Guide to the Human Genome
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Search of human proteins with 45505165

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45505165 leukocyte specific transcript 1 isoform 1 [Homo
sapiens]
         (118 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45505165 leukocyte specific transcript 1 isoform 1 [Homo sapi...   250   1e-67
gi|45505161 leukocyte specific transcript 1 isoform 2 [Homo sapi...   158   1e-39
gi|45580740 leukocyte specific transcript 1 isoform 4 [Homo sapi...   138   1e-33
gi|17986270 dopamine receptor D2 isoform short [Homo sapiens]          35   0.017
gi|4503385 dopamine receptor D2 isoform long [Homo sapiens]            33   0.037
gi|239753510 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|239742053 PREDICTED: hypothetical protein XP_002342380 [Homo ...    30   0.41 
gi|8922927 hypothetical protein LOC55321 [Homo sapiens]                30   0.41 
gi|28610151 interleukin 7 receptor precursor [Homo sapiens]            29   0.70 
gi|153945755 zinc finger protein 608 [Homo sapiens]                    29   0.70 
gi|6912446 potassium voltage-gated channel, subfamily H, member ...    28   1.2  
gi|34101282 sodium channel, nonvoltage-gated 1, delta isoform 2 ...    28   1.2  
gi|194353989 sodium channel, nonvoltage-gated 1, delta isoform 1...    28   1.2  
gi|239742474 PREDICTED: hypothetical protein [Homo sapiens]            27   2.6  
gi|169167633 PREDICTED: hypothetical protein LOC100132916 [Homo ...    27   3.5  
gi|4503489 ephrin-B3 precursor [Homo sapiens]                          27   3.5  
gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens]    27   3.5  
gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens]     27   3.5  
gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]             27   3.5  
gi|71274136 family with sequence similarity 24, member A [Homo s...    27   3.5  
gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog ...    27   4.5  
gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog ...    27   4.5  
gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Ho...    27   4.5  
gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Ho...    27   4.5  
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]            27   4.5  
gi|169167848 PREDICTED: hypothetical protein LOC100132916 [Homo ...    27   4.5  
gi|169167926 PREDICTED: hypothetical protein LOC100132916 [Homo ...    27   4.5  
gi|94536846 synaptotagmin VIII [Homo sapiens]                          27   4.5  
gi|11545920 lin-7 homolog B [Homo sapiens]                             26   5.9  
gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens]         26   5.9  

>gi|45505165 leukocyte specific transcript 1 isoform 1 [Homo
           sapiens]
          Length = 118

 Score =  250 bits (639), Expect = 1e-67
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 1   MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWPRAPQSRNSTMHLCR 60
           MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWPRAPQSRNSTMHLCR
Sbjct: 1   MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWPRAPQSRNSTMHLCR 60

Query: 61  GCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLWSSQ 118
           GCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLWSSQ
Sbjct: 61  GCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLWSSQ 118


>gi|45505161 leukocyte specific transcript 1 isoform 2 [Homo
           sapiens]
          Length = 75

 Score =  158 bits (399), Expect = 1e-39
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 46  PRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQ 105
           PRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQ
Sbjct: 3   PRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQ 62

Query: 106 PRRVDRVPLWSSQ 118
           PRRVDRVPLWSSQ
Sbjct: 63  PRRVDRVPLWSSQ 75


>gi|45580740 leukocyte specific transcript 1 isoform 4 [Homo
           sapiens]
          Length = 63

 Score =  138 bits (347), Expect = 1e-33
 Identities = 63/63 (100%), Positives = 63/63 (100%)

Query: 56  MHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLW 115
           MHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLW
Sbjct: 1   MHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQPRRVDRVPLW 60

Query: 116 SSQ 118
           SSQ
Sbjct: 61  SSQ 63


>gi|17986270 dopamine receptor D2 isoform short [Homo sapiens]
          Length = 414

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 74  AETREAPRRIQELTMPALLRTNPPEHPRHLPQP 106
           A  +EA RR QEL M  L  T+PPE  R+ P P
Sbjct: 238 APLKEAARRAQELEMEMLSSTSPPERTRYSPIP 270


>gi|4503385 dopamine receptor D2 isoform long [Homo sapiens]
          Length = 443

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 36  RRVKRLERSWPRAPQSRNST----MHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPAL 91
           +R  R  R+  RAP   N T    M LC      +           EA RR QEL M  L
Sbjct: 226 KRSSRAFRAHLRAPLKGNCTHPEDMKLCTVIM-KSNGSFPVNRRRVEAARRAQELEMEML 284

Query: 92  LRTNPPEHPRHLPQP 106
             T+PPE  R+ P P
Sbjct: 285 SSTSPPERTRYSPIP 299


>gi|239753510 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 12/20 (60%), Positives = 14/20 (70%)

Query: 85  ELTMPALLRTNPPEHPRHLP 104
           EL + ALL + PP HP HLP
Sbjct: 121 ELLVEALLTSKPPAHPSHLP 140


>gi|239742053 PREDICTED: hypothetical protein XP_002342380 [Homo
           sapiens]
          Length = 311

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 12/20 (60%), Positives = 14/20 (70%)

Query: 85  ELTMPALLRTNPPEHPRHLP 104
           EL + ALL + PP HP HLP
Sbjct: 148 ELLVEALLTSKPPAHPSHLP 167


>gi|8922927 hypothetical protein LOC55321 [Homo sapiens]
          Length = 256

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 7   DICIYGGLGL---GGLLLLAVVLLSACLCWLHRR 37
           D CI  GLGL   GG+LL  ++++S C   L+RR
Sbjct: 174 DRCIIAGLGLLTVGGMLLSVLLMVSLCKGELYRR 207


>gi|28610151 interleukin 7 receptor precursor [Homo sapiens]
          Length = 459

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 22  LAVVLLSACLCWLHRRVKRLERSWPRAPQSRNSTMHLCR 60
           +A++++ AC+ W  +R+K +   WP  P  + +  HLC+
Sbjct: 253 VALLVILACVLW-KKRIKPIV--WPSLPDHKKTLEHLCK 288


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 36  RRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRD 69
           +RV+   RS P  PQ +  T  L +GC  P + D
Sbjct: 521 KRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLID 554


>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
           [Homo sapiens]
          Length = 1017

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 38  VKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNP 96
           + R  RS PR  Q R+ ++        P++ +  SGAE    PR  + L +P L    P
Sbjct: 697 LSRFSRS-PRLSQPRSESLGSSSDKTLPSITEAESGAEPGGGPRPRRPLLLPNLSPARP 754


>gi|34101282 sodium channel, nonvoltage-gated 1, delta isoform 2
           [Homo sapiens]
          Length = 638

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 1   MLSRNDDIC-IYGGLGLGGLLLLAVVLLSACLCWL---HRRVKRLERSWPRAPQSRNSTM 56
           +LS    +C ++ G  +  LL L  +LL A    L    RR++R   SWPRA  +  ++ 
Sbjct: 524 LLSAMGSLCSLWFGASVLSLLELLELLLDASALTLVLGGRRLRRAWFSWPRASPASGASS 583

Query: 57  HLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQP 106
                 Q P     TS       P  +  + +P +L     E     PQP
Sbjct: 584 IKPEASQMPPPAGGTSDDPEPSGP-HLPRVMLPGVLAGVSAEESWAGPQP 632


>gi|194353989 sodium channel, nonvoltage-gated 1, delta isoform 1
           [Homo sapiens]
          Length = 704

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 1   MLSRNDDIC-IYGGLGLGGLLLLAVVLLSACLCWL---HRRVKRLERSWPRAPQSRNSTM 56
           +LS    +C ++ G  +  LL L  +LL A    L    RR++R   SWPRA  +  ++ 
Sbjct: 590 LLSAMGSLCSLWFGASVLSLLELLELLLDASALTLVLGGRRLRRAWFSWPRASPASGASS 649

Query: 57  HLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPEHPRHLPQP 106
                 Q P     TS       P  +  + +P +L     E     PQP
Sbjct: 650 IKPEASQMPPPAGGTSDDPEPSGP-HLPRVMLPGVLAGVSAEESWAGPQP 698


>gi|239742474 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 589

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 39  KRLERSWPRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAPRRIQELTMPALLRTNPPE 98
           K  ER  PR P+  ++  H  RG +  AVR++ +  +       ++E+    L R   P 
Sbjct: 211 KHTERG-PRGPRQGSTDKHTERGVRVGAVREVPTSTQRGGRVGAVREVRTSTLER--GPR 267

Query: 99  HPRHLPQPRRVDRVP 113
            PR     +  +R P
Sbjct: 268 GPRQGSTDKHTERGP 282


>gi|169167633 PREDICTED: hypothetical protein LOC100132916 [Homo
           sapiens]
          Length = 160

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 13  GLGLGGLLLLAVVLLSACLCW--LHRRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDL 70
           GLG+  L+LLA V+    LC+  L+ + +RL+          +ST       +  A+   
Sbjct: 70  GLGIAALVLLAFVISVCVLCYLFLYTKPQRLDTGLKLQHLEASSTQEGKSNGKTKALNSN 129

Query: 71  TSGAETR----EAPRRIQELTMPA 90
            +   T     EA   IQE TM A
Sbjct: 130 AASNATNETYYEADDIIQEKTMDA 153


>gi|4503489 ephrin-B3 precursor [Homo sapiens]
          Length = 340

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 10  IYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWP 46
           + G  G   LLLL V      +CW  RR K  E   P
Sbjct: 228 VAGAAGGLALLLLGVAGAGGAMCWRRRRAKPSESRHP 264


>gi|154800467 lung cancer-related protein 8 isoform b [Homo sapiens]
          Length = 573

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 15  GLGGLLLLAVVLLSACLCWLHRRVKRLERSWP 46
           G GG+ +L       C  W  RR+K+L R  P
Sbjct: 517 GFGGITMLFTGYFVLCCSWSFRRLKKLCRPLP 548


>gi|21361664 lung cancer-related protein 8 isoform a [Homo sapiens]
          Length = 609

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 15  GLGGLLLLAVVLLSACLCWLHRRVKRLERSWP 46
           G GG+ +L       C  W  RR+K+L R  P
Sbjct: 553 GFGGITMLFTGYFVLCCSWSFRRLKKLCRPLP 584


>gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]
          Length = 740

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 8   ICIYGGLGLGGLLLLAVVLLSACLC 32
           + + G     GLLL + V+LSACLC
Sbjct: 682 LLLSGLCAASGLLLASTVVLSACLC 706


>gi|71274136 family with sequence similarity 24, member A [Homo
          sapiens]
          Length = 105

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 18/69 (26%)

Query: 14 LGLGG-LLLLAVVLLSACLCWLHRRVKRLERS-----------------WPRAPQSRNST 55
          +G+G  LL+ A+VLLS   C   +  K L+ +                 W    Q++ +T
Sbjct: 13 IGIGSSLLVAAMVLLSVVFCLYFKVAKALKAAKDPDAVAVKNHNPDKVCWATNSQAKATT 72

Query: 56 MHLCRGCQC 64
          M  C   QC
Sbjct: 73 MESCPSLQC 81


>gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog A
           isoform 2 [Homo sapiens]
          Length = 548

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 34  LHRRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAP-----RRIQEL-- 86
           +HR+V  + R+ P A  S  + + +    + P+ R+L+   E +  P      RI+E   
Sbjct: 241 VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK 300

Query: 87  ----TMPALLRTNP---PEHPRHLPQPRRVDRVPLWSS 117
               T  ++++ +P   P  PR  P PRR+  VP  SS
Sbjct: 301 RTYETFKSIMKKSPFSGPTDPR--PPPRRI-AVPSRSS 335


>gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog A
           isoform 1 [Homo sapiens]
          Length = 551

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 34  LHRRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDLTSGAETREAP-----RRIQEL-- 86
           +HR+V  + R+ P A  S  + + +    + P+ R+L+   E +  P      RI+E   
Sbjct: 244 VHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPDTDDRHRIEEKRK 303

Query: 87  ----TMPALLRTNP---PEHPRHLPQPRRVDRVPLWSS 117
               T  ++++ +P   P  PR  P PRR+  VP  SS
Sbjct: 304 RTYETFKSIMKKSPFSGPTDPR--PPPRRI-AVPSRSS 338


>gi|217330639 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
           sapiens]
          Length = 880

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 68  RDLTSGAETREAPRRIQELTMPALLRTNPP---EHPRHLPQPRRVDRVPLW 115
           R L   ++T    RR   L  P     +PP   +  R LPQP+   ++P W
Sbjct: 441 RSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQLPSW 491


>gi|217330622 phosphoinositide-3-kinase, regulatory subunit 5 [Homo
           sapiens]
          Length = 880

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 68  RDLTSGAETREAPRRIQELTMPALLRTNPP---EHPRHLPQPRRVDRVPLW 115
           R L   ++T    RR   L  P     +PP   +  R LPQP+   ++P W
Sbjct: 441 RSLEGSSDTALPLRRAGSLCSPLDEPVSPPSRAQRSRSLPQPKLGTQLPSW 491


>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 292

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 72  SGAETREAPRRIQELTMP-ALLRTNPPEHPRHLPQPRR 108
           +GA  R A R++     P +L RT+   HP H P P R
Sbjct: 13  AGAGRRPAARQVAPPGGPXSLARTHSRRHPDHAPPPGR 50


>gi|169167848 PREDICTED: hypothetical protein LOC100132916 [Homo
           sapiens]
          Length = 160

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 13  GLGLGGLLLLAVVLLSACLCW--LHRRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDL 70
           GLG+  L+LLA V+    LC+  L+ + +RL+          +ST       +  A+   
Sbjct: 70  GLGIAALVLLAFVISVCVLCYLFLYTKPQRLDTGLKLQHLEPSSTQEGKSNGKTKALNSN 129

Query: 71  TSGAETR----EAPRRIQELTMPA 90
            +   T     EA   IQE TM A
Sbjct: 130 AASNATNETYYEADDIIQEKTMDA 153


>gi|169167926 PREDICTED: hypothetical protein LOC100132916 [Homo
           sapiens]
          Length = 160

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)

Query: 13  GLGLGGLLLLAVVLLSACLCW--LHRRVKRLERSWPRAPQSRNSTMHLCRGCQCPAVRDL 70
           GLG+  L+LLA V+    LC+  L+ + +RL+          +ST       +  A+   
Sbjct: 70  GLGIAALVLLAFVISVCVLCYLFLYTKPQRLDTGLKLQHLEPSSTQEGKSNGKTKALNSN 129

Query: 71  TSGAETR----EAPRRIQELTMPA 90
            +   T     EA   IQE TM A
Sbjct: 130 AASNATNETYYEADDIIQEKTMDA 153


>gi|94536846 synaptotagmin VIII [Homo sapiens]
          Length = 401

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 10  IYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWPRAPQSRNSTMHL 58
           I G L  G LL+  ++  + C C  HR+  R + S         +T HL
Sbjct: 52  IAGALAAGVLLVSCLLCAACCCCRRHRKKPRDKESVGLGSARGTTTTHL 100


>gi|11545920 lin-7 homolog B [Homo sapiens]
          Length = 207

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 12/80 (15%)

Query: 38  VKRLERSWPRAPQSRNSTMHLCRGCQCPAVR----------DLTSGAETREAPRRIQELT 87
           ++RL+RS    PQ   +   + +   C A+R          D+T  AE R       + T
Sbjct: 21  LERLQRSGELPPQKLQALQRVLQSRFCSAIREVYEQLYDTLDITGSAEIR--AHATAKAT 78

Query: 88  MPALLRTNPPEHPRHLPQPR 107
           + A   +    HPR +  P+
Sbjct: 79  VAAFTASEGHAHPRVVELPK 98


>gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens]
          Length = 858

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)

Query: 18  GLLLLAVVLLSACLCWLHRRVK----RLERSWPRAPQSRN 53
           G LLLA  LL  CL   H ++K     LE++ P+  +++N
Sbjct: 65  GKLLLAEALLEQCLKENHAKIKDSMPLLEKNEPKMSEAKN 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.139    0.462 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,375,290
Number of Sequences: 37866
Number of extensions: 242309
Number of successful extensions: 1126
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 37
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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