ERCC8 29901

Name: ERCC8	Sequence: fasta or formatted (396aa)		NCBI GI: 4557467
Description: excision repair cross-complementing rodent repair deficiency, complementation group 8 isoform 1		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 17 1 C cysteine 3.3 13 2 D aspartate 6.6 26 3 E glutamate 5.3 21 2 F phenylalanine 3.0 12 1 G glycine 7.8 31 3 H histidine 3.3 13 2 I isoleucine 3.0 12 1 K lysine 4.5 18 2 L leucine 8.8 35 2 M methionine 1.5 6 1 N asparagine 4.8 19 2 P proline 3.0 12 1 Q glutamine 3.3 13 1 R arginine 5.3 21 2 S serine 10.6 42 3 T threonine 7.3 29 3 V valine 8.3 33 1 W tryptophan 1.8 7 1 Y tyrosine 4.0 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 excision repair cross-complementing rodent repair def... WDR38 0.070 WD repeat domain 38 FBXW7 0.063 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.063 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.063 F-box and WD repeat domain containing 7 isoform 2 [H... TAF5 0.059 TBP-associated factor 5 WDR5 0.058 WD repeat domain 5 WDR5 0.058 WD repeat domain 5 WDR69 0.055 WD repeat domain 69 TBL1XR1 0.055 transducin (beta)-like 1 X-linked receptor 1 CDC20 0.055 cell division cycle 20 PRPF4 0.054 PRP4 pre-mRNA processing factor 4 homolog RBBP7 0.054 retinoblastoma binding protein 7 TBL1Y 0.053 transducin beta-like 1Y TBL1Y 0.053 transducin beta-like 1Y TBL1Y 0.053 transducin beta-like 1Y WSB2 0.053 WD SOCS-box protein 2 RBBP4 0.053 retinoblastoma binding protein 4 isoform c RBBP4 0.053 retinoblastoma binding protein 4 isoform b RBBP4 0.053 retinoblastoma binding protein 4 isoform a TBL1X 0.053 transducin beta-like 1X isoform b TBL1X 0.053 transducin beta-like 1X isoform b TBL1X 0.053 transducin beta-like 1X isoform a TBL1X 0.053 transducin beta-like 1X isoform a WDR5B 0.053 WD repeat domain 5B WDR88 0.052 PQQ repeat and WD repeat domain containing WSB1 0.050 WD repeat and SOCS box-containing 1 isoform 1 WSB1 0.049 WD repeat and SOCS box-containing 1 isoform 2 SNRNP40 0.048 WD repeat domain 57 (U5 snRNP specific) DDB2 0.047 damage-specific DNA binding protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.