 495
>gi|21536404 bridging integrator 1 isoform 3 [Homo sapiens]
Length = 506
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 438 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 497
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 498 PENFTER 504
>gi|21536402 bridging integrator 1 isoform 2 [Homo sapiens]
Length = 550
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 482 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 541
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 542 PENFTER 548
>gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens]
Length = 593
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 525 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 584
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 585 PENFTER 591
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 46.2 bits (108), Expect = 9e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 243 LRALFQYKPQNVDELTLSPGDYIFVDPTQQ-DEASEGWVIGISQR--------TGCRGFL 293
++A Y + DEL L GD + V P Q +E EGW++G+ + CRG
Sbjct: 386 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 445
Query: 294 PENYTDR 300
PEN+T+R
Sbjct: 446 PENFTER 452
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 436 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 491
>gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo
sapiens]
Length = 1004
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 948 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1003
>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
sapiens]
Length = 824
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 768 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 823
>gi|224586849 sorbin and SH3 domain containing 2 isoform 5 [Homo
sapiens]
Length = 661
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 605 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 660
>gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo
sapiens]
Length = 731
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 675 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 730
>gi|224586844 sorbin and SH3 domain containing 2 isoform 3 [Homo
sapiens]
Length = 644
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 588 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 643
>gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo
sapiens]
Length = 1100
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 1044 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 1099
>gi|194733749 sorbin and SH3 domain containing 2 isoform 1 [Homo
sapiens]
Length = 666
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 241 QTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDR 300
+ +AL+ Y P+N DEL L D I V ++ +GW +G S+RT G P NY R
Sbjct: 610 EPFQALYNYTPRNEDELELRESDVIDV----MEKCDDGWFVGTSRRTKFFGTFPGNYVKR 665
>gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo
sapiens]
Length = 740
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 244 RALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENY 297
+AL+ Y PQN DEL L GD + V ++ +GW +G S+RT G P NY
Sbjct: 685 QALYSYIPQNDDELELRDGDIVDV----MEKCDDGWFVGTSRRTKQFGTFPGNY 734
>gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo
sapiens]
Length = 781
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 244 RALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENY 297
+AL+ Y PQN DEL L GD + V ++ +GW +G S+RT G P NY
Sbjct: 726 QALYSYIPQNDDELELRDGDIVDV----MEKCDDGWFVGTSRRTKQFGTFPGNY 775
>gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo
sapiens]
Length = 905
Score = 45.1 bits (105), Expect = 2e-04
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 244 RALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENY 297
+AL+ Y PQN DEL L GD + V ++ +GW +G S+RT G P NY
Sbjct: 850 QALYSYIPQNDDELELRDGDIVDV----MEKCDDGWFVGTSRRTKQFGTFPGNY 899
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,443,654
Number of Sequences: 37866
Number of extensions: 1153219
Number of successful extensions: 2665
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 2533
Number of HSP's gapped (non-prelim): 176
length of query: 623
length of database: 18,247,518
effective HSP length: 108
effective length of query: 515
effective length of database: 14,157,990
effective search space: 7291364850
effective search space used: 7291364850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.