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Search of human proteins with 4758568
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758568 heat shock transcription factor 2 isoform a [Homo
sapiens]
(536 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758568 heat shock transcription factor 2 isoform a [Homo sap... 1052 0.0
gi|207113147 heat shock transcription factor 2 isoform b [Homo s... 1004 0.0
gi|5031767 heat shock transcription factor 1 [Homo sapiens] 295 7e-80
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 193 4e-49
gi|100913211 heat shock transcription factor 4 isoform a [Homo s... 193 4e-49
gi|122937277 heat shock transcription factor family member 5 [Ho... 67 4e-11
gi|50312655 heat shock transcription factor, Y-linked 1 isoform ... 59 9e-09
gi|32526913 heat shock transcription factor, Y linked 2 isoform ... 59 9e-09
gi|239752444 PREDICTED: similar to heat shock transcription fact... 59 1e-08
gi|239746964 PREDICTED: similar to heat shock transcription fact... 59 1e-08
gi|169216697 PREDICTED: heat shock transcription factor family, ... 51 2e-06
gi|24211017 heat shock transcription factor, Y-linked 1 isoform ... 51 2e-06
gi|7706603 heat shock transcription factor family, X linked 1 [H... 51 2e-06
gi|50312659 heat shock transcription factor, Y linked 2 isoform ... 51 2e-06
gi|42734430 polymerase I and transcript release factor [Homo sap... 42 0.001
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 42 0.001
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 42 0.001
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 42 0.002
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 41 0.003
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 41 0.003
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 40 0.004
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 40 0.007
gi|41393608 reticulon 3 isoform b [Homo sapiens] 39 0.009
gi|239747446 PREDICTED: similar to Neuroblastoma breakpoint fami... 39 0.009
gi|16445033 ACRC protein [Homo sapiens] 39 0.016
gi|239741304 PREDICTED: similar to Neuroblastoma breakpoint fami... 38 0.020
gi|239741281 PREDICTED: Neuroblastoma breakpoint family member 6... 38 0.020
gi|112734867 retinitis pigmentosa GTPase regulator interacting p... 38 0.020
gi|87299628 biorientation of chromosomes in cell division 1-like... 38 0.027
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 38 0.027
>gi|4758568 heat shock transcription factor 2 isoform a [Homo
sapiens]
Length = 536
Score = 1052 bits (2720), Expect = 0.0
Identities = 536/536 (100%), Positives = 536/536 (100%)
Query: 1 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS 60
MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
Sbjct: 1 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS 60
Query: 61 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK 120
FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
Sbjct: 61 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK 120
Query: 121 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ 180
IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
Sbjct: 121 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ 180
Query: 181 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE 240
FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
Sbjct: 181 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE 240
Query: 241 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ 300
RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
Sbjct: 241 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ 300
Query: 301 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL 360
SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
Sbjct: 301 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL 360
Query: 361 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK 420
LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK
Sbjct: 361 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK 420
Query: 421 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP 480
NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
Sbjct: 421 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP 480
Query: 481 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS 536
IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
Sbjct: 481 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS 536
>gi|207113147 heat shock transcription factor 2 isoform b [Homo
sapiens]
Length = 518
Score = 1004 bits (2597), Expect = 0.0
Identities = 518/536 (96%), Positives = 518/536 (96%), Gaps = 18/536 (3%)
Query: 1 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS 60
MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS
Sbjct: 1 MKQSSNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMAS 60
Query: 61 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK 120
FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK
Sbjct: 61 FVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENK 120
Query: 121 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ 180
IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ
Sbjct: 121 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ 180
Query: 181 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE 240
FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE
Sbjct: 181 FIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRE 240
Query: 241 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ 300
RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ
Sbjct: 241 RISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQ 300
Query: 301 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL 360
SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL
Sbjct: 301 SGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVEL 360
Query: 361 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQMNPTDYINNTKSENKGLETTK 420
LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVD SENKGLETTK
Sbjct: 361 LDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVD------------------SENKGLETTK 402
Query: 421 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP 480
NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP
Sbjct: 403 NNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKP 462
Query: 481 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS 536
IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS
Sbjct: 463 IEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEATLFYLCELAPAPLDSDMPLLDS 518
>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
Length = 529
Score = 295 bits (755), Expect = 7e-80
Identities = 188/478 (39%), Positives = 269/478 (56%), Gaps = 35/478 (7%)
Query: 5 SNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQ 64
SNVPAFL+KLWTLV + T+ I WS +G SF V D+ +FAKE+LPKYFKHNNMASFVRQ
Sbjct: 13 SNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQ 72
Query: 65 LNMYGFRKVVHID-SGIVKQERDGPVEFQHPYFKQGQDDLLENIKRK---VSSSKPEENK 120
LNMYGFRKVVHI+ G+VK ERD EFQHP F +GQ+ LLENIKRK VS+ K E+ K
Sbjct: 73 LNMYGFRKVVHIEQGGLVKPERD-DTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIK 131
Query: 121 IRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQ 180
IRQ+ +TK+++ Q ++ KQE ++S+L +K ENE+LW+EV+ LR KHAQQQ+V+ K++Q
Sbjct: 132 IRQDSVTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQ 191
Query: 181 FIVTLVQNNQLVSLKRKRPLLLNTNG---AQKKNLFQHIVKEPTDNHHHKVP---HSRTE 234
F+++LVQ+N+++ +KRK PL+LN +G + K Q ++ + + P +S +
Sbjct: 192 FLISLVQSNRILGVKRKIPLMLNDSGSAHSMPKYSRQFSLEHVHGSGPYSAPSPAYSSSS 251
Query: 235 GLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDE 294
P S II D+T E P P + D S P + + E+
Sbjct: 252 LYAPDAVASSGPIISDIT------ELAPASPMASPGGSIDERPLSSSPLVRVKEEPPSPP 305
Query: 295 YAPVIQSGEQNEPARES--------LSSGSDGSSPLMSSAVQLNGSSSLT-------SED 339
+P ++ P+ + S S P +S L + T S
Sbjct: 306 QSPRVEEASPGRPSSVDTLLSPTALIDSILRESEPAPASVTALTDARGHTDTEGRPPSPP 365
Query: 340 PVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQAMLSGRQFSIDPDLLVDLFTSSVQ 399
P + + L ++ L K EL D+LD++D +L++ Q MLS FS+D L+DLF+ SV
Sbjct: 366 PTSTPEKCL--SVACLDKNELSDHLDAMDSNLDNLQTMLSSHGFSVDTSALLDLFSPSVT 423
Query: 400 MNPTDYINNTKSENKGLETTKNNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGN 457
+ P + + S ++ + P E S KQL+ YTA PL G+
Sbjct: 424 V-PDMSLPDLDSSLASIQELLSPQEPPRPPEAENSSPDSGKQLVHYTAQPLFLLDPGS 480
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 193 bits (490), Expect = 4e-49
Identities = 102/201 (50%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 5 SNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQ 64
S VPAFL KLW LV + T+ I WS +G SFLV D+ RFAKE+LP+YFKH+NMASFVRQ
Sbjct: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQ 74
Query: 65 LNMYGFRKVVHID-SGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQ 123
LNMYGFRKVV I+ G+++ ERD VEFQHP F +G++ LLE ++RKV + + ++ + R
Sbjct: 75 LNMYGFRKVVSIEQGGLLRPERD-HVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRP 133
Query: 124 EDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIV 183
EDL +++ Q ++ QE+ E+RL EL+ +NE LW+EV LR H QQ +VI K++Q +
Sbjct: 134 EDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLF 193
Query: 184 TLVQ-NNQLVSLKRKRPLLLN 203
+Q KRK L+L+
Sbjct: 194 GPLQAGPSNAGGKRKLSLMLD 214
>gi|100913211 heat shock transcription factor 4 isoform a [Homo
sapiens]
Length = 462
Score = 193 bits (490), Expect = 4e-49
Identities = 102/201 (50%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 5 SNVPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQ 64
S VPAFL KLW LV + T+ I WS +G SFLV D+ RFAKE+LP+YFKH+NMASFVRQ
Sbjct: 15 SPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQ 74
Query: 65 LNMYGFRKVVHID-SGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQ 123
LNMYGFRKVV I+ G+++ ERD VEFQHP F +G++ LLE ++RKV + + ++ + R
Sbjct: 75 LNMYGFRKVVSIEQGGLLRPERD-HVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRP 133
Query: 124 EDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIV 183
EDL +++ Q ++ QE+ E+RL EL+ +NE LW+EV LR H QQ +VI K++Q +
Sbjct: 134 EDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLF 193
Query: 184 TLVQ-NNQLVSLKRKRPLLLN 203
+Q KRK L+L+
Sbjct: 194 GPLQAGPSNAGGKRKLSLMLD 214
>gi|122937277 heat shock transcription factor family member 5 [Homo
sapiens]
Length = 596
Score = 67.0 bits (162), Expect = 4e-11
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 20/124 (16%)
Query: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEIL-----------------PKY 52
F +KLW LV I W G+ L+ D+ F E+L P+
Sbjct: 14 FPAKLWRLVNSPRYRS-IRWDGRGEGLLI-DQPLFEAELLSPPGPGGGGGTAGAGAEPEL 71
Query: 53 FKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPV-EFQHPYFKQGQDDLLENIKRKV 111
FK + SF+RQLN+YGFRKVV G K +GP+ F +P+F++ Q LL ++KR
Sbjct: 72 FKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQPQLLVHLKRLT 131
Query: 112 SSSK 115
S++K
Sbjct: 132 SANK 135
>gi|50312655 heat shock transcription factor, Y-linked 1 isoform 1
[Homo sapiens]
Length = 401
Score = 59.3 bits (142), Expect = 9e-09
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 65 LNMYGFRKVVH------IDSGIVKQERDGPV-----EFQHPYFKQGQDDLLENIKRK--V 111
LN+YGF K+ + + +E++ V + +P FK+G LL +KR+ V
Sbjct: 138 LNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRIGV 197
Query: 112 SSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQ 171
++ P ++ K + ++ + + SE ESL+ L ++
Sbjct: 198 KNASPISTLFNEDFNKKHFRAGANMENHNSALAAEASE-----ESLFSASKNLNMPLTRE 252
Query: 172 QQVIRKIV 179
V R+I+
Sbjct: 253 SSV-RQII 259
>gi|32526913 heat shock transcription factor, Y linked 2 isoform 1
[Homo sapiens]
Length = 401
Score = 59.3 bits (142), Expect = 9e-09
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 65 LNMYGFRKVVH------IDSGIVKQERDGPV-----EFQHPYFKQGQDDLLENIKRK--V 111
LN+YGF K+ + + +E++ V + +P FK+G LL +KR+ V
Sbjct: 138 LNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRIGV 197
Query: 112 SSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQ 171
++ P ++ K + ++ + + SE ESL+ L ++
Sbjct: 198 KNASPISTLFNEDFNKKHFRAGANMENHNSALAAEASE-----ESLFSASKNLNMPLTRE 252
Query: 172 QQVIRKIV 179
V R+I+
Sbjct: 253 SSV-RQII 259
>gi|239752444 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 354
Score = 58.5 bits (140), Expect = 1e-08
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 9 AFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPK-----YFKHNNMASFVR 63
+F KLWT+VEE T + ++W+ +G + +++D+ F +E+L + FK +++ SF+R
Sbjct: 82 SFPRKLWTIVEED-TFKSVSWNDDGDA-VIIDKDLFQREVLQRKGAERIFKTDSLTSFIR 139
Query: 64 QLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRK 110
QLN+YGF K +S K+ + + + F++ + LLENI+RK
Sbjct: 140 QLNLYGFCKTRPSNSPGNKK----MMIYCNSNFQRDKPRLLENIQRK 182
>gi|239746964 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 333
Score = 58.5 bits (140), Expect = 1e-08
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 9 AFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPK-----YFKHNNMASFVR 63
+F KLWT+VEE T + ++W+ +G + +++D+ F +E+L + FK +++ SF+R
Sbjct: 82 SFPRKLWTIVEED-TFKSVSWNDDGDA-VIIDKDLFQREVLQRKGAERIFKTDSLTSFIR 139
Query: 64 QLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRK 110
QLN+YGF K +S K+ + + + F++ + LLENI+RK
Sbjct: 140 QLNLYGFCKTRPSNSPGNKK----MMIYCNSNFQRDKPRLLENIQRK 182
>gi|169216697 PREDICTED: heat shock transcription factor family, X
linked 2 [Homo sapiens]
Length = 423
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Query: 10 FLSKLWTLVEETHTNEF--ITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFV 62
F KLW LV +N+F I W +G + V++++ F KEIL K F ++ SF
Sbjct: 99 FPQKLWRLVS---SNQFSSIWWDDSG-ACRVINQKLFEKEILKRDVAHKVFATTSIKSFF 154
Query: 63 RQLNMYGFRK--------VVHIDSGIVKQERDGPVEFQ-HPYFKQGQDDLLENIKRKV 111
RQLN+YGFRK I S +EF HPYF++ LL +KR+V
Sbjct: 155 RQLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRV 212
>gi|24211017 heat shock transcription factor, Y-linked 1 isoform 2
[Homo sapiens]
Length = 203
Score = 51.2 bits (121), Expect = 2e-06
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 65 LNMYGFRKV 73
LN+YGF K+
Sbjct: 138 LNLYGFSKI 146
>gi|7706603 heat shock transcription factor family, X linked 1 [Homo
sapiens]
Length = 423
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Query: 10 FLSKLWTLVEETHTNEF--ITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFV 62
F KLW LV +N+F I W +G + V++++ F KEIL K F ++ SF
Sbjct: 99 FPQKLWRLVS---SNQFSSIWWDDSG-ACRVINQKLFEKEILKRDVAHKVFATTSIKSFF 154
Query: 63 RQLNMYGFRK--------VVHIDSGIVKQERDGPVEFQ-HPYFKQGQDDLLENIKRKV 111
RQLN+YGFRK I S +EF HPYF++ LL +KR+V
Sbjct: 155 RQLNLYGFRKRRQCTFRTFTRIFSAKRLVSILNKLEFYCHPYFQRDSPHLLVRMKRRV 212
>gi|50312659 heat shock transcription factor, Y linked 2 isoform 2
[Homo sapiens]
Length = 203
Score = 51.2 bits (121), Expect = 2e-06
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
Query: 65 LNMYGFRKV 73
LN+YGF K+
Sbjct: 138 LNLYGFSKI 146
>gi|42734430 polymerase I and transcript release factor [Homo
sapiens]
Length = 390
Score = 42.4 bits (98), Expect = 0.001
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 126 LTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTL 185
L KII + ++Q+ Q +E R +E++ +S+ E+S+L HA + K+++ + +
Sbjct: 58 LDKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVSKLLEKVRKV 117
Query: 186 VQNNQLV--SLKRKRPLL--LNTNGAQ-------KKNLFQHIVKEPTD-------NHHHK 227
N + V SL+R+ + L N A+ K ++Q VK P
Sbjct: 118 SVNVKTVRGSLERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKLPAKLSISKSLKESEA 177
Query: 228 VPHSRTEGLKPRERISDDIIIYDVTDDNADE 258
+P E L ER +D +++ D A E
Sbjct: 178 LPEKEGEELGEGERPEEDAAALELSSDEAVE 208
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 74 VHIDSGIVKQERDG-PVEFQHPY--------FKQGQDDLLENIKRKVS--SSKPEENKIR 122
V++D+ ++K++ +E ++ Y K+ D +++++ RK+ + K E K+
Sbjct: 709 VYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLE 768
Query: 123 QE-------DLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVI 175
E L+K +S + V + E E + LKS L K++SEL+ K + Q+ I
Sbjct: 769 MEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKI 828
Query: 176 RKIVQFIVTL--VQNNQLVSLKRKRPLLLNTNGAQKK 210
+ L + +NQ V +K + + N K
Sbjct: 829 HALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAK 865
Score = 30.0 bits (66), Expect = 5.5
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 115 KPEENKIRQEDLTKIISSAQKVQIKQETIESR----LSELKSENESLWKEVSELRAKHAQ 170
K EE++ + E+++K+ S Q + + +E+R LS+ K+ L ++S L K A
Sbjct: 1177 KEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLAN 1236
Query: 171 QQQVIRKIVQFIVTLVQNNQLVSLKRKRPLL 201
+ ++ + + L + +S K ++ LL
Sbjct: 1237 LNRKYEEVCEEV--LHAKKKEISAKDEKELL 1265
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 74 VHIDSGIVKQERDG-PVEFQHPY--------FKQGQDDLLENIKRKVS--SSKPEENKIR 122
V++D+ ++K++ +E ++ Y K+ D +++++ RK+ + K E K+
Sbjct: 722 VYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLDVTQKYTEKKLE 781
Query: 123 QE-------DLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVI 175
E L+K +S + V + E E + LKS L K++SEL+ K + Q+ I
Sbjct: 782 MEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEKI 841
Query: 176 RKIVQFIVTL--VQNNQLVSLKRKRPLLLNTNGAQKK 210
+ L + +NQ V +K + + N K
Sbjct: 842 HALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAK 878
Score = 30.0 bits (66), Expect = 5.5
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 115 KPEENKIRQEDLTKIISSAQKVQIKQETIESR----LSELKSENESLWKEVSELRAKHAQ 170
K EE++ + E+++K+ S Q + + +E+R LS+ K+ L ++S L K A
Sbjct: 1190 KEEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLAN 1249
Query: 171 QQQVIRKIVQFIVTLVQNNQLVSLKRKRPLL 201
+ ++ + + L + +S K ++ LL
Sbjct: 1250 LNRKYEEVCEEV--LHAKKKEISAKDEKELL 1278
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 41.6 bits (96), Expect = 0.002
Identities = 88/442 (19%), Positives = 179/442 (40%), Gaps = 51/442 (11%)
Query: 100 QDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQE----TIESRLSELKSENE 155
Q D L+ +K+K+ K E K+ +DL+ + S K + E T+E +LSE + +NE
Sbjct: 1207 QIDNLQRVKQKLEKEK-SEFKLEIDDLSSSMESVSKSKANLEKICRTLEDQLSEARGKNE 1265
Query: 156 SLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVS-LKRKRPLLLNTNGAQKKNLFQ 214
+ + +SEL + ++ Q ++ + L + +VS L R + K+ L +
Sbjct: 1266 EIQRSLSELTTQKSRLQTEAGELSR---QLEEKESIVSQLSRSKQAFTQQTEELKRQLEE 1322
Query: 215 HIVKEPTDNHHHKVPHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISD 274
+ + H + SR + RE+ + + E + + N +V
Sbjct: 1323 E--NKAKNALAHALQSSRHDCDLLREQYEE--------EQEGKAELQRALSKANSEVAQ- 1371
Query: 275 PSNCSQYPDIVIVEDDNEDEYAPVIQSGEQNEPARESLSSGSDGSSPLMSSAVQLNGSSS 334
D + ++ E+ + Q + +E E++++ S +Q
Sbjct: 1372 -WRTKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVNA-KCASLEKTKQRLQGEVEDL 1429
Query: 335 LTSEDPVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQAML-SGRQFSIDPDLLVDL 393
+ + + + L+ KV L ++ + S + +A L R S + L +
Sbjct: 1430 MVDVERANSLAAALDKKQRNFDKV-LAEWKTKCEESQAELEASLKESRSLSTELFKLKNA 1488
Query: 394 FTSSVQMNPTDYINNTKSENKGLETTKNNVVQPVSEEGR--KSKSKPDKQLIQYTAFPLL 451
+ ++ D + K ENK LE ++ + ++E G+ K KQ+ A L
Sbjct: 1489 YEEAL-----DQLETVKRENKNLEQEIADLTEQIAENGKTIHELEKSRKQIELEKADIQL 1543
Query: 452 AFLDGNPASSVEQAS----TTASSEVLSSVDKPI-----EVDEL----------LDSSLD 492
A + A E+A ++V S +D+ I E+++L + S+LD
Sbjct: 1544 ALEEAEAALEHEEAKILRIQLELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALD 1603
Query: 493 PE-PTQSKLVRLEPLTEAEASE 513
E ++++ +RL+ E + +E
Sbjct: 1604 AEVRSRNEAIRLKKKMEGDLNE 1625
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 40.8 bits (94), Expect = 0.003
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 17 LVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHI 76
L+ E N T ++N Q+ ++ EQ AK +A+ Q++ + H
Sbjct: 611 LMMEKRNNSLQTATENTQARVLHAEQEKAKVT-------EELAAATAQVSHLQLKMTAH- 662
Query: 77 DSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQ-- 134
Q+++ ++ Q + + DLL KV + E + ++ +K S Q
Sbjct: 663 ------QKKETELQMQLTESLK-ETDLLRGQLTKVQAKLSELQETSEQAQSKFKSEKQNR 715
Query: 135 -KVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQN--NQL 191
++++K ++E L++L+ E ESL K +SE + K AQ++ + + I Q ++L
Sbjct: 716 KQLELKVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQAEEEIDEIRKSYQEELDKL 775
Query: 192 VSLKRKRPLLLNTNGAQKKNLFQ 214
L +K + + A++ +L Q
Sbjct: 776 RQLLKKTRVSTDQAAAEQLSLVQ 798
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 103 LLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQI-KQETIESRLSELKSENESLWKEV 161
+LE ++R +S ++ ++ + Q + +I S K I KQE++E RLS+L+SEN L +++
Sbjct: 999 ILERVQRDLSQTQCQKKETEQ--MYQIEQSKLKKYIAKQESVEERLSQLQSENMLLRQQL 1056
Query: 162 SELRAKHAQQQQVIRKIVQFIVTLVQN------NQLVSLKRKRPLLLNTNGAQKKNLFQ 214
+ K Q++ I + +N Q++SL+ K L++ K+ + Q
Sbjct: 1057 DDAHKKANSQEKTSSTIQDQFHSAAKNLQAESEKQILSLQEKNKELMDEYNHLKERMDQ 1115
Score = 30.0 bits (66), Expect = 5.5
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 26/127 (20%)
Query: 101 DDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENES---- 156
D L +K+ + +N++ + TK+ QK++ ++E + RL+ LK ENE
Sbjct: 657 DQLTVKLKQMENMVSVLQNELSETKKTKLQLELQKIEWEKELYDLRLA-LKQENEEKRNA 715
Query: 157 ---LWKEVSELRAKHAQ-------QQQV---IRKIVQFIVTLVQNNQLVSLKRKRPLLLN 203
K+ +LR K + +QQ+ +R++V+ + T+ N LV +R
Sbjct: 716 DMLYNKDSEQLRIKEEECGKVVETKQQLKWNLRRLVKELRTVRNNLDLVVQER------- 768
Query: 204 TNGAQKK 210
N AQK+
Sbjct: 769 -NDAQKQ 774
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 40.4 bits (93), Expect = 0.004
Identities = 82/410 (20%), Positives = 164/410 (40%), Gaps = 83/410 (20%)
Query: 89 VEFQHPYFKQGQDDL-LENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRL 147
+EF H + L LE +++ +S ++ + ++ Q+ + + K KQE++E RL
Sbjct: 1078 IEFHHTRDALREKTLGLERVQKDLSQTQCQMKEMEQKYQNEQVK-VNKYIGKQESVEERL 1136
Query: 148 SELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGA 207
S+L+SEN L +++ + K +++ + I +VQ Q S K+ LLL
Sbjct: 1137 SQLQSENMLLRQQLDDAHNKADNKEKTVINIQDQFHAIVQKLQAES--EKQSLLLEERNK 1194
Query: 208 QKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPET 267
+ + H+ KE + + E+ ++++ + + AD + E
Sbjct: 1195 ELISECNHL-KERQYQYEN-------------EKAEREVVVRQLQQELADTLKKQSMSEA 1240
Query: 268 NEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQSGEQNEPARESLSSGSDGSSPLMSSAV 327
+ +V S+Y + +ED+ +D + Q Q + A++ + + +
Sbjct: 1241 SLEV------TSRYR--INLEDETQDLKKKLGQIRNQLQEAQDRHTEAVRCAEKMQDHKQ 1292
Query: 328 QLNGSSSLTSEDPVTMMDSILNDNINLLGK----------VELLDYLDSIDCSLED---- 373
+L ++ MD I NLL +L++ S++C+L+
Sbjct: 1293 KLEKDNAKLKVTVKKQMDKIEELQKNLLNANLSEDEKEQLKKLMELKQSLECNLDQEMKK 1352
Query: 374 ----------FQAML----------SGRQFSIDPDLLVDLFTSSVQMNPTDY-INNTKSE 412
F+ +L +FS DL F +Q+N + I++ +E
Sbjct: 1353 NVELEREITGFKNLLKMTRKKLNEYENGEFSFHGDLKTSQFEMDIQINKLKHKIDDLTAE 1412
Query: 413 NKGLET---------TKNNV----------VQPVSEEGRKSKSKPDKQLI 443
LET TKN + VQ E+ +K+K K ++++I
Sbjct: 1413 ---LETAGSKCLHLDTKNQILQEELLSMKTVQKKCEKLQKNKKKLEQEVI 1459
Score = 29.6 bits (65), Expect = 7.2
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 97 KQGQDDLLENIKRKVSSSKPEENKIRQE--DLTKIISSAQKVQI-----------KQETI 143
KQ + L+ ++ ++ + K N++ QE D + +S Q ++ KQ+ I
Sbjct: 830 KQQLELSLQTLEMELRTVKSNLNQVVQERNDAQRQLSREQNARMLQDGILTNHLSKQKEI 889
Query: 144 ESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQ 190
E ++ SEN +E +L K++ Q+ I + I T+ NQ
Sbjct: 890 EMAQKKMNSENSHSHEEEKDLSHKNSMLQEEIAMLRLEIDTIKNQNQ 936
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 39.7 bits (91), Expect = 0.007
Identities = 77/349 (22%), Positives = 134/349 (38%), Gaps = 33/349 (9%)
Query: 208 QKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRER----ISDDIII---YDVTDDNADEEN 260
Q + H+ +E T R E + + R +S D II + D N+ E +
Sbjct: 902 QSQKATMHLKQEVTPRAASLRTGERAENVATQRRHSAQLSSDHIIPLMHLAKDLNSQERS 961
Query: 261 IPVIPETNEDVISDPSNC---SQYPDIVIVEDDNEDEYAPVIQSGEQNE--PARESLSSG 315
IP N + NC S + I + + EQN+ R+ +
Sbjct: 962 IPPSENQNSQESNGEGNCLSSSASSALAISSLADAATDSSCTSGAEQNDGQSIRKKRRAT 1021
Query: 316 SDGSSPLMSSAVQLNGSSSLTSEDPVTMMDSILNDNINLLGKVELLDYLDSIDCSLEDFQ 375
DGSSP + S + N + + + +D +LN + L + EL L +D +L +
Sbjct: 1022 GDGSSPELPSLERKNKRRKIKGKKERSQVDQLLNIS---LREEELSKSLQCMDNNLLQAR 1078
Query: 376 AMLSGRQFSIDPDLLV-DLFTSSVQMNPTDYINNTKSENKGLETTKNNVVQPVS--EEGR 432
A L + L++ T + T I + + E +++ P S E R
Sbjct: 1079 AALQTAYVEVQRLLMLKQQITMEMSALRTHRIQILQGLQETYEPSEHPDQVPCSLTRERR 1138
Query: 433 KSKSKP--DKQLIQYTAFPLLAFLDGNPASSVEQASTTASSEVLSSVDKPIEVDELLDSS 490
S+S+ D L+ FPL FL+ P+S V + T AS ++ +S
Sbjct: 1139 NSRSQTSIDAALLPTPFFPL--FLE-PPSSHVSPSPTGASLQITTS-------PTFQTHG 1188
Query: 491 LDPEPTQSKLVRLEPLTEAEASEATLF---YLCELAPAPLDSDMPLLDS 536
P P S ++ EP++ + C ++ L+++ + DS
Sbjct: 1189 SVPAPDSSVQIKQEPMSPEQDENVNAVPPSSACNVSKELLEANREISDS 1237
>gi|41393608 reticulon 3 isoform b [Homo sapiens]
Length = 1013
Score = 39.3 bits (90), Expect = 0.009
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 50/292 (17%)
Query: 243 SDDIIIYDVTDDNADEEN---------IP-VIPETNEDVISDPSNCSQYPDIVIVEDDNE 292
SDD +I D+T D + E N IP + +T E I + +C + E+
Sbjct: 481 SDDTVIEDITADTSFENNKIQAEKPVSIPSAVVKTGEREIKEIPSCER-------EEKTS 533
Query: 293 DEYAPVIQSGE--QNEPARESLSSGSDGS-SPLMSSAVQLNGSSSLTSEDPVTMMDSILN 349
+ ++ E Q++P S S+ + S + + V L S + E P+T + L
Sbjct: 534 KNFEELVSDSELHQDQPDILGRSPASEAACSKVPDTNVSLEDVSEVAPEKPITTENPKLP 593
Query: 350 DNI--NLLGKVELLDYLDSIDCSLEDFQAMLSGRQFS-IDPDLLVDLFTSSVQMNPTDYI 406
+ N+ + E S++ + + L G+ ID DL +
Sbjct: 594 STVSPNVFNETEF-----SLNVTTSAYLESLHGKNVKHIDDSSPEDLIAAF--------- 639
Query: 407 NNTKSENKGLETTKNNVVQPVSEEGRKSKSKPDKQLIQYTAFPLLAFLDGNPASSVEQAS 466
T++ +KG+ ++ N + +SE+ K+ P +++ D S EQ+
Sbjct: 640 --TETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYS-EQSK 696
Query: 467 TTASSE---VLSSVDKPIEVDELLDSSLDPEPTQSKLVRLEPLTEAEASEAT 515
T SE V + P+ +SLD E Q + L+ L E + ++T
Sbjct: 697 ETNGSEPLGVFPTQGTPV-------ASLDLEQEQLTIKALKELGERQVEKST 741
>gi|239747446 PREDICTED: similar to Neuroblastoma breakpoint family
member 6-like protein [Homo sapiens]
Length = 298
Score = 39.3 bits (90), Expect = 0.009
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 105 ENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSEL 164
E K + S EE + ++ +L ++ SA +++I I+++ EL L +++ E
Sbjct: 62 EECKDLIESVLEEEVQFQERELAELPRSAARLRIHDPLIQAQAEELTH----LRQKIQEG 117
Query: 165 RAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNH 224
R Q ++ V+ L++N + +R+R G+Q + + K T+NH
Sbjct: 118 RGVCYLFTQHVKNTVKSFEGLLRNTDIAYYQRQRFCEQMVQGSQLTEIL--VRKLATENH 175
Query: 225 HHKVPHSRTEGLKPRERIS 243
+ K R + L PR ++
Sbjct: 176 NGKKNEDRQKPLAPRSELA 194
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 38.5 bits (88), Expect = 0.016
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 250 DVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQSGEQNEPAR 309
D +DDN+D+ ++P + DV D S+ S PD D ++D AP S + P
Sbjct: 203 DSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPD-----DSSDDSEAPDDSSDDSEAPDD 257
Query: 310 ESLSSGSDGSSPLMSSAVQLNGSSSLTSED 339
S S + S S A + S S+D
Sbjct: 258 SSDDSEAPDDSSDDSEAPDDSSDDSEASDD 287
Score = 34.3 bits (77), Expect = 0.29
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 250 DVTDDNADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQSGEQNEPAR 309
DV DD++D+ ++P + + D S+ S+ PD D ++D AP S + P
Sbjct: 223 DVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPD-----DSSDDSEAPDDSSDDSEAPDD 277
Query: 310 ESLSSGSDGSSPLMSSAVQLNGSSSLTSEDP 340
S S + S S + + SS SE P
Sbjct: 278 SSDDSEASDDS---SDDSEASDDSSDDSEAP 305
Score = 32.7 bits (73), Expect = 0.86
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 238 PRERISDDIIIYDVTDD--NADEENIPVIPETNEDVISDPSNCS-----QYPDIVIVEDD 290
P+ + S ++I +D+ + EE + E N D S P C Q P IVI +DD
Sbjct: 69 PKRQASSVVVIDSDSDEECHTHEEKKAKLLEINSDDES-PECCHVKPAIQEPPIVISDDD 127
Query: 291 NEDEYAPVIQSGEQNEPARESLSSGSDGS 319
N+D+ ++ + N E+ SD S
Sbjct: 128 NDDDNGNDLEVPDDNSDDSEAPDDNSDDS 156
Score = 31.6 bits (70), Expect = 1.9
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 221 TDNHHHKVPHSRTEGLKPRERISDDIIIYDVTDDNADEENIPVIPETNEDVISDPSNCSQ 280
+D+ + H + +P ISDD D DDN ++ +P + + D S+ S+
Sbjct: 102 SDDESPECCHVKPAIQEPPIVISDD----DNDDDNGNDLEVPDDNSDDSEAPDDNSDDSE 157
Query: 281 YP-----DIVIVEDDNEDEYAPVIQSGEQNEPARESLSSGSDGS 319
P D +D+++D AP S + + P S S D S
Sbjct: 158 APDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNS 201
>gi|239741304 PREDICTED: similar to Neuroblastoma breakpoint family
member 6-like protein [Homo sapiens]
Length = 298
Score = 38.1 bits (87), Expect = 0.020
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 105 ENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSEL 164
E K + S EE + ++ +L ++ SA +++I I+++ EL L ++ E
Sbjct: 62 EECKDLIESVLEEEVQFQERELAELPRSAARLRIHDPLIQAQAEELTH----LRQKTQEG 117
Query: 165 RAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNH 224
R Q ++ V+ L++N + +R+R G+Q + + K T+NH
Sbjct: 118 RGVCYLFTQHVKNTVKSFEGLLRNTDIAYYQRQRFCEQMVQGSQLTEIL--VRKLATENH 175
Query: 225 HHKVPHSRTEGLKPRERIS 243
+ K R + L PR ++
Sbjct: 176 NGKKNEDRQKPLAPRSELA 194
>gi|239741281 PREDICTED: Neuroblastoma breakpoint family member
6-like protein [Homo sapiens]
Length = 322
Score = 38.1 bits (87), Expect = 0.020
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 105 ENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSEL 164
E K + S EE + ++ +L ++ SA +++I I+++ EL L ++ E
Sbjct: 62 EECKDLIESVLEEEVQFQERELAELPRSAARLRIHDPLIQAQAEELTH----LRQKTQEG 117
Query: 165 RAKHAQQQQVIRKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNLFQHIVKEPTDNH 224
R Q ++ V+ L++N + +R+R G+Q + + K T+NH
Sbjct: 118 RGVCYLFTQHVKNTVKSFEGLLRNTDIAYYQRQRFCEQMVQGSQLTEIL--VRKLATENH 175
Query: 225 HHKVPHSRTEGLKPRERIS 243
+ K R + L PR ++
Sbjct: 176 NGKKNEDRQKPLAPRSELA 194
>gi|112734867 retinitis pigmentosa GTPase regulator interacting
protein 1 [Homo sapiens]
Length = 1286
Score = 38.1 bits (87), Expect = 0.020
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 83 QERDGPVEFQHPYFKQGQDDLLEN-IKRKVSSSKPE-ENKIRQEDLTKIISSAQKVQIKQ 140
QER +E + D LLE+ + SSS+P N++ E L + +S Q Q+
Sbjct: 361 QERVEDLEKERKLLNDNYDKLLESMLDSSDSSSQPHWSNELIAEQLQQQVSQLQD-QLDA 419
Query: 141 ETIESR-----LSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLVSLK 195
E + R LS K++NE L EV+ + KH Q+ + ++Q T+ Q S
Sbjct: 420 ELEDKRKVLLELSREKAQNEDLKLEVTNILQKHKQEVE----LLQNAATISQPPDRQSEP 475
Query: 196 RKRPLLLNTNGAQKKNLFQHIVKEPTDNHHHKVPHSRTEGLKPRERISDDIIIYDVTDDN 255
P +L N + + ++ ++ +++ S E E+ D +I+ +
Sbjct: 476 ATHPAVLQENTQIEPSEPKNQEEKKLSQVLNELQVSHAETTLELEKTRDMLILQRKINVC 535
Query: 256 ADEENIPVIPETNEDVISDPSNCSQYPDIVIVEDDNEDEYAPVIQSGEQNEPARESLSSG 315
EE ++ + + D + ++ ++++ + +++S + P E L
Sbjct: 536 YQEELEAMMTKADNDNRDHKEKLERLTRLLDLKNNRIKQLEGILRS--HDLPTSEQLKDV 593
Query: 316 SDGSSPL 322
+ G+ PL
Sbjct: 594 AYGTRPL 600
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 37.7 bits (86), Expect = 0.027
Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 95 YFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSEN 154
Y+ D+L +R+ + + EE +R++ + + +K + ++ + +S
Sbjct: 480 YYSDSDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSV 539
Query: 155 ESLWKEVSELRAKHAQQQQVI--RKIVQFIVTLVQNNQLVSLKRKRPLLLNTNGAQKKNL 212
+ L K A+ ++V+ RK+++ V L S KRK+ ++KK
Sbjct: 540 DLEESSTKSLEPKAARIKEVLKERKVLEKKVAL-------SKKRKKDSRNVEENSKKKQQ 592
Query: 213 FQHIVKEPTDNHHH------------KVPHSRTEGLKPRERISDDIIIYDVTDDNADEEN 260
++ KE H K H+++E KP R+S+ + V D+N +E
Sbjct: 593 YEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSESL---HVVDENKNESK 649
Query: 261 I 261
+
Sbjct: 650 L 650
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 37.7 bits (86), Expect = 0.027
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 100 QDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQE----TIESRLSELKSENE 155
Q D L+ +K+K+ K E K+ +DL + + K + E T+E +LSELKS+ E
Sbjct: 1212 QIDNLQRVKQKLEKEK-SEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQLSELKSKEE 1270
Query: 156 SLWKEVSELRAKHAQQQ 172
+ +++L A+ + Q
Sbjct: 1271 EQQRLINDLTAQRGRLQ 1287
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,401,663
Number of Sequences: 37866
Number of extensions: 872329
Number of successful extensions: 4154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 3775
Number of HSP's gapped (non-prelim): 604
length of query: 536
length of database: 18,247,518
effective HSP length: 107
effective length of query: 429
effective length of database: 14,195,856
effective search space: 6090022224
effective search space used: 6090022224
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.