LRRC20 30249

Name: LRRC20	Sequence: fasta or formatted (134aa)		NCBI GI: 46397373
Description: leucine rich repeat containing 20 isoform 2		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt prot [184aa] leucine rich repeat containing 20 isoform 1 alt prot [128aa] leucine rich repeat containing 20 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 14 2 C cysteine 0.0 0 0 D aspartate 3.7 5 1 E glutamate 10.4 14 2 F phenylalanine 3.7 5 1 G glycine 3.0 4 1 H histidine 2.2 3 1 I isoleucine 4.5 6 1 K lysine 4.5 6 2 L leucine 14.9 20 1 M methionine 3.7 5 1 N asparagine 6.0 8 1 P proline 8.2 11 2 Q glutamine 3.0 4 1 R arginine 6.0 8 1 S serine 5.2 7 1 T threonine 3.0 4 1 V valine 7.5 10 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 20 isoform 2 LRRC20 0.898 leucine rich repeat containing 20 isoform 1 LRRC20 0.500 leucine rich repeat containing 20 isoform 3 LRRC40 0.127 leucine rich repeat containing 40 PHLPP1 0.127 PH domain and leucine rich repeat protein phosphatas... CNOT6 0.123 CCR4-NOT transcription complex, subunit 6 SLIT3 0.119 slit homolog 3 LRRC57 0.119 leucine rich repeat containing 57 CNOT6L 0.114 CCR4-NOT transcription complex, subunit 6-like [Hom... LRRIQ4 0.114 leucine-rich repeats and IQ motif containing 4 [Hom... SHOC2 0.114 soc-2 suppressor of clear homolog MFHAS1 0.110 malignant fibrous histiocytoma amplified sequence 1... LRCH3 0.110 leucine-rich repeats and calponin homology (CH) doma... LOC401387 0.106 leucine-rich repeat and death domain-containing pro... LRRC59 0.106 leucine rich repeat containing 59 LGR4 0.106 leucine-rich repeat-containing G protein-coupled re... LRRC39 0.106 leucine rich repeat containing 39 LRRC18 0.102 leucine rich repeat containing 18 ISLR 0.097 immunoglobulin superfamily containing leucine-rich r... ISLR 0.097 immunoglobulin superfamily containing leucine-rich re... LGR5 0.097 leucine-rich repeat-containing G protein-coupled rece... LRRC47 0.097 leucine rich repeat containing 47 LRRC58 0.097 leucine rich repeat containing 58 LRDD 0.093 leucine rich repeat and death domain containing prot... LRDD 0.093 leucine rich repeat and death domain containing prot... LRDD 0.093 leucine rich repeat and death domain containing prot... LRSAM1 0.093 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.093 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.093 leucine rich repeat and sterile alpha motif containi... LRRC10 0.093 leucine rich repeat containing 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.