Search of human proteins with 47155554

Search of human proteins with 47155554

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47155554 aminopeptidase-like 1 [Homo sapiens]
         (523 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47155554 aminopeptidase-like 1 [Homo sapiens]                     1062   0.0  
gi|41393561 leucine aminopeptidase 3 [Homo sapiens]                   138   1e-32
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo...    32   1.4  
gi|168823435 hypothetical protein LOC79747 [Homo sapiens]              31   2.4  

>gi|47155554 aminopeptidase-like 1 [Homo sapiens]
          Length = 523

 Score = 1062 bits (2747), Expect = 0.0
 Identities = 523/523 (100%), Positives = 523/523 (100%)

Query: 1   MANVGLQFQASAGDSDPQSRPLLLLGQLHHLHRVPWSHVRGKLQPRVTEELWQAALSTLN 60
           MANVGLQFQASAGDSDPQSRPLLLLGQLHHLHRVPWSHVRGKLQPRVTEELWQAALSTLN
Sbjct: 1   MANVGLQFQASAGDSDPQSRPLLLLGQLHHLHRVPWSHVRGKLQPRVTEELWQAALSTLN 60

Query: 61  PNPTDSCPLYLNYATVAALPCRVSRHNSPSAAHFITRLVRTCLPPGAHRCIVMVCEQPEV 120
           PNPTDSCPLYLNYATVAALPCRVSRHNSPSAAHFITRLVRTCLPPGAHRCIVMVCEQPEV
Sbjct: 61  PNPTDSCPLYLNYATVAALPCRVSRHNSPSAAHFITRLVRTCLPPGAHRCIVMVCEQPEV 120

Query: 121 FASACALARAFPLFTHRSGASRRLEKKTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRL 180
           FASACALARAFPLFTHRSGASRRLEKKTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRL
Sbjct: 121 FASACALARAFPLFTHRSGASRRLEKKTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRL 180

Query: 181 AARIVDTPCNEMNTDTFLEEINKVGKELGIIPTIIRDEELKTRGFGGIYGVGKAALHPPA 240
           AARIVDTPCNEMNTDTFLEEINKVGKELGIIPTIIRDEELKTRGFGGIYGVGKAALHPPA
Sbjct: 181 AARIVDTPCNEMNTDTFLEEINKVGKELGIIPTIIRDEELKTRGFGGIYGVGKAALHPPA 240

Query: 241 LAVLSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQ 300
           LAVLSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQ
Sbjct: 241 LAVLSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQ 300

Query: 301 GFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDL 360
           GFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDL
Sbjct: 301 GFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDL 360

Query: 361 GADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFS 420
           GADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFS
Sbjct: 361 GADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFS 420

Query: 421 EFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGV 480
           EFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGV
Sbjct: 421 EFTSAVADMKNSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGV 480

Query: 481 ALLLALFGRASEDPLLNLVSPLGCEVDVEEGDLGRDSKRRRLV 523
           ALLLALFGRASEDPLLNLVSPLGCEVDVEEGDLGRDSKRRRLV
Sbjct: 481 ALLLALFGRASEDPLLNLVSPLGCEVDVEEGDLGRDSKRRRLV 523


>gi|41393561 leucine aminopeptidase 3 [Homo sapiens]
          Length = 519

 Score =  138 bits (347), Expect = 1e-32
 Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 17/298 (5%)

Query: 177 GVRLAARIVDTPCNEMNTDTFLEEINKVGKELGIIPTI-IRDEE-LKTRGFGGIYGVGKA 234
           G  LA ++++TP NEM    F E I K  K       + IR +  ++ +  G    V K 
Sbjct: 195 GQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWIEEQAMGSFLSVAKG 254

Query: 235 ALHPPALAVLSH--TPDGATQTIAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAVLG 292
           +  PP    + +  +P+     + +VGKGI +D+GG+SIK    M  M+ D GGAA +  
Sbjct: 255 SDEPPVFLEIHYKGSPNANEPPLVFVGKGITFDSGGISIKASANMDLMRADMGGAATICS 314

Query: 293 AFRAAIKQGFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADG 352
           A  +A K     N+  +  L EN     A +P D+    +GKT++++NTDAEGRL+LAD 
Sbjct: 315 AIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADA 374

Query: 353 VSYACKDLGADIILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLV 412
           + YA       +IL+ ATLTGA  +A G     V TNS+       +A  + GD V  + 
Sbjct: 375 LCYA-HTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMP 433

Query: 413 YCPELHFSEFTSAVADMK----NSVADRDNSPSSCAGLFIASHIGFDWPGVWVHLDIA 466
                 F  +T  V D +    N++    ++ +  A  F+   +       W HLDIA
Sbjct: 434 L-----FEHYTRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHP---KWAHLDIA 483


>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
            sapiens]
          Length = 1242

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 6/117 (5%)

Query: 61   PNPTDSCPLYLNYATVAALPCRVSRHNSPSAAHFITRLVRTCLPPGAHRCIVMVCEQPEV 120
            P P   C L +        P     +NS  + H    LVR    PG+ R     C    +
Sbjct: 1023 PPPRPPCRLSMGRRHKLCSPDPGQANNSEGSDHDYLPLVRLQEAPGSFRLDAPFCAAVRI 1082

Query: 121  FASACALARAFPLFTHRSGASRRLEKKTVTVEFFLVGQDNGPVEVSTLQCLANATDG 177
              S   L RA P   HR+     L   + ++ + L+G   G  + +T  C  + + G
Sbjct: 1083 --SQERLCRASPFAVHRAS----LSPTSASLPWALLGPGVGQGDSATASCSPSPSSG 1133


>gi|168823435 hypothetical protein LOC79747 [Homo sapiens]
          Length = 1667

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 35  PWSHVRGKLQPRVTEELWQAALSTLNPNPTDSCPLYLNYATVAALPCRVSRHNSPSAAHF 94
           PW  +R K +  +T+E  +  +         S P +LNY        R++    P+  HF
Sbjct: 478 PWKLIRQKKETVITDEAQELIVKKPERFLEISSP-FLNY--------RMTPFTIPTEMHF 528

Query: 95  ITRLVRTCLPPGA 107
           +  L++  +PPG+
Sbjct: 529 VRSLIKKGIPPGS 541


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,335,546
Number of Sequences: 37866
Number of extensions: 982359
Number of successful extensions: 1851
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1847
Number of HSP's gapped (non-prelim): 5
length of query: 523
length of database: 18,247,518
effective HSP length: 107
effective length of query: 416
effective length of database: 14,195,856
effective search space: 5905476096
effective search space used: 5905476096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.