Search of human proteins with 46409390

Search of human proteins with 46409390

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46409390 transmembrane protein 179 [Homo sapiens]
         (197 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46409390 transmembrane protein 179 [Homo sapiens]                  402   e-113
gi|40786402 transmembrane protein 179B [Homo sapiens]                  41   8e-04
gi|23397681 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397693 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397691 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397689 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397687 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397685 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|23397683 egf-like module containing, mucin-like, hormone rece...    30   1.0  
gi|134268640 tectorin alpha precursor [Homo sapiens]                   30   1.3  
gi|222537734 hypothetical protein LOC349633 [Homo sapiens]             29   3.0  
gi|133930786 egf-like module-containing mucin-like receptor 3 [H...    27   8.6  

>gi|46409390 transmembrane protein 179 [Homo sapiens]
          Length = 197

 Score =  402 bits (1034), Expect = e-113
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MALNNFLFAQCACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQERERF 60
           MALNNFLFAQCACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQERERF
Sbjct: 1   MALNNFLFAQCACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQERERF 60

Query: 61  TVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFVVFL 120
           TVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFVVFL
Sbjct: 61  TVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFVVFL 120

Query: 121 VFIASTIVSVGFTMWCDTITEKGTVPHSCEELQDIDLELGVDNSAFYDQFAIAQVGGSGQ 180
           VFIASTIVSVGFTMWCDTITEKGTVPHSCEELQDIDLELGVDNSAFYDQFAIAQVGGSGQ
Sbjct: 121 VFIASTIVSVGFTMWCDTITEKGTVPHSCEELQDIDLELGVDNSAFYDQFAIAQVGGSGQ 180

Query: 181 EGRLAMLGGGHLLLDIC 197
           EGRLAMLGGGHLLLDIC
Sbjct: 181 EGRLAMLGGGHLLLDIC 197


>gi|40786402 transmembrane protein 179B [Homo sapiens]
          Length = 219

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 1   MALNNFLFAQCACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQERERF 60
           MAL+     + A +  AFL   V    ++     F GRC L+       ++L +      
Sbjct: 1   MALSWLQRVELALFAAAFLCGAVAAAAMTRTQGSFSGRCPLYGVATLNGSSLALSRPSA- 59

Query: 61  TVQEWGPPAACRFSLLASLLSLLLAAAHAWRTLFFLC--KGHEGSFFSAFLNLLVSAFVV 118
                  P+ C F   AS L  L         ++  C    H G+     + L +SA  V
Sbjct: 60  -------PSLCYFVAGASGLLALYCLLLLLFWIYSSCIEDSHRGAI-GLRIALAISAIAV 111

Query: 119 FLVFIASTIVSVGFTMWCDTITEKGTVPHSCEELQDI 155
           FLV +++ I+  G    C++I    T   SC E Q I
Sbjct: 112 FLVLVSACILRFGTRSLCNSIISLNTT-ISCSEAQKI 147


>gi|23397681 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform a [Homo sapiens]
          Length = 823

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 527 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 581

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 582 AHLLFLVA-IDQTGHKVLCSII 602


>gi|23397693 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform g [Homo sapiens]
          Length = 719

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 423 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 477

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 478 AHLLFLVA-IDQTGHKVLCSII 498


>gi|23397691 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform f [Homo sapiens]
          Length = 763

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 467 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 521

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 522 AHLLFLVA-IDQTGHKVLCSII 542


>gi|23397689 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform e [Homo sapiens]
          Length = 812

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 516 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 570

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 571 AHLLFLVA-IDQTGHKVLCSII 591


>gi|23397687 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform d [Homo sapiens]
          Length = 681

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 385 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 439

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 440 AHLLFLVA-IDQTGHKVLCSII 460


>gi|23397685 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform c [Homo sapiens]
          Length = 730

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 434 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 488

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 489 AHLLFLVA-IDQTGHKVLCSII 509


>gi|23397683 egf-like module containing, mucin-like, hormone
           receptor-like sequence 2 isoform b [Homo sapiens]
          Length = 774

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 60  FTVQEWGP--PAACRFSLLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFV 117
           + VQE  P         L  SLL LLLAA       F LCK  + +  S  L L +  F+
Sbjct: 478 YDVQEEDPVLTVITYMGLSVSLLCLLLAAL-----TFLLCKAIQNTSTSLHLQLSLCLFL 532

Query: 118 VFLVFIASTIVSVGFTMWCDTI 139
             L+F+ + I   G  + C  I
Sbjct: 533 AHLLFLVA-IDQTGHKVLCSII 553


>gi|134268640 tectorin alpha precursor [Homo sapiens]
          Length = 2155

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 11  CACYFLAFLFSFVVVVPLSENGHDFRGRCLLFTEGMWLSANLTVQ 55
           C C    F+ S    VPL + G DF G      E  W +AN TVQ
Sbjct: 631 CECN-QGFVLSTSQCVPLHKCGCDFDGHYYTMGEFFWATANCTVQ 674


>gi|222537734 hypothetical protein LOC349633 [Homo sapiens]
          Length = 207

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 51  NLTVQERERFTVQEWGPPAACRFSLLASLLSLLLAA----AHAWRTLFFLCKGH---EGS 103
           N+T  E + FTVQ    P      L   L +L LAA    + A++  F +       EG 
Sbjct: 122 NITEVEIQAFTVQIRALPILSTLKLREKLSTLALAAKIPQSSAFKPFFMITPKSIRLEGL 181

Query: 104 FFSAFLNLLVSAFVVFLVFIASTIV 128
               F + +  A  + L F+ ST++
Sbjct: 182 ANQVFSSPITEAIYILLAFLTSTLL 206


>gi|133930786 egf-like module-containing mucin-like receptor 3 [Homo
           sapiens]
          Length = 652

 Score = 27.3 bits (59), Expect = 8.6
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 75  LLASLLSLLLAAAHAWRTLFFLCKGHEGSFFSAFLNLLVSAFVVFLVFI 123
           L  SLL LLLAA       F LCK    +  S  L L +  F+  L+F+
Sbjct: 364 LSVSLLCLLLAAL-----TFLLCKAIRNTSTSLHLQLSLCLFLAHLLFL 407


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.142    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,001,180
Number of Sequences: 37866
Number of extensions: 267315
Number of successful extensions: 818
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 815
Number of HSP's gapped (non-prelim): 12
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.