PTRF 28078

Name: PTRF	Sequence: fasta or formatted (390aa)		NCBI GI: 42734430
Description: polymerase I and transcript release factor		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 32 3 C cysteine 0.0 0 0 D aspartate 5.4 21 3 E glutamate 14.4 56 2 F phenylalanine 1.5 6 1 G glycine 5.9 23 2 H histidine 1.3 5 1 I isoleucine 3.3 13 2 K lysine 10.0 39 2 L leucine 9.7 38 2 M methionine 1.5 6 1 N asparagine 2.1 8 1 P proline 3.8 15 2 Q glutamine 3.3 13 1 R arginine 7.4 29 3 S serine 7.4 29 2 T threonine 4.9 19 2 V valine 8.5 33 2 W tryptophan 0.0 0 0 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 polymerase I and transcript release factor SDPR 0.267 serum deprivation response protein MURC 0.202 muscle-related coiled-coil protein PRKCDBP 0.109 protein kinase C, delta binding protein MYH11 0.040 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.040 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.040 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.040 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH6 0.038 myosin heavy chain 6 MYO18A 0.036 myosin 18A isoform b MYO18A 0.036 myosin 18A isoform a MYH14 0.035 myosin, heavy chain 14 isoform 1 MYH14 0.035 myosin, heavy chain 14 isoform 2 MYH14 0.035 myosin, heavy chain 14 isoform 3 HMMR 0.033 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.033 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.033 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.033 hyaluronan-mediated motility receptor isoform b [Ho... GOLGB1 0.033 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH13 0.033 myosin, heavy polypeptide 13, skeletal muscle [Homo... MYH7 0.032 myosin, heavy chain 7, cardiac muscle, beta CROCC 0.032 ciliary rootlet coiled-coil MYH4 0.032 myosin, heavy polypeptide 4, skeletal muscle BAT2D1 0.031 HBxAg transactivated protein 2 MYH10 0.029 myosin, heavy polypeptide 10, non-muscle MYH9 0.029 myosin, heavy polypeptide 9, non-muscle MYH2 0.029 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.029 myosin, heavy chain 2, skeletal muscle, adult [Homo... CNTLN 0.029 centlein isoform 1 GIGYF2 0.028 GRB10 interacting GYF protein 2 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.