SMN2 3103

Name: SMN2	Sequence: fasta or formatted (262aa)		NCBI GI: 13259529
Description: survival of motor neuron 2, centromeric isoform b		Referenced in: Capping and Splicing
Other entries for this name: alt prot [294aa] survival of motor neuron 2, centromeric isoform d alt prot [282aa] survival of motor neuron 2, centromeric isoform a alt prot [250aa] survival of motor neuron 2, centromeric isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 17 2 C cysteine 2.7 7 1 D aspartate 6.9 18 2 E glutamate 5.7 15 2 F phenylalanine 1.9 5 1 G glycine 8.4 22 3 H histidine 1.1 3 1 I isoleucine 5.3 14 2 K lysine 8.0 21 2 L leucine 5.0 13 2 M methionine 2.3 6 1 N asparagine 6.1 16 2 P proline 8.8 23 5 Q glutamine 4.2 11 2 R arginine 3.4 9 2 S serine 11.1 29 2 T threonine 4.2 11 2 V valine 3.4 9 3 W tryptophan 1.9 5 1 Y tyrosine 3.1 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 survival of motor neuron 2, centromeric isoform b [H... SMN1 1.000 survival of motor neuron 1, telomeric isoform b [Hom... SMN2 0.970 survival of motor neuron 2, centromeric isoform d [H... SMN1 0.970 survival of motor neuron 1, telomeric isoform d [Homo... SMN2 0.935 survival of motor neuron 2, centromeric isoform c [H... SMN2 0.903 survival of motor neuron 2, centromeric isoform a [H... SMNDC1 0.067 survival motor neuron domain containing 1 TDRD3 0.036 tudor domain containing 3 isoform 2 TDRD3 0.036 tudor domain containing 3 isoform 1 TDRD3 0.036 tudor domain containing 3 isoform 2 CHD3 0.034 chromodomain helicase DNA binding protein 3 isoform... RXRB 0.034 retinoid X receptor, beta PXK 0.030 PX domain containing serine/threonine kinase FMNL1 0.030 formin-like 1 DIAPH1 0.029 diaphanous 1 isoform 2 DIAPH1 0.029 diaphanous 1 isoform 1 DIAPH2 0.029 diaphanous 2 isoform 12C DIAPH2 0.029 diaphanous 2 isoform 156 KCNC3 0.027 Shaw-related voltage-gated potassium channel protein... MLL4 0.025 myeloid/lymphoid or mixed-lineage leukemia 4 EVL 0.025 Enah/Vasp-like DAAM1 0.025 dishevelled-associated activator of morphogenesis 1 ... DIAPH3 0.025 diaphanous homolog 3 isoform b DIAPH3 0.025 diaphanous homolog 3 isoform a DHX37 0.025 DEAH (Asp-Glu-Ala-His) box polypeptide 37 FMN2 0.023 formin 2 SH3BP2 0.021 SH3-domain binding protein 2 isoform b SH3BP2 0.021 SH3-domain binding protein 2 isoform c LOC646862 0.021 PREDICTED: hypothetical protein LOC646862 LOC646862 0.021 PREDICTED: hypothetical protein LOC646862 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.