Name: ASPSCR1 | Sequence: fasta or formatted (553aa) | NCBI GI: 13129078 | |
Description: alveolar soft part sarcoma chromosome region, candidate 1
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Referenced in: Kidney
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.0 50 3 C cysteine 1.6 9 2 D aspartate 4.9 27 2 E glutamate 8.0 44 2 F phenylalanine 3.4 19 2 G glycine 7.4 41 4 H histidine 1.6 9 1 I isoleucine 1.3 7 1 K lysine 4.5 25 2 L leucine 10.8 60 2 M methionine 0.9 5 1 N asparagine 1.4 8 2 P proline 10.8 60 2 Q glutamine 5.2 29 2 R arginine 7.6 42 3 S serine 8.1 45 3 T threonine 4.7 26 2 V valine 6.3 35 2 W tryptophan 0.7 4 1 Y tyrosine 1.4 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 alveolar soft part sarcoma chromosome region, candid... UBXN6 0.041 UBX domain protein 6 ENAH 0.021 enabled homolog isoform a ENAH 0.021 enabled homolog isoform b SLC24A1 0.019 solute carrier family 24 (sodium/potassium/calcium ex... EIF3A 0.019 eukaryotic translation initiation factor 3, subunit 1... ARX 0.019 aristaless related homeobox UBXN11 0.018 socius isoform 3 UBXN11 0.018 socius isoform 1 UBXN11 0.018 socius isoform 2 PELP1 0.018 proline, glutamic acid and leucine rich protein 1 [... BSN 0.017 bassoon protein MAP7D1 0.016 MAP7 domain containing 1 LOC651986 0.016 PREDICTED: similar to forkhead box L2 TBC1D10B 0.016 TBC1 domain family, member 10B C6orf174 0.015 hypothetical protein LOC387104 NSFL1C 0.015 p47 protein isoform a NSFL1C 0.015 p47 protein isoform c MAP7 0.015 microtubule-associated protein 7 FMN2 0.014 formin 2 TNKS 0.014 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... PPP1R12C 0.014 protein phosphatase 1, regulatory subunit 12C MCTP1 0.014 multiple C2 domains, transmembrane 1 isoform L [Hom... RBM25 0.013 RNA binding motif protein 25 LOC100131202 0.013 PREDICTED: hypothetical protein SETD1A 0.013 SET domain containing 1A CASZ1 0.013 castor homolog 1, zinc finger isoform a AKAP12 0.013 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.013 A kinase (PRKA) anchor protein 12 isoform 2 PRB2 0.013 proline-rich protein BstNI subfamily 2Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.