Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 109240536
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
(773 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109240536 DC-STAMP domain containing 2 [Homo sapiens] 1555 0.0
gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens] 169 1e-41
gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens] 167 3e-41
gi|13540565 dendritic cell-specific transmembrane protein [Homo ... 70 7e-12
gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Ho... 54 4e-07
gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo sap... 54 4e-07
gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo sap... 54 4e-07
gi|225637556 hypothetical protein LOC128506 [Homo sapiens] 54 4e-07
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 49 2e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 46 1e-04
gi|153792074 proline rich 12 [Homo sapiens] 44 4e-04
gi|7706501 WW domain binding protein 11 [Homo sapiens] 43 0.001
gi|60460889 Myb protein P42POP [Homo sapiens] 42 0.002
gi|150417989 cyclin K isoform 1 [Homo sapiens] 42 0.002
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 41 0.004
gi|209862789 microtubule associated monoxygenase, calponin and L... 40 0.008
gi|146134388 YLP motif containing 1 [Homo sapiens] 40 0.008
gi|171543895 ataxin 2 [Homo sapiens] 40 0.011
gi|62953127 polyhomeotic 1-like [Homo sapiens] 40 0.011
gi|133892686 hypothetical protein LOC727830 [Homo sapiens] 40 0.011
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 39 0.018
gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens] 39 0.018
gi|223468617 family with sequence similarity 75, member C1 [Homo... 39 0.024
gi|56549694 enabled homolog isoform a [Homo sapiens] 39 0.024
gi|39930375 enabled homolog isoform b [Homo sapiens] 39 0.024
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 39 0.024
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 39 0.024
gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens] 39 0.024
gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens] 39 0.024
gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens] 39 0.024
>gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
Length = 773
Score = 1555 bits (4026), Expect = 0.0
Identities = 773/773 (100%), Positives = 773/773 (100%)
Query: 1 MPKVMKDVVHPLGGEEPSMARAVVRSVGGFTLGLSLATAYGLLELLVEGHSPWGCLVGTL 60
MPKVMKDVVHPLGGEEPSMARAVVRSVGGFTLGLSLATAYGLLELLVEGHSPWGCLVGTL
Sbjct: 1 MPKVMKDVVHPLGGEEPSMARAVVRSVGGFTLGLSLATAYGLLELLVEGHSPWGCLVGTL 60
Query: 61 TLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRAS 120
TLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRAS
Sbjct: 61 TLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRAS 120
Query: 121 EAVACGAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSIMDGVKHI 180
EAVACGAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSIMDGVKHI
Sbjct: 121 EAVACGAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSIMDGVKHI 180
Query: 181 ARALRNVWQWLLHIGDVCNSELGNPYLKCARVFDDAKDSCMMVIPQAYHLCYVLMPFKLA 240
ARALRNVWQWLLHIGDVCNSELGNPYLKCARVFDDAKDSCMMVIPQAYHLCYVLMPFKLA
Sbjct: 181 ARALRNVWQWLLHIGDVCNSELGNPYLKCARVFDDAKDSCMMVIPQAYHLCYVLMPFKLA 240
Query: 241 LCGLASLVQVFCVIPKYIQPFLRQTIGTPVIQLLNRVRQEFEFNMTATHHFSVDLNASRS 300
LCGLASLVQVFCVIPKYIQPFLRQTIGTPVIQLLNRVRQEFEFNMTATHHFSVDLNASRS
Sbjct: 241 LCGLASLVQVFCVIPKYIQPFLRQTIGTPVIQLLNRVRQEFEFNMTATHHFSVDLNASRS 300
Query: 301 LSQVAMDLHEAVSMKLHRVREALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYIT 360
LSQVAMDLHEAVSMKLHRVREALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYIT
Sbjct: 301 LSQVAMDLHEAVSMKLHRVREALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYIT 360
Query: 361 SRFLRMEAVRSTAGLPTVLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVL 420
SRFLRMEAVRSTAGLPTVLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVL
Sbjct: 361 SRFLRMEAVRSTAGLPTVLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVL 420
Query: 421 FLVFLDYAVFWVLDLARHQLQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGN 480
FLVFLDYAVFWVLDLARHQLQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGN
Sbjct: 421 FLVFLDYAVFWVLDLARHQLQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGN 480
Query: 481 ISILSRRCLLRPSEPDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERI 540
ISILSRRCLLRPSEPDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERI
Sbjct: 481 ISILSRRCLLRPSEPDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERI 540
Query: 541 SYLYNVLLSRRTNLLAALHRSVRRRAADQGHRSAFLVLASRCPCLGPFVSHFWLHQAYCL 600
SYLYNVLLSRRTNLLAALHRSVRRRAADQGHRSAFLVLASRCPCLGPFVSHFWLHQAYCL
Sbjct: 541 SYLYNVLLSRRTNLLAALHRSVRRRAADQGHRSAFLVLASRCPCLGPFVSHFWLHQAYCL 600
Query: 601 GCGQPQDEGDMENTVSCSTPGCQGLYCLTCFRLLDNTCSVCASPLSYQGDLDLELDSSDE 660
GCGQPQDEGDMENTVSCSTPGCQGLYCLTCFRLLDNTCSVCASPLSYQGDLDLELDSSDE
Sbjct: 601 GCGQPQDEGDMENTVSCSTPGCQGLYCLTCFRLLDNTCSVCASPLSYQGDLDLELDSSDE 660
Query: 661 EGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPL 720
EGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPL
Sbjct: 661 EGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPL 720
Query: 721 PEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPPK 773
PEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPPK
Sbjct: 721 PEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPPK 773
>gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens]
Length = 706
Score = 169 bits (427), Expect = 1e-41
Identities = 164/661 (24%), Positives = 271/661 (40%), Gaps = 52/661 (7%)
Query: 14 GEEPSMARAVVRSVGGFTLGLSLATAYGLLELLVEGHSPWG--CLVGTLTLAAFLSLGMG 71
GE P A + GG A GL +LLV + + ++ +L ++G G
Sbjct: 43 GEFPVTALLLGAGAGGLL-------AIGLFQLLVNPMNIYEEQKIMFLYSLVGLGAMGWG 95
Query: 72 FSRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRASEAVACGAELAL 131
S +R LLL+P+ ++GR +L A + GP AN N ++ C EL +
Sbjct: 96 TSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLRHNLNNVIASLGCTVELQI 155
Query: 132 NQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSI---------------MD- 175
N T + + PL + + + + + F + MD
Sbjct: 156 NNTRAAWRISTAPLRAMFKDLLSSKELLRAETRNISATFEDLDAQVNSETGYTPEDTMDS 215
Query: 176 GVKHIARALRNVWQWLLHIGDV----------CNSELGNPYLKCARVFDDAKDSCM--MV 223
G R R LH+ C+ + L C R FD + CM +
Sbjct: 216 GETAQGREARQAPASRLHLSTQKMYELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIW 275
Query: 224 IPQAYHLCYVLMPFKLALCGLASLVQVFCVIPKYIQPFLRQTIGTPVIQLLNRVRQEFEF 283
+P HL + M FK CG+A +++V+C ++ QT + + Q + + EF
Sbjct: 276 VPLLTHLLCLPMKFKF-FCGIAKVMEVWCRNRIPVEGNFGQTYDS-LNQSIRGLDGEFSA 333
Query: 284 NMTATHHFSVD-LNASRSLSQVAMDLHEAVSMKLHRVREALALMGFTTPLLLVLLYLQAL 342
N+ L + S +V+ ++ + V + R+ AL L+ +L+ +
Sbjct: 334 NIDFKEEKQAGVLGLNTSWERVSTEVRDYVYRQEARLEWALGLLHVLLSCTFLLVLHASF 393
Query: 343 FYRYCYLNWDHYDNIYITSRFLRMEAVRSTAGLPTVLPLSAHEARRYIPPGSIFLSQWEK 402
Y Y + +DNIYI++ F +++ R G T+LPL E + I P + E
Sbjct: 394 SYMDSYNHDIRFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEM 453
Query: 403 FFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLARHQLQGEIVARSPVLVSLTVEGTGYA 462
+ E + LLL++ L LD+A++ + D RH + RS + + V G
Sbjct: 454 SNVVRELLETLPILLLLVVLCGLDWALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSML 513
Query: 463 GNIYRDLVSAFDVLQQGNISILSRRCLLRPSEPDSTGYIVIGVMYGLCFFITLFGSYVSR 522
+ R + A + + + + CL +P D+ Y V GL + L ++ R
Sbjct: 514 ARLLRKTIGALNTSSETVMESNNMPCLPQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYR 573
Query: 523 LRRVICASYYPSREQERISYLYNVLLSRRTNLLAALHRSVRRRAADQGHRSAFL--VLAS 580
LRRVI A Y+P RE++RI +LYN LL +R ++ RR Q L +L
Sbjct: 574 LRRVIAAFYFPKREKKRILFLYNDLLKKRAAFTKLRRAAILRRERQQKAPRHPLADILHR 633
Query: 581 RCPCLGPFVSHFWLHQAYCLGCGQPQDEGDMENTVSCSTPGCQGLYCLTCFRLLDNTCSV 640
CP L WL + C+ C P + + C T C+ +YC +C+ + C V
Sbjct: 634 GCPLL-----RRWLCRR-CVVCQAP----ETPESYVCRTLDCEAVYCWSCWDDMRQRCPV 683
Query: 641 C 641
C
Sbjct: 684 C 684
>gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens]
Length = 681
Score = 167 bits (423), Expect = 3e-41
Identities = 154/619 (24%), Positives = 254/619 (41%), Gaps = 43/619 (6%)
Query: 54 GCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTL 113
G G L ++G G S +R LLL+P+ ++GR +L A + GP AN
Sbjct: 53 GAGAGGLLAIGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLR 112
Query: 114 RNFTRASEAVACGAELALNQTAEVLQRAKQPLVSALNKIKAIARKTKEVADRVRKFFRSI 173
N ++ C EL +N T + + PL + + + + + F +
Sbjct: 113 HNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSKELLRAETRNISATFEDL 172
Query: 174 ---------------MD-GVKHIARALRNVWQWLLHIGDV----------CNSELGNPYL 207
MD G R R LH+ C+ + L
Sbjct: 173 DAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMYELKTKLRCSYVVNQAIL 232
Query: 208 KCARVFDDAKDSCM--MVIPQAYHLCYVLMPFKLALCGLASLVQVFCVIPKYIQPFLRQT 265
C R FD + CM + +P HL + M FK CG+A +++V+C ++ QT
Sbjct: 233 SCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKF-FCGIAKVMEVWCRNRIPVEGNFGQT 291
Query: 266 IGTPVIQLLNRVRQEFEFNMTATHHFSVD-LNASRSLSQVAMDLHEAVSMKLHRVREALA 324
+ + Q + + EF N+ L + S +V+ ++ + V + R+ AL
Sbjct: 292 YDS-LNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVRDYVYRQEARLEWALG 350
Query: 325 LMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYITSRFLRMEAVRSTAGLPTVLPLSAH 384
L+ +L+ + Y Y + +DNIYI++ F +++ R G T+LPL
Sbjct: 351 LLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDRRKKLGKRTLLPLRKA 410
Query: 385 EARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLARHQLQGEI 444
E + I P + E + E + LLL++ L LD+A++ + D RH +
Sbjct: 411 EEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWALYSIFDTIRHHSFLQY 470
Query: 445 VARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGNISILSRRCLLRPSEPDSTGYIVIG 504
RS + + V G + R + A + + + + CL +P D+ Y
Sbjct: 471 SFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVMESNNMPCLPQPVGLDARAYWRAA 530
Query: 505 VMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLSRRTNLLAALHRSVRR 564
V GL + L ++ RLRRVI A Y+P RE++RI +LYN LL +R ++ R
Sbjct: 531 VPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLKKRAAFTKLRRAAILR 590
Query: 565 RAADQGHRSAFL--VLASRCPCLGPFVSHFWLHQAYCLGCGQPQDEGDMENTVSCSTPGC 622
R Q L +L CP L WL + C+ C P + + C T C
Sbjct: 591 RERQQKAPRHPLADILHRGCPLL-----RRWLCRR-CVVCQAP----ETPESYVCRTLDC 640
Query: 623 QGLYCLTCFRLLDNTCSVC 641
+ +YC +C+ + C VC
Sbjct: 641 EAVYCWSCWDDMRQRCPVC 659
>gi|13540565 dendritic cell-specific transmembrane protein [Homo
sapiens]
Length = 470
Score = 70.1 bits (170), Expect = 7e-12
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 15/233 (6%)
Query: 320 REALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYITSRFLRMEAVRSTAGLPTVL 379
++ LA G + LL L+++ F C W Y+NIYIT +F++ + P VL
Sbjct: 212 QKLLAFAGLSLVLLGTGLFMKR-FLGPC--GWK-YENIYITRQFVQFDERERHQQRPCVL 267
Query: 380 PLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLARHQ 439
PL+ E R+Y+ + + + E+ L ++ HL + + +DY ++ ++ Q
Sbjct: 268 PLNKEERRKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQ 327
Query: 440 LQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGNISILSRRCLLRPSEPDSTG 499
Q + V + L E G I+ S+F NIS+ C+ +P S
Sbjct: 328 FQS--LPGFEVHLKLHGEKQGTQDIIHD---SSF------NISVFEPNCIPKPKFLLSET 376
Query: 500 YIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLSRRT 552
++ + V+ + + L S + +L+ ++ AS+YPS E++RI YL+ LL +R+
Sbjct: 377 WVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLLKKRS 429
Score = 33.5 bits (75), Expect = 0.77
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 73 SRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRASEAVAC 125
S+ R +LL+ R+GR L+ A G+V+ G N NF + + C
Sbjct: 75 SKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKGLLDGMTC 127
>gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Homo
sapiens]
Length = 560
Score = 54.3 bits (129), Expect = 4e-07
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 322 ALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIY----ITSRFLRMEAVRSTAGLPT 377
AL T L ++ L +++ +Y +CYL +DNIY +T R + +A A PT
Sbjct: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPT 275
Query: 378 VLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLAR 437
L L A + R LSQ E +L L L+ V D+ F +
Sbjct: 276 WL-LQAAQLR---------LSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATV 325
Query: 438 HQLQGEIVARSPVLVSLTVEGT--GYAGNIYRDLVSAFDVLQ-----QGNISILSRRCLL 490
Q + V V T G+ ++ L L Q + + S RC L
Sbjct: 326 DWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPL 385
Query: 491 RPSE-PDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLS 549
P+ P + + G + L L +Y RLR I AS++ ++E R+ +L+ L
Sbjct: 386 LPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQR 445
Query: 550 R 550
R
Sbjct: 446 R 446
Score = 31.2 bits (69), Expect = 3.8
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 42 LLELLVEGHSPWGCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF 101
L LL+ P + L FLSLG+ VR L +P QGR LLL +
Sbjct: 64 LASLLLYPPGPSAMVATVCGLLVFLSLGL--VPPVRCLFALSVPTLGMEQGRRLLLSYST 121
Query: 102 GLVLQGPCANTLRNFTRASEAVACGAELAL 131
+ N L N A + + C E +L
Sbjct: 122 ATLAIAVVPNVLANVGAAGQVLRCVTEGSL 151
>gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo
sapiens]
Length = 560
Score = 54.3 bits (129), Expect = 4e-07
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 322 ALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIY----ITSRFLRMEAVRSTAGLPT 377
AL T L ++ L +++ +Y +CYL +DNIY +T R + +A A PT
Sbjct: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPT 275
Query: 378 VLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLAR 437
L L A + R LSQ E +L L L+ V D+ F +
Sbjct: 276 WL-LQAAQLR---------LSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATV 325
Query: 438 HQLQGEIVARSPVLVSLTVEGT--GYAGNIYRDLVSAFDVLQ-----QGNISILSRRCLL 490
Q + V V T G+ ++ L L Q + + S RC L
Sbjct: 326 DWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPL 385
Query: 491 RPSE-PDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLS 549
P+ P + + G + L L +Y RLR I AS++ ++E R+ +L+ L
Sbjct: 386 LPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQR 445
Query: 550 R 550
R
Sbjct: 446 R 446
Score = 31.2 bits (69), Expect = 3.8
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 42 LLELLVEGHSPWGCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF 101
L LL+ P + L FLSLG+ VR L +P QGR LLL +
Sbjct: 64 LASLLLYPPGPSAMVATVCGLLVFLSLGL--VPPVRCLFALSVPTLGMEQGRRLLLSYST 121
Query: 102 GLVLQGPCANTLRNFTRASEAVACGAELAL 131
+ N L N A + + C E +L
Sbjct: 122 ATLAIAVVPNVLANVGAAGQVLRCVTEGSL 151
>gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo
sapiens]
Length = 560
Score = 54.3 bits (129), Expect = 4e-07
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 322 ALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIY----ITSRFLRMEAVRSTAGLPT 377
AL T L ++ L +++ +Y +CYL +DNIY +T R + +A A PT
Sbjct: 216 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPT 275
Query: 378 VLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLAR 437
L L A + R LSQ E +L L L+ V D+ F +
Sbjct: 276 WL-LQAAQLR---------LSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATV 325
Query: 438 HQLQGEIVARSPVLVSLTVEGT--GYAGNIYRDLVSAFDVLQ-----QGNISILSRRCLL 490
Q + V V T G+ ++ L L Q + + S RC L
Sbjct: 326 DWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPL 385
Query: 491 RPSE-PDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLS 549
P+ P + + G + L L +Y RLR I AS++ ++E R+ +L+ L
Sbjct: 386 LPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQR 445
Query: 550 R 550
R
Sbjct: 446 R 446
Score = 31.2 bits (69), Expect = 3.8
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 42 LLELLVEGHSPWGCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF 101
L LL+ P + L FLSLG+ VR L +P QGR LLL +
Sbjct: 64 LASLLLYPPGPSAMVATVCGLLVFLSLGL--VPPVRCLFALSVPTLGMEQGRRLLLSYST 121
Query: 102 GLVLQGPCANTLRNFTRASEAVACGAELAL 131
+ N L N A + + C E +L
Sbjct: 122 ATLAIAVVPNVLANVGAAGQVLRCVTEGSL 151
>gi|225637556 hypothetical protein LOC128506 [Homo sapiens]
Length = 566
Score = 54.3 bits (129), Expect = 4e-07
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 22/241 (9%)
Query: 322 ALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIY----ITSRFLRMEAVRSTAGLPT 377
AL T L ++ L +++ +Y +CYL +DNIY +T R + +A A PT
Sbjct: 222 ALGTQRVVTGLFMLGLLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPT 281
Query: 378 VLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLAR 437
L L A + R LSQ E +L L L+ V D+ F +
Sbjct: 282 WL-LQAAQLR---------LSQEELLSCLLRLGLLALLLVATAVAVATDHVAFLLAQATV 331
Query: 438 HQLQGEIVARSPVLVSLTVEGT--GYAGNIYRDLVSAFDVLQ-----QGNISILSRRCLL 490
Q + V V T G+ ++ L L Q + + S RC L
Sbjct: 332 DWAQKLPTVPITLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCPL 391
Query: 491 RPSE-PDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLS 549
P+ P + + G + L L +Y RLR I AS++ ++E R+ +L+ L
Sbjct: 392 LPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQR 451
Query: 550 R 550
R
Sbjct: 452 R 452
Score = 31.2 bits (69), Expect = 3.8
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 42 LLELLVEGHSPWGCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF 101
L LL+ P + L FLSLG+ VR L +P QGR LLL +
Sbjct: 70 LASLLLYPPGPSAMVATVCGLLVFLSLGL--VPPVRCLFALSVPTLGMEQGRRLLLSYST 127
Query: 102 GLVLQGPCANTLRNFTRASEAVACGAELAL 131
+ N L N A + + C E +L
Sbjct: 128 ATLAIAVVPNVLANVGAAGQVLRCVTEGSL 157
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 48.5 bits (114), Expect = 2e-05
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 681 LQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPE 740
L ++ +E+L + L+ ++ E+ DE++ + +K G PLP+ V +L P P RPP
Sbjct: 470 LTEETRELLDKMLADDA--EAGAEDEKEVEELKKQGINPLPKPPPGVGLL--PTPPRPPG 525
Query: 741 TSSATK--------GAPTPASEPSVPLSPPSLPDPSHPP 771
+ T G P P P P PP +P P H P
Sbjct: 526 PQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEP 564
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 45.8 bits (107), Expect = 1e-04
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 9/132 (6%)
Query: 649 GDLDLELDSSDEEGP--QLWLAAAQRK-----DPEQAWLLQQQ-LQEVLGRSLSMESTSE 700
G L L L+S +G + W QR+ W Q+Q L + E +
Sbjct: 317 GQLSLGLESGQGQGQHEESWQDVPQRRVGSGQGGSPCWKKQEQKLDDEEEEKKEEEEKDK 376
Query: 701 SSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTP-ASEPSVPL 759
+ EE+ + EA P LT P P PP + P P P P+
Sbjct: 377 EGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPV 436
Query: 760 SPPSLPDPSHPP 771
SPP LP P PP
Sbjct: 437 SPPPLPSPPPPP 448
Score = 33.9 bits (76), Expect = 0.59
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 710 PQQRKHGQQPLPEAHQPVS-------ILTSPEPHRPPETSSATKGAPTPASEPSVPLSPP 762
P + ++P P A +P + TSP+ PP TS T PT S L+PP
Sbjct: 1907 PAPPRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPT-----SGELAPP 1961
Query: 763 SLPDPSHPPPK 773
P PS PPP+
Sbjct: 1962 G-PAPSPPPPE 1971
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 44.3 bits (103), Expect = 4e-04
Identities = 40/120 (33%), Positives = 48/120 (40%), Gaps = 20/120 (16%)
Query: 656 DSSDEEGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKH 715
D+S +GP L AAA P L S + T E L EEK P
Sbjct: 1415 DTSTPDGPPLAPAAAVPGPPPLPGL----------PSANSNGTPEPPLL-EEKPPPTPPP 1463
Query: 716 GQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPL---SPPSLPDPSHPPP 772
P P+ P P P +P S APTP+S P PL PP++P P PPP
Sbjct: 1464 APTPQPQPPPP------PPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 1517
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 675 PEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQ-QPLPEAHQPVSILTSP 733
P QA +L+ QE+ +E SE D D+ + K Q Q E+H + S
Sbjct: 329 PLQAMMLRMAGQEIPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASS 388
Query: 734 EPHRPPETSSATK-------GAPTPASEPSVPLSPPSLPD--PSHPPP 772
+ PP++ ++ G P P+ PL PP P P PPP
Sbjct: 389 QQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPP 436
Score = 30.4 bits (67), Expect = 6.5
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 14/55 (25%)
Query: 719 PLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSL-PDPSHPPP 772
PLP P P P RPP P P P +P PP P P PPP
Sbjct: 453 PLPRLLPP-----GPPPGRPP--------GPPPGPPPGLPPGPPPRGPPPRLPPP 494
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/113 (30%), Positives = 46/113 (40%), Gaps = 15/113 (13%)
Query: 663 PQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLPE 722
PQ ++ + R++ +A G S S E + S +E G + K + P P
Sbjct: 151 PQRYVLSEDRREDRRA---DTSAHSKAGSS-SPEPWARPSCTPQEGGCPRPKERESPPPS 206
Query: 723 AHQPVSI---LTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
A QPV + SP P PP P P V SPPS P P PPP
Sbjct: 207 ALQPVQLPRLALSPPPPAPP--------LPPPPPLAQVAPSPPSPPPPPRPPP 251
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 42.4 bits (98), Expect = 0.002
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 694 SMESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAP---T 750
S S S ++K PQQ QQP + +P SP+P P + A +P
Sbjct: 291 SQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKP-----SPQPSSPRQVKRAVVVSPKEEN 345
Query: 751 PASEPSVPLSP------PSLPDPSHPPP 772
A+EP P P P LP P+HPPP
Sbjct: 346 KAAEPPPPKIPKIETTHPPLP-PAHPPP 372
Score = 37.0 bits (84), Expect = 0.070
Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 671 QRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLP-----EAHQ 725
Q+KDP+Q QQ Q+ S S + ++ K + P P E
Sbjct: 303 QQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTH 362
Query: 726 PVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
P P P R P ++A A P + L +P P+HP P
Sbjct: 363 PPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAP 409
Score = 35.4 bits (80), Expect = 0.20
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 13/58 (22%)
Query: 719 PLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPD----PSHPPP 772
P P A P + P P PP P P P+ P PP LP P HPPP
Sbjct: 488 PPPPASFPPPAIPPPTPGYPP---------PPPTYNPNFPPPPPRLPPTHAVPPHPPP 536
Score = 32.7 bits (73), Expect = 1.3
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 721 PEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLP--DPSHPPP 772
P AH P P PP P PA P P PP P +P+ PPP
Sbjct: 467 PPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPP 520
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 735 PHRPPETSSATKGAPTPASEP-SVPLSPPSLPDPSHPP 771
PH PP P PA P P PP +P P PP
Sbjct: 532 PHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPP 569
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 41.2 bits (95), Expect = 0.004
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 692 SLSMESTSESSDLDEEKGPQQRKHGQQPLPEA------HQPVSILTSPEPHRPPETSSAT 745
S S S+S+S D + E P+ +K G + HQ + +P P +PP
Sbjct: 705 SSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQP 764
Query: 746 KGAPTP--ASEPSVPLSPPSLPDPSHPPPK 773
P P +P P PPS+P + P K
Sbjct: 765 PPPPPPQQQQQPPPPPPPPSMPQQAAPAMK 794
Score = 30.8 bits (68), Expect = 5.0
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 11/61 (18%)
Query: 721 PEAHQPVSILTSPEPHRPPETS--------SATKGAPTPASEPSVPLS---PPSLPDPSH 769
P A P +L EP PP TS K P PSV + PP LP P H
Sbjct: 904 PMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPH 963
Query: 770 P 770
P
Sbjct: 964 P 964
Score = 30.4 bits (67), Expect = 6.5
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 694 SMESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPAS 753
S +S S + D +EE+ Q+ Q+ L H+ ++ L+ P+ ++P + K
Sbjct: 493 SSDSDSSTDDSEEERA-QRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKH 551
Query: 754 EPSVPLSPPSLPDPSHPPPK 773
+ + PPPK
Sbjct: 552 KRKEEVEENKKSKAKEPPPK 571
Score = 30.0 bits (66), Expect = 8.5
Identities = 33/121 (27%), Positives = 43/121 (35%), Gaps = 18/121 (14%)
Query: 659 DEEGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQ 718
DEE P L + Q + L QQLQ+V + + S S P QQ
Sbjct: 915 DEEPPAPPLTSMQMQ------LYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQ 968
Query: 719 PLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLS-------PPSLPDPSHPP 771
L + P P+P PP+ + P P + S PP P HPP
Sbjct: 969 QLQQQPPPPP---PPQPQPPPQQQH--QPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPP 1023
Query: 772 P 772
P
Sbjct: 1024 P 1024
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 40.0 bits (92), Expect = 0.008
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 651 LDLELDSSDEEGPQL--WLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEK 708
L + + S EGPQL AA Q K PE+ + L + SDL
Sbjct: 1167 LFIPVHSPSTEGPQLPPVPAATQEKSPEERLFPEPLLPK------EKPKADAPSDLKAVH 1220
Query: 709 GPQQRKHGQQP--LPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPD 766
P + QP LPEA PVS SP+P +PP +S +P P P + ++P
Sbjct: 1221 SPIR----SQPVTLPEARTPVSP-GSPQP-QPPVAASTPPPSPLPICSQPQPSTEATVPS 1274
Query: 767 PSHPP 771
P+ P
Sbjct: 1275 PTQSP 1279
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 40.0 bits (92), Expect = 0.008
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
Query: 652 DLELDSSDEEGPQLWLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQ 711
D LDS G + L+ Q + +A + L+E + M+ + + PQ
Sbjct: 1433 DASLDSDQGLGGVMVLSQRQHEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQ 1492
Query: 712 QRK-------HGQQPLPEAHQPVSILTSP-----EPHRPPETSSATKGAPTPASEPSVPL 759
+ + G P P +++P + P P PP SS P + P VP+
Sbjct: 1493 ESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSS------VPVTRPPVPI 1546
Query: 760 SPPSLPDPSHPPP 772
PP P P PPP
Sbjct: 1547 PPPPPPPPLPPPP 1559
Score = 33.1 bits (74), Expect = 1.0
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 706 EEKGPQQRKHGQQPLPEAHQPVSILTSPEP-------HRPPETSSATKGAPTPASEP--- 755
+++ Q H Q+ P P+ + + PE + PP S P P+ P
Sbjct: 120 QQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTS 179
Query: 756 SVPLSPPSLPDPSHPPP 772
S P PP+ P PS PP
Sbjct: 180 SQPYLPPAQPSPSQSPP 196
Score = 32.7 bits (73), Expect = 1.3
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 716 GQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLS--PPSLPDPSHPP 771
G +P P S + P P PP + P P P++P + PP +P P PP
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPS--LPPPVMPPALPATVPPPGMPPPVMPP 567
Score = 32.3 bits (72), Expect = 1.7
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 719 PLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
PLP PV + P P PP + P P P P+ PPSLP S PPP
Sbjct: 529 PLPTMPPPVLPPSLPPPVMPPALPATV---PPPGMPP--PVMPPSLPT-SVPPP 576
Score = 32.0 bits (71), Expect = 2.2
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 669 AAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVS 728
AA DP +QQ LS++ ++ +KGP K +P+ E
Sbjct: 279 AAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEE----- 333
Query: 729 ILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHP 770
+T P + PE+ S+ + P +E P PP P P
Sbjct: 334 -VTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPEEPQSEDP 374
Score = 32.0 bits (71), Expect = 2.2
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 720 LPEAHQPVSILTS-PEPHRPPETSSATKGAPTPASEPSVPLS--PPSLPDPS----HPPP 772
+P P S+ TS P P PP SSA G P PS+ + PP LP PS PPP
Sbjct: 560 MPPPVMPPSLPTSVPPPGMPPSLSSA--GPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Score = 30.8 bits (68), Expect = 5.0
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 726 PVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPPK 773
PV +PEP + T AT P S PL PP+ P PP+
Sbjct: 320 PVVAKDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPPE 367
Score = 30.0 bits (66), Expect = 8.5
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 721 PEAHQPVSILTSPEPHRPPETSSATKGAP-TPASEPSVPLSPPS----LPDPSH 769
P ++ P S P P PP T P P ++PS SPPS P PS+
Sbjct: 154 PGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSY 207
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 39.7 bits (91), Expect = 0.011
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 19/140 (13%)
Query: 653 LELDSSDEEGPQL------WLAAAQRKDPEQAWLLQQQLQEVLGR----SLSMESTSESS 702
++ +SS+ EG + ++ QR +W +Q +G+ S+ STS +S
Sbjct: 474 VQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTS 533
Query: 703 DLDEEKGPQQRK-HGQQPLPE-----AHQPVSILTSPEPHRPPETSSATKGAPTPASEPS 756
D + G QR +G P P + +P S S PP ++ T+ P S PS
Sbjct: 534 DFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPS 593
Query: 757 VPLSPPSL---PDPSHPPPK 773
P S PS P P PK
Sbjct: 594 RPPSHPSAHGSPAPVSTMPK 613
>gi|62953127 polyhomeotic 1-like [Homo sapiens]
Length = 1004
Score = 39.7 bits (91), Expect = 0.011
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 682 QQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPET 741
QQQ Q R + T+ L +++ QQ++ QQ P+A + LT+P+P + P T
Sbjct: 404 QQQFQH---RQSQLLHTATHLQLAQQQQQQQQQQQQQQQPQA----TTLTAPQPPQVPPT 456
Query: 742 -----SSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
S + + A T +P + SP SLP + P P
Sbjct: 457 QQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAAPKP 492
>gi|133892686 hypothetical protein LOC727830 [Homo sapiens]
Length = 1347
Score = 39.7 bits (91), Expect = 0.011
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 33/135 (24%)
Query: 672 RKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDE-----EKGPQ-QRKHGQQPLPEAHQ 725
R+ E+ L QLQ +LG L + S D E+ P + +P+ +A
Sbjct: 88 RRGLEETSDLLSQLQSLLGPHLDKGDFGQLSGPDPPGEVGERAPDGASQSSHEPMEDAAP 147
Query: 726 PVSILTSPEPHRP------------PETSSATKGAPTPASEPSVPLS------------P 761
+S+L SP+P P T+S + + + EPS+PL P
Sbjct: 148 ILSLLASPDPQAKHPQDLASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPEPPALFPHP 207
Query: 762 PSLPDP---SHPPPK 773
P PDP S PPPK
Sbjct: 208 PHTPDPLACSLPPPK 222
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 38.9 bits (89), Expect = 0.018
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 25/101 (24%)
Query: 695 MESTSESSDLDEEKGPQQRKHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGA------ 748
M+ ES +EE+ QQ + G P P +P + L SP P T++A A
Sbjct: 699 MKMLDESIRKEEEQ--QQHEAGVAPQPPLKEPFASLQSPFPTDTAPTTTAPAVAVTTTTT 756
Query: 749 --------------PTPASEPSVPLS---PPSLPDPSHPPP 772
P PA P PL+ PPS P P PPP
Sbjct: 757 TTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQPPPPPP 797
Score = 32.7 bits (73), Expect = 1.3
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 12/71 (16%)
Query: 709 GPQQRKHGQQPLPEAHQPVSIL-------TSPEPHRPPETSSATKGAPTPASEPSVPLSP 761
GP ++ + P+ + P ++ SP R +S G P P +PL P
Sbjct: 194 GPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLP-----PGLPLPP 248
Query: 762 PSLPDPSHPPP 772
P LP P PPP
Sbjct: 249 PPLPPPPPPPP 259
>gi|7662340 MORC family CW-type zinc finger 2 [Homo sapiens]
Length = 970
Score = 38.9 bits (89), Expect = 0.018
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 651 LDLELDSSDEEGPQLWLAAAQRKDPEQAWL-LQQQLQEV-LGRSLSMESTSESSD--LDE 706
L +L S +++ P W+ + DPEQ +Q Q+V LG T E L E
Sbjct: 446 LPFQLSSVEKDYPDTWVCS-MNPDPEQDRCEASEQKQKVPLGTFRKDMKTQEEKQKQLTE 504
Query: 707 EKGPQQRKHG--QQPLPEAHQ------PVSILTSPEPHRPPETSSATKGAPTPASEPSVP 758
+ QQ K Q+ P Q P+ + T P P + P PA + P
Sbjct: 505 KIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPSTEEPVRRPQRPRSPPLPAVIRNAP 564
Query: 759 LSPPSLPDP 767
PPSLP P
Sbjct: 565 SRPPSLPTP 573
>gi|223468617 family with sequence similarity 75, member C1 [Homo
sapiens]
Length = 1188
Score = 38.5 bits (88), Expect = 0.024
Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 33/131 (25%)
Query: 676 EQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQR------KHGQQPLPEAHQPVSI 729
E+ W L QLQ +LG L + S D +R + +P+ +A VS
Sbjct: 104 EETWDLLSQLQSLLGPHLEKGDFGQLSGPDPPGEVGKRTPDGASRSSHEPMEDAAPIVSP 163
Query: 730 LTSPEPH---------RPPETSSATKGAPTPASEPSVPL---------------SPPSLP 765
L SP+P PP T + AS+P P PP P
Sbjct: 164 LASPDPRTKHPQDLASTPPPGPMTTSVSSLSASQPPEPSLLLERPSPEPPALFPHPPHTP 223
Query: 766 DP---SHPPPK 773
DP S PPPK
Sbjct: 224 DPLACSPPPPK 234
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 38.5 bits (88), Expect = 0.024
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 681 LQQQLQEVLGRSLSMESTSESSDLDEEKGPQQ-------RKHGQQPLPEAHQPVSILTSP 733
++ L VLG S + E +++ E QQ PLP S+ P
Sbjct: 273 VETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPP 332
Query: 734 EPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
P PP + G P P P +P P P P PP
Sbjct: 333 PPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPP 371
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 38.5 bits (88), Expect = 0.024
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 681 LQQQLQEVLGRSLSMESTSESSDLDEEKGPQQ-------RKHGQQPLPEAHQPVSILTSP 733
++ L VLG S + E +++ E QQ PLP S+ P
Sbjct: 273 VETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPP 332
Query: 734 EPHRPPETSSATKGAPTPASEPSVPLSPPSLPDPSHPPP 772
P PP + G P P P +P P P P PP
Sbjct: 333 PPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPP 371
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 38.5 bits (88), Expect = 0.024
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 733 PEPHRPPETSSATKGAPTPASEPS-VPLSPPSLPDPSHPPP 772
P P PP PTPASE + P PP+ P PS PPP
Sbjct: 763 PGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPP 803
Score = 30.0 bits (66), Expect = 8.5
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 716 GQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLS-PPSLP 765
G P P P I P P P S AT GAPTP P P + PP +P
Sbjct: 760 GPPPGPPTPPPEDI---PAPTEPTPASEAT-GAPTPPPAPPSPSAPPPVVP 806
Score = 30.0 bits (66), Expect = 8.5
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 696 ESTSESSDLDEEKGPQQRKHGQQPLP----EAHQPVSI--LTSPEPHRPPETSSATKGAP 749
++ SD ++ G R + P P EA +PV + P + T G P
Sbjct: 986 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP 1045
Query: 750 TPASEPSVPLSPPSLPDP---SHPPP 772
P V + P PDP S+ PP
Sbjct: 1046 FPVPPREVIKASPHAPDPSAFSYAPP 1071
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 38.5 bits (88), Expect = 0.024
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 733 PEPHRPPETSSATKGAPTPASEPS-VPLSPPSLPDPSHPPP 772
P P PP PTPASE + P PP+ P PS PPP
Sbjct: 780 PGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPP 820
Score = 30.0 bits (66), Expect = 8.5
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 716 GQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLS-PPSLP 765
G P P P I P P P S AT GAPTP P P + PP +P
Sbjct: 777 GPPPGPPTPPPEDI---PAPTEPTPASEAT-GAPTPPPAPPSPSAPPPVVP 823
Score = 30.0 bits (66), Expect = 8.5
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 696 ESTSESSDLDEEKGPQQRKHGQQPLP----EAHQPVSI--LTSPEPHRPPETSSATKGAP 749
++ SD ++ G R + P P EA +PV + P + T G P
Sbjct: 1002 QNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLP 1061
Query: 750 TPASEPSVPLSPPSLPDP---SHPPP 772
P V + P PDP S+ PP
Sbjct: 1062 FPVPPREVIKASPHAPDPSAFSYAPP 1087
>gi|21536411 bridging integrator 1 isoform 6 [Homo sapiens]
Length = 482
Score = 38.5 bits (88), Expect = 0.024
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 19/130 (14%)
Query: 660 EEGPQLW-------------LAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDE 706
EE P LW +A + ++ L Q L +VL + +E S+
Sbjct: 194 EELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVL---VGLEKQHGSNTFTV 250
Query: 707 EKGPQQR---KHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPS 763
+ P K + P P P + H P AT GA P S + PP
Sbjct: 251 KAQPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPV 310
Query: 764 LPDPSHPPPK 773
P P H P K
Sbjct: 311 PPPPKHTPSK 320
>gi|21536409 bridging integrator 1 isoform 5 [Homo sapiens]
Length = 518
Score = 38.5 bits (88), Expect = 0.024
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 19/130 (14%)
Query: 660 EEGPQLW-------------LAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDE 706
EE P LW +A + ++ L Q L +VL + +E S+
Sbjct: 194 EELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVL---VGLEKQHGSNTFTV 250
Query: 707 EKGPQQR---KHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPS 763
+ P K + P P P + H P AT GA P S + PP
Sbjct: 251 KAQPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPV 310
Query: 764 LPDPSHPPPK 773
P P H P K
Sbjct: 311 PPPPKHTPSK 320
>gi|21536400 bridging integrator 1 isoform 1 [Homo sapiens]
Length = 593
Score = 38.5 bits (88), Expect = 0.024
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 19/130 (14%)
Query: 660 EEGPQLW-------------LAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDE 706
EE P LW +A + ++ L Q L +VL + +E S+
Sbjct: 225 EELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVL---VGLEKQHGSNTFTV 281
Query: 707 EKGPQQR---KHGQQPLPEAHQPVSILTSPEPHRPPETSSATKGAPTPASEPSVPLSPPS 763
+ P K + P P P + H P AT GA P S + PP
Sbjct: 282 KAQPSDNAPAKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPV 341
Query: 764 LPDPSHPPPK 773
P P H P K
Sbjct: 342 PPPPKHTPSK 351
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,632,900
Number of Sequences: 37866
Number of extensions: 1501264
Number of successful extensions: 16857
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 12985
Number of HSP's gapped (non-prelim): 3502
length of query: 773
length of database: 18,247,518
effective HSP length: 110
effective length of query: 663
effective length of database: 14,082,258
effective search space: 9336537054
effective search space used: 9336537054
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.