Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4507491
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507491 thimet oligopeptidase 1 [Homo sapiens]
(689 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507491 thimet oligopeptidase 1 [Homo sapiens] 1400 0.0
gi|14149738 neurolysin [Homo sapiens] 902 0.0
gi|156105687 mitochondrial intermediate peptidase [Homo sapiens] 198 1e-50
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 40 0.009
gi|153945715 myosin VC [Homo sapiens] 38 0.027
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 37 0.061
gi|157364947 ecotropic viral integration site 1 isoform a [Homo ... 35 0.18
gi|157364945 ecotropic viral integration site 1 isoform b [Homo ... 35 0.18
gi|157364943 ecotropic viral integration site 1 isoform b [Homo ... 35 0.18
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 33 1.2
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 33 1.2
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 33 1.2
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens] 33 1.2
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 32 1.5
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 32 1.5
gi|20070228 nucleobindin 1 [Homo sapiens] 32 1.5
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 32 2.0
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 32 2.0
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 32 2.0
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 32 2.0
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 32 2.0
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 32 2.0
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 32 2.0
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 32 2.6
gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens] 32 2.6
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 32 2.6
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 31 3.3
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 31 3.3
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 31 3.3
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 31 3.3
>gi|4507491 thimet oligopeptidase 1 [Homo sapiens]
Length = 689
Score = 1400 bits (3623), Expect = 0.0
Identities = 689/689 (100%), Positives = 689/689 (100%)
Query: 1 MKPPAACAGDMADAASPCSVVNDLRWDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVS 60
MKPPAACAGDMADAASPCSVVNDLRWDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVS
Sbjct: 1 MKPPAACAGDMADAASPCSVVNDLRWDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVS 60
Query: 61 YESTLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQ 120
YESTLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQ
Sbjct: 61 YESTLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQ 120
Query: 121 RIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNK 180
RIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNK
Sbjct: 121 RIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNK 180
Query: 181 NLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKV 240
NLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKV
Sbjct: 181 NLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKV 240
Query: 241 EEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQ 300
EEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQ
Sbjct: 241 EEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQ 300
Query: 301 KLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYF 360
KLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYF
Sbjct: 301 KLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYF 360
Query: 361 PVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREG 420
PVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREG
Sbjct: 361 PVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREG 420
Query: 421 KYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMH 480
KYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMH
Sbjct: 421 KYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMH 480
Query: 481 QLCSQAEFAMFSGTHVERDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLI 540
QLCSQAEFAMFSGTHVERDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLI
Sbjct: 481 QLCSQAEFAMFSGTHVERDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLI 540
Query: 541 ESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGH 600
ESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGH
Sbjct: 541 ESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGH 600
Query: 601 LAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRR 660
LAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRR
Sbjct: 601 LAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRR 660
Query: 661 FLGRDPKQDAFLLSKGLQVGGCEPEPQVC 689
FLGRDPKQDAFLLSKGLQVGGCEPEPQVC
Sbjct: 661 FLGRDPKQDAFLLSKGLQVGGCEPEPQVC 689
>gi|14149738 neurolysin [Homo sapiens]
Length = 704
Score = 902 bits (2330), Expect = 0.0
Identities = 426/656 (64%), Positives = 523/656 (79%)
Query: 22 NDLRWDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNI 81
N LRWDLS +QI+ RT ELI QTK+VYD VG E+V+YE+ L+ALADVEV Y V+R +
Sbjct: 46 NVLRWDLSPEQIKTRTEELIVQTKQVYDAVGMLGIEEVTYENCLQALADVEVKYIVERTM 105
Query: 82 LDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARY 141
LDFPQHVS K++R ASTEADK+LS FD+EMSMR D+++RIV LQE ++PEA RY
Sbjct: 106 LDFPQHVSSDKEVRAASTEADKRLSRFDIEMSMRGDIFERIVHLQETCDLGKIKPEARRY 165
Query: 142 LERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPE 201
LE+ IK+G+RNGLHLP + Q IK +KK++S LCIDFNKNLNED TFL F+ ELG LP+
Sbjct: 166 LEKSIKMGKRNGLHLPEQVQNEIKSMKKRMSELCIDFNKNLNEDDTFLVFSKAELGALPD 225
Query: 202 DFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVT 261
DF++SLEK +D K K+TLKYPHYFP++KKC +PETRR++E AFN RCKEEN IL++L+
Sbjct: 226 DFIDSLEKTDDDKYKITLKYPHYFPVMKKCCIPETRRRMEMAFNTRCKEENTIILQQLLP 285
Query: 262 LRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAEC 321
LR + ++LLG+ THAD+VLEMN AK++ V FLD+L+QKLKPLGE ER IL LK+ EC
Sbjct: 286 LRTKVAKLLGYSTHADFVLEMNTAKSTSRVTAFLDDLSQKLKPLGEAEREFILNLKKKEC 345
Query: 322 ERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLGLAF 381
+ RG +DG+I AWD+ YYM Q EE +Y +DQ LKEYFP++VVT GLL YQELLGL+F
Sbjct: 346 KDRGFEYDGKINAWDLYYYMTQTEELKYSIDQEFLKEYFPIEVVTEGLLNTYQELLGLSF 405
Query: 382 HHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGHAACFGLQPGCLRQDGSR 441
A W++ V LYT +D A+GEV+G+FYLDLYPREGKY HAACFGLQPGCL DGSR
Sbjct: 406 EQMTDAHVWNKSVTLYTVKDKATGEVLGQFYLDLYPREGKYNHAACFGLQPGCLLPDGSR 465
Query: 442 QIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSGTHVERDFV 501
+A+AA+V NF++P A PSLL+HDEV TYFHEFGHVMHQ+C+Q +FA FSGT+VE DFV
Sbjct: 466 MMAVAALVVNFSQPVAGRPSLLRHDEVRTYFHEFGHVMHQICAQTDFARFSGTNVETDFV 525
Query: 502 EAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVD 561
E PSQMLENWVW+ + L R+S+HY+ GS + +LLEKL+ SR NTGL LRQIVL+KVD
Sbjct: 526 EVPSQMLENWVWDVDSLRRLSKHYKDGSPIADDLLEKLVASRLVNTGLLTLRQIVLSKVD 585
Query: 562 QALHTQTDADPAEEYARLCQEILGVPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMD 621
Q+LHT T D A EYA+ C EILGV ATPGTNMPATFGHLAGGYD QYYGYLWSEV+SMD
Sbjct: 586 QSLHTNTSLDAASEYAKYCSEILGVAATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSMD 645
Query: 622 MFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRRFLGRDPKQDAFLLSKGL 677
MF++ FK+EG++N +VGM YR+ IL+PGGS D ML FL R+P Q AFL+S+GL
Sbjct: 646 MFYSCFKKEGIMNPEVGMKYRNLILKPGGSLDGMDMLHNFLKREPNQKAFLMSRGL 701
>gi|156105687 mitochondrial intermediate peptidase [Homo sapiens]
Length = 713
Score = 198 bits (504), Expect = 1e-50
Identities = 161/605 (26%), Positives = 271/605 (44%), Gaps = 42/605 (6%)
Query: 80 NILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIV-WLQEKVQKDSLRPEA 138
++ DF + P R A+ EA + + +++ D+YQ + L +K DSL PE
Sbjct: 120 DLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLQKLLADKKLVDSLDPET 179
Query: 139 ARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFN-KNLNEDTTFLPFTLQELG 197
R E + +G+HL +E ++ +D N K L+ +TFL T
Sbjct: 180 RRVAELFMFDFEISGIHLDKEKRKR-----------AVDLNVKILDLSSTFLMGT----- 223
Query: 198 GLPEDFLNSLEKM---EDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCA 254
+F N +EK E + T H ++ H V EA N
Sbjct: 224 ----NFPNKIEKHLLPEHIRRNFTSAGDHI--IIDGLHAESPDDLVREAAYKIFLYPNAG 277
Query: 255 ILK---ELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERA 311
LK EL++ R ++L+G+ T + L+ +AK +TV FL++L+ KL ++
Sbjct: 278 QLKCLEELLSSRDLLAKLVGYSTFSHRALQGTIAKNPETVMQFLEKLSDKLSERTLKDFE 337
Query: 312 VILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLG 371
+I +K + P + + WD YY + RY ++ +L +F + GL
Sbjct: 338 MIRGMKM-----KLNPQNSEVMPWDPPYYSGVIRAERYNIEPSLYCPFFSLGACMEGLNI 392
Query: 372 IYQELLGLAFHHEEGASA--WHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGHAACFG 429
+ LLG++ + E+ A W EDVR + G ++G Y D + R K F
Sbjct: 393 LLNRLLGISLYAEQPAKGEVWSEDVRKLAVVHESEG-LLGYIYCDFFQRADKPHQDCHFT 451
Query: 430 LQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFA 489
++ G L++DG Q+ + ++ N + + +P+LL +E FHE GH MH + + +
Sbjct: 452 IRGGRLKEDGDYQLPVVVLMLNLPRSSRSSPTLLTPGMMENLFHEMGHAMHSMLGRTRYQ 511
Query: 490 MFSGTHVERDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGL 549
+GT DF E PS ++E + + + + +RHY+TG +P+ ++ +L ES++
Sbjct: 512 HVTGTRCPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAA 571
Query: 550 FNLRQIVLAKVDQALHTQTD-ADPAEEYARLCQE-ILGVPATPGTNMPATFGHLAGGYDA 607
Q+ A +DQ H + + + + QE G+P P T F HL GY A
Sbjct: 572 DMQLQVFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLV-GYGA 630
Query: 608 QYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRRFLGRDPK 667
+YY YL S + ++ F Q+ N G YR +L GG + M+ L + P
Sbjct: 631 RYYSYLMSRAVASMVWKECFLQD-PFNRAAGERYRREMLAHGGGREPMLMVEGMLQKCPS 689
Query: 668 QDAFL 672
D F+
Sbjct: 690 VDDFV 694
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 39.7 bits (91), Expect = 0.009
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 43/242 (17%)
Query: 100 EADKKLSEFDVEMSMREDVYQRIVWLQEK-VQKDSLRPEAARYLERLIKLGRRNGLHLPR 158
E +K+ F E +E++ + I WL+E+ V++D+ E L ++ H+
Sbjct: 1075 ELKQKILLFGCE---KEEMNKEITWLKEEGVKQDTTLNELQEQL-------KQKSAHVNS 1124
Query: 159 ETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVT 218
Q+ K +K L L +D NK+L E+ TFL L EL L E+ + ++ KLK T
Sbjct: 1125 LAQDETK-LKAHLEKLEVDLNKSLKEN-TFLQEQLVELKMLAEEDKRKVSEL-TSKLKTT 1181
Query: 219 LKYPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCAI----------------LKELVTL 262
F LK H + +++ + E AI EL+ +
Sbjct: 1182 ---DEEFQSLKSSHEKSNKSLEDKSLEFKKLSEELAIQLDICCKKTEALLEAKTNELINI 1238
Query: 263 RAQKSR-LLGFHTHADY----VLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELK 317
+ K+ +L +H + V E + KT + EL +L+ L E++ + + +
Sbjct: 1239 SSSKTNAILSRISHCQHRTTKVKEALLIKTCT-----VSELEAQLRQLTEEQNTLNISFQ 1293
Query: 318 RA 319
+A
Sbjct: 1294 QA 1295
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 38.1 bits (87), Expect = 0.027
Identities = 71/362 (19%), Positives = 138/362 (38%), Gaps = 64/362 (17%)
Query: 31 QQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVSP 90
+QI+ + +E E+ K D + Q F+DV E QR +L+
Sbjct: 973 EQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEER-------------QRMLLE------- 1012
Query: 91 SKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWL--QEKVQKDSLRPEAARY------- 141
K + + +K++ E+ +D ++ L E V D L+ E AR
Sbjct: 1013 -KSFELKTQDYEKQIQSLKEEIKALKDEKMQLQHLVEGEHVTSDGLKAEVARLSKQVKTI 1071
Query: 142 --LERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGL 199
E+ I+L + + + + Q + +++K+S + ++ + + ++++L L
Sbjct: 1072 SEFEKEIELLQAQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSVEDLEHL 1131
Query: 200 PEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCRC----------- 248
ED L +G K T +F K C+ E EA N +
Sbjct: 1132 NED--GELWFAYEGLKKATRVLESHFQSQKDCYEKEI-----EALNFKVVHLSQEINHLQ 1184
Query: 249 ---KEENC---AILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKL 302
+EEN +I E+ L ++ + F + K Q + L+E A+K+
Sbjct: 1185 KLFREENDINESIRHEVTRLTSENMMIPDFKQQIS-----ELEKQKQDLEIRLNEQAEKM 1239
Query: 303 K-PLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFP 361
K L E + + +R+ L I + +++++E + D LK+ F
Sbjct: 1240 KGKLEELSNQLHRSQEEEGTQRKALEAQNEIHTKEKEKLIDKIQEMQEASDH--LKKQFE 1297
Query: 362 VQ 363
+
Sbjct: 1298 TE 1299
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 37.0 bits (84), Expect = 0.061
Identities = 74/361 (20%), Positives = 149/361 (41%), Gaps = 41/361 (11%)
Query: 35 ERTRELIE-QTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVSPSKD 93
+ R++IE Q K + + E + E ++ D+ R++ + +
Sbjct: 135 QENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSA 194
Query: 94 IRTASTEADKKLSEFDVEMSMREDVYQRIVWLQE-KVQKDSLRPEAARYLERLIKLGRRN 152
+T E +++ + V M + ++ + I +E +VQ ++ R E + +K
Sbjct: 195 EKTKKYEYEREETR-QVYMDLNNNIEKMITAFEELRVQAENSRLE----MHFKLKEDYEK 249
Query: 153 GLHLPRETQENIKRIKKKLSLLCIDFNKNLN--EDTTFLPFTLQELGGLPEDFLNSLE-- 208
HL +E ++ I +K++SLL I + N +D TFL L+E D +N LE
Sbjct: 250 IQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL---LEE----SRDKVNQLEEK 302
Query: 209 -KMEDGKLKVTLKYPHYFPL-LKKCHVP-----ETRRKVEEAFNCRCKEENCAILKELVT 261
K++ LK +++ H+ L+ V T++ +EE K C + +E T
Sbjct: 303 TKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATK-TICQLTEEKET 361
Query: 262 LRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAEC 321
+ ++ H+ E + + + T Q+L+ +Q + + +EL++
Sbjct: 362 QMEESNKARAAHSFVVTEFETTVCSLEELLRT----EQQRLEKNEDQLKILTMELQKKSS 417
Query: 322 ---ERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLG 378
E L + + +++ + + E LL E + + L G QEL+G
Sbjct: 418 ELEEMTKLTNNKEVELEELKKVLGEKE--------TLLYENKQFEKIAEELKGTEQELIG 469
Query: 379 L 379
L
Sbjct: 470 L 470
>gi|157364947 ecotropic viral integration site 1 isoform a [Homo
sapiens]
Length = 1115
Score = 35.4 bits (80), Expect = 0.18
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 25/189 (13%)
Query: 63 STLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTE----ADKKLSEFDVEMSMREDV 118
S +K L+ E T Q ++ PQ + ++DI A ++ D K E E S E
Sbjct: 386 SPVKGLSSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERP 445
Query: 119 YQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRET-QENIKRIKKKLS----L 173
+++I E D + + LE + + +E +EN K K K+S L
Sbjct: 446 FEKISDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVSPLQNL 505
Query: 174 LCIDFNKNLNEDTTFLPF-------------TLQELGGLPEDFLNS--LEKMEDGKLKVT 218
I+ K + + F P +++ + + E + S L ++D K+
Sbjct: 506 ASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVG-A 564
Query: 219 LKYPHYFPL 227
L YP FPL
Sbjct: 565 LPYPSMFPL 573
>gi|157364945 ecotropic viral integration site 1 isoform b [Homo
sapiens]
Length = 1051
Score = 35.4 bits (80), Expect = 0.18
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 25/189 (13%)
Query: 63 STLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTE----ADKKLSEFDVEMSMREDV 118
S +K L+ E T Q ++ PQ + ++DI A ++ D K E E S E
Sbjct: 322 SPVKGLSSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERP 381
Query: 119 YQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRET-QENIKRIKKKLS----L 173
+++I E D + + LE + + +E +EN K K K+S L
Sbjct: 382 FEKISDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVSPLQNL 441
Query: 174 LCIDFNKNLNEDTTFLPF-------------TLQELGGLPEDFLNS--LEKMEDGKLKVT 218
I+ K + + F P +++ + + E + S L ++D K+
Sbjct: 442 ASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVG-A 500
Query: 219 LKYPHYFPL 227
L YP FPL
Sbjct: 501 LPYPSMFPL 509
>gi|157364943 ecotropic viral integration site 1 isoform b [Homo
sapiens]
Length = 1051
Score = 35.4 bits (80), Expect = 0.18
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 25/189 (13%)
Query: 63 STLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTE----ADKKLSEFDVEMSMREDV 118
S +K L+ E T Q ++ PQ + ++DI A ++ D K E E S E
Sbjct: 322 SPVKGLSSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERP 381
Query: 119 YQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRET-QENIKRIKKKLS----L 173
+++I E D + + LE + + +E +EN K K K+S L
Sbjct: 382 FEKISDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVSPLQNL 441
Query: 174 LCIDFNKNLNEDTTFLPF-------------TLQELGGLPEDFLNS--LEKMEDGKLKVT 218
I+ K + + F P +++ + + E + S L ++D K+
Sbjct: 442 ASINNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVG-A 500
Query: 219 LKYPHYFPL 227
L YP FPL
Sbjct: 501 LPYPSMFPL 509
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 32.7 bits (73), Expect = 1.2
Identities = 85/347 (24%), Positives = 136/347 (39%), Gaps = 57/347 (16%)
Query: 5 AACAGDMADAASPCSVVNDLRWDLSAQQIE----ERTRELIE-QTKRVYDQVGTQEFE-- 57
A + D ++ DL+ +++ Q E + E +E + K D + E E
Sbjct: 608 AILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKN 667
Query: 58 ----DVSYESTLKALA-----DVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEF 108
D++Y+ LK+L +V + + D Q + +K + A E +KKL E
Sbjct: 668 NLEIDLNYK--LKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSV--AMCEMEKKLKE- 722
Query: 109 DVEMSMREDVYQRIVWLQEKVQK-DSLRPEAARYLERLIKLGRR-----NGLHLPRETQE 162
E RE R+V ++++ D ++ + LE L R L L E QE
Sbjct: 723 --EREAREKAENRVVQIEKQCSMLDVDLKQSQQKLEHLTGNKERMEDEVKNLTLQLE-QE 779
Query: 163 NIKRI----KKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDG----- 213
+ KR+ + K D K L + TL E L E L L K G
Sbjct: 780 SNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQM 839
Query: 214 -KLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGF 272
+L+ L+ YF L K V E + ++E E+N LK++ L+ +K L
Sbjct: 840 RELQDQLEAEQYFSTLYKTQVKELKEEIE--------EKNRENLKKIQELQNEKETLA-- 889
Query: 273 HTHADYVLEMNMAKTSQTVATFLD----ELAQKLKPLGEQERAVILE 315
T D L A++ Q L+ EL Q+ K + R I +
Sbjct: 890 -TQLD--LAETKAESEQLARGLLEEQYFELTQESKKAASRNRQEITD 933
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 541 ESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATP 590
E+ + NL++IV KV AL +Q + +EYA+ CQ+ + + P
Sbjct: 2532 ETEMLQKKIVNLQKIVEEKVAAALVSQIQLEAVQEYAKFCQDNQTISSEP 2581
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 32.7 bits (73), Expect = 1.2
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 541 ESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEYARLCQEILGVPATP 590
E+ + NL++IV KV AL +Q + +EYA+ CQ+ + + P
Sbjct: 2524 ETEMLQKKIVNLQKIVEEKVAAALVSQIQLEAVQEYAKFCQDNQTISSEP 2573
>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
Length = 1726
Score = 32.7 bits (73), Expect = 1.2
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 13/209 (6%)
Query: 8 AGDMADAASPCSVVNDLRWDLS-AQQIEERTRELIEQTKRV-YDQVGTQEFEDVSYESTL 65
AG+ DA V + +L QQ+ EL++ + Y E E Y L
Sbjct: 851 AGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVL 910
Query: 66 KALADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWL 125
+ V + +Q +++F Q S +DI L E V+ + +Y +
Sbjct: 911 RQA--VSLARRIQDPLIEFAQVCSSDEDILCLKFHP---LQEHVVKEELLNALYCEFINR 965
Query: 126 QEKVQKDSLRPEAARYLERLIK----LGRRNGLHLPRETQENIKRIKKKLSL--LCIDFN 179
+V D R A Y + LI+ LG R G HL + ++N R++ + L +C
Sbjct: 966 VNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGP 1025
Query: 180 KNLNEDTTFLPFTLQELGGLPEDFLNSLE 208
K FL LG + ++ L+
Sbjct: 1026 KVFMNCAGFLKIDTASLGDSTDSYIEVLD 1054
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 32.3 bits (72), Expect = 1.5
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 69 ADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEK 128
A +++ YT+Q + ++ + + + TEA++ L + M ED+Y + + E
Sbjct: 3325 AKLQLQYTLQELV---SKNSAMKEAFKAQETEAERYLENYKCYRKMEEDIYTNLSKM-ET 3380
Query: 129 VQKDSLRPEAARYLERLIKLGRRNGLHLPR-ETQENIKRIKKKLSLLCIDFNKNLNEDTT 187
V S+ Y E L +L + L T+E + ++++ L LL + +N D
Sbjct: 3381 VLGQSMSSLPLSYREALERLEQSKALVSNLISTKEELMKLRQILRLLRLRCTEN---DGI 3437
Query: 188 FLPFTLQELGGLPEDFLNSLEKMED-----GKLKVTLKY---------------PHYFPL 227
L L+ + L E +L+ LE ++ +LK K+ P
Sbjct: 3438 CL---LKIVSALWEKWLSLLEAAKEWEMWCEELKQEWKFVSEEIEREAIILDNLQEELPE 3494
Query: 228 LKKCHVPETRRKVEEAFNCRCK-EENCAILKELVTLRAQKSR 268
+ K T ++ E +C C+ EN + L+TL Q+ R
Sbjct: 3495 ISKTKEAATTEELSELLDCLCQYGENVEKQQLLLTLLLQRIR 3536
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 32.3 bits (72), Expect = 1.5
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 32/222 (14%)
Query: 69 ADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEK 128
A +++ YT+Q + ++ + + + TEA++ L + M ED+Y + + E
Sbjct: 3325 AKLQLQYTLQELV---SKNSAMKEAFKAQETEAERYLENYKCYRKMEEDIYTNLSKM-ET 3380
Query: 129 VQKDSLRPEAARYLERLIKLGRRNGLHLPR-ETQENIKRIKKKLSLLCIDFNKNLNEDTT 187
V S+ Y E L +L + L T+E + ++++ L LL + +N D
Sbjct: 3381 VLGQSMSSLPLSYREALERLEQSKALVSNLISTKEELMKLRQILRLLRLRCTEN---DGI 3437
Query: 188 FLPFTLQELGGLPEDFLNSLEKMED-----GKLKVTLKY---------------PHYFPL 227
L L+ + L E +L+ LE ++ +LK K+ P
Sbjct: 3438 CL---LKIVSALWEKWLSLLEAAKEWEMWCEELKQEWKFVSEEIEREAIILDNLQEELPE 3494
Query: 228 LKKCHVPETRRKVEEAFNCRCK-EENCAILKELVTLRAQKSR 268
+ K T ++ E +C C+ EN + L+TL Q+ R
Sbjct: 3495 ISKTKEAATTEELSELLDCLCQYGENVEKQQLLLTLLLQRIR 3536
>gi|20070228 nucleobindin 1 [Homo sapiens]
Length = 461
Score = 32.3 bits (72), Expect = 1.5
Identities = 68/317 (21%), Positives = 125/317 (39%), Gaps = 40/317 (12%)
Query: 37 TRELIEQTKRVYDQVGTQEFEDVS-YESTLKALADVEVTYTVQ---RNILDFPQHVSP-- 90
+REL + V ++ + ++VS LKA D E VQ N+L +H+ P
Sbjct: 86 SRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAEQDPNVQVDHLNLLKQFEHLDPQN 145
Query: 91 -----SKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERL 145
++D+ A + L+++D Y+ + + + +SL E + ER
Sbjct: 146 QHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRRYLESLGEEQRKEAERK 205
Query: 146 IKLGRRNGLHLPR----ETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPE 201
++ +R P+ +Q +K + ++L L D N+ N T F+ + G L E
Sbjct: 206 LEEQQRRHREHPKVNVPGSQAQLKEVWEELDGL--DPNR-FNPKTFFILHDINSDGVLDE 262
Query: 202 D-----FLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCAIL 256
F LEK+ D K + +++ R + N ++ L
Sbjct: 263 QELEALFTKELEKVYDPK--------NEEDDMREMEEERLRMREHVMKNVDTNQDRLVTL 314
Query: 257 KELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELA-------QKLKPLGEQE 309
+E + +K G +EM+ A T + + F +ELA K + L ++
Sbjct: 315 EEFLASTQRKE--FGDTGEGWETVEMHPAYTEEELRRFEEELAAREAELNAKAQRLSQET 372
Query: 310 RAVILELKRAECERRGL 326
A+ R E ++R L
Sbjct: 373 EALGRSQGRLEAQKREL 389
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 32.0 bits (71), Expect = 2.0
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 38/152 (25%)
Query: 29 SAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHV 88
S + EE++++L + + + G E E V L+DV T + N L
Sbjct: 154 SLRYFEEKSKDLAVRLQHSLQRKG--ELESV--------LSDVMATQKKKANQLS----- 198
Query: 89 SPSKDIRTASTEADKKLSEFDVEMSMREDVYQRI-----------VWLQEKVQKDSLRPE 137
SPSK A TE + +E SMRE+ ++ V L+ + L+ E
Sbjct: 199 SPSK----AGTE-------WKLEQSMREEALLKVQLTQLKESFQQVQLERDEYSEHLKGE 247
Query: 138 AARYLERLIKLGRRNGLHLPRETQENIKRIKK 169
AR+ +R+ K+ + L +E Q++++R++K
Sbjct: 248 RARWQQRMRKMSQEI-CTLKKEKQQDMRRVEK 278
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 32.0 bits (71), Expect = 2.0
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 38/152 (25%)
Query: 29 SAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHV 88
S + EE++++L + + + G E E V L+DV T + N L
Sbjct: 155 SLRYFEEKSKDLAVRLQHSLQRKG--ELESV--------LSDVMATQKKKANQLS----- 199
Query: 89 SPSKDIRTASTEADKKLSEFDVEMSMREDVYQRI-----------VWLQEKVQKDSLRPE 137
SPSK A TE + +E SMRE+ ++ V L+ + L+ E
Sbjct: 200 SPSK----AGTE-------WKLEQSMREEALLKVQLTQLKESFQQVQLERDEYSEHLKGE 248
Query: 138 AARYLERLIKLGRRNGLHLPRETQENIKRIKK 169
AR+ +R+ K+ + L +E Q++++R++K
Sbjct: 249 RARWQQRMRKMSQEI-CTLKKEKQQDMRRVEK 279
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 32.0 bits (71), Expect = 2.0
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 111 EMSMREDVYQRIVWLQEKVQ------KDSLRPEAARYLERLIKLGRRNGLHLPRETQENI 164
E MRE+ QR+ WL+ +VQ +D +R E L++L R L ++ +
Sbjct: 659 EARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKL-----REELESQQKAERAS 713
Query: 165 KRIKKKLSLLCIDFNKNLNEDTTFLPFTLQ-ELGGLPEDFLNSLEKMEDGKLK---VTLK 220
K + L + L E+ + Q L E L L + +G+ K TL+
Sbjct: 714 LEQKNRQML------EQLKEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLE 767
Query: 221 YPHYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVL 280
H L + C E + + E + K+ A KE AQ + LG H +
Sbjct: 768 KEHSAELERLCSSLEAKHR--EVVSSLQKKIQEAQQKE----EAQLQKCLGQVEHRVHQK 821
Query: 281 EMNMAKTSQTVATFLDELAQKLKPLGEQER 310
++A +++ L E Q+++ GE ER
Sbjct: 822 SYHVAGYEHELSSLLREKRQEVE--GEHER 849
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 32.0 bits (71), Expect = 2.0
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 66/340 (19%)
Query: 31 QQIEERTRELIEQTKRVYDQVGTQE-------FEDVSYESTLKALADVEVTYTVQRNILD 83
QQ++ +++ +Q + +Q+ +E E V+ E+ +K L D + Q N L
Sbjct: 939 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 998
Query: 84 FPQHVSPSK--DIRTASTEADKK--------------LSEFDVEMSMREDVYQRIVWLQE 127
+ + + D+ T E ++K +SE +V + E Q + L+
Sbjct: 999 KERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKR 1058
Query: 128 KVQKDS---------LRPEAARYLERLIK----------------LGRRNGLHLPRETQE 162
K++ D+ L+ + A +L K + N L RE +
Sbjct: 1059 KLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEG 1118
Query: 163 NIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYP 222
+I +++ L NK + L L+ L ED L+S ++ + K
Sbjct: 1119 HISDLQEDLDSERAARNK-AEKQKRDLGEELEALKTELEDTLDSTATQQE----LRAKRE 1173
Query: 223 HYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEM 282
+LKK ETR EA ++++ ++EL Q R +
Sbjct: 1174 QEVTVLKKALDEETRS--HEAQVQEMRQKHAQAVEELTEQLEQFKRA-----------KA 1220
Query: 283 NMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECE 322
N+ K QT+ +LA +L+ LG+ ++ V + K+ E +
Sbjct: 1221 NLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQ 1260
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 32.0 bits (71), Expect = 2.0
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 66/340 (19%)
Query: 31 QQIEERTRELIEQTKRVYDQVGTQE-------FEDVSYESTLKALADVEVTYTVQRNILD 83
QQ++ +++ +Q + +Q+ +E E V+ E+ +K L D + Q N L
Sbjct: 946 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 1005
Query: 84 FPQHVSPSK--DIRTASTEADKK--------------LSEFDVEMSMREDVYQRIVWLQE 127
+ + + D+ T E ++K +SE +V + E Q + L+
Sbjct: 1006 KERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKR 1065
Query: 128 KVQKDS---------LRPEAARYLERLIK----------------LGRRNGLHLPRETQE 162
K++ D+ L+ + A +L K + N L RE +
Sbjct: 1066 KLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEG 1125
Query: 163 NIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYP 222
+I +++ L NK + L L+ L ED L+S ++ + K
Sbjct: 1126 HISDLQEDLDSERAARNK-AEKQKRDLGEELEALKTELEDTLDSTATQQE----LRAKRE 1180
Query: 223 HYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEM 282
+LKK ETR EA ++++ ++EL Q R +
Sbjct: 1181 QEVTVLKKALDEETRS--HEAQVQEMRQKHAQAVEELTEQLEQFKRA-----------KA 1227
Query: 283 NMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECE 322
N+ K QT+ +LA +L+ LG+ ++ V + K+ E +
Sbjct: 1228 NLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQ 1267
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 32.0 bits (71), Expect = 2.0
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 66/340 (19%)
Query: 31 QQIEERTRELIEQTKRVYDQVGTQE-------FEDVSYESTLKALADVEVTYTVQRNILD 83
QQ++ +++ +Q + +Q+ +E E V+ E+ +K L D + Q N L
Sbjct: 946 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 1005
Query: 84 FPQHVSPSK--DIRTASTEADKK--------------LSEFDVEMSMREDVYQRIVWLQE 127
+ + + D+ T E ++K +SE +V + E Q + L+
Sbjct: 1006 KERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKR 1065
Query: 128 KVQKDS---------LRPEAARYLERLIK----------------LGRRNGLHLPRETQE 162
K++ D+ L+ + A +L K + N L RE +
Sbjct: 1066 KLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEG 1125
Query: 163 NIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYP 222
+I +++ L NK + L L+ L ED L+S ++ + K
Sbjct: 1126 HISDLQEDLDSERAARNK-AEKQKRDLGEELEALKTELEDTLDSTATQQE----LRAKRE 1180
Query: 223 HYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEM 282
+LKK ETR EA ++++ ++EL Q R +
Sbjct: 1181 QEVTVLKKALDEETRS--HEAQVQEMRQKHAQAVEELTEQLEQFKRA-----------KA 1227
Query: 283 NMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECE 322
N+ K QT+ +LA +L+ LG+ ++ V + K+ E +
Sbjct: 1228 NLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQ 1267
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 32.0 bits (71), Expect = 2.0
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 66/340 (19%)
Query: 31 QQIEERTRELIEQTKRVYDQVGTQE-------FEDVSYESTLKALADVEVTYTVQRNILD 83
QQ++ +++ +Q + +Q+ +E E V+ E+ +K L D + Q N L
Sbjct: 939 QQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLS 998
Query: 84 FPQHVSPSK--DIRTASTEADKK--------------LSEFDVEMSMREDVYQRIVWLQE 127
+ + + D+ T E ++K +SE +V + E Q + L+
Sbjct: 999 KERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKR 1058
Query: 128 KVQKDS---------LRPEAARYLERLIK----------------LGRRNGLHLPRETQE 162
K++ D+ L+ + A +L K + N L RE +
Sbjct: 1059 KLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEG 1118
Query: 163 NIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYP 222
+I +++ L NK + L L+ L ED L+S ++ + K
Sbjct: 1119 HISDLQEDLDSERAARNK-AEKQKRDLGEELEALKTELEDTLDSTATQQE----LRAKRE 1173
Query: 223 HYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLEM 282
+LKK ETR EA ++++ ++EL Q R +
Sbjct: 1174 QEVTVLKKALDEETRS--HEAQVQEMRQKHAQAVEELTEQLEQFKRA-----------KA 1220
Query: 283 NMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECE 322
N+ K QT+ +LA +L+ LG+ ++ V + K+ E +
Sbjct: 1221 NLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQ 1260
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 31.6 bits (70), Expect = 2.6
Identities = 30/146 (20%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 26 WDLSAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFP 85
W+ Q+ EE+ RE E+ + +++ Q E++ +E K E+ + + +
Sbjct: 312 WEEKIQEQEEKIREQEEKIREQEEKMRRQ--EEMMWEKEEKMRRQEEMMWEKEEKM---- 365
Query: 86 QHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERL 145
+ + E ++K+ E + +M +E + ++ +EK Q++ E + E+
Sbjct: 366 ------RRLEEMMWEKEEKIRELEEKMHEQEKIREQ----EEKRQEEEKIREQEKRQEQE 415
Query: 146 IKLGRRNGLHLPRETQENIKRIKKKL 171
K+ R+ RE +E I+ +KK+
Sbjct: 416 AKMWRQE--EKIREQEEKIREQEKKM 439
>gi|122939208 nuclear antigen Sp100 isoform 1 [Homo sapiens]
Length = 885
Score = 31.6 bits (70), Expect = 2.6
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 81 ILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSM-------------------------- 114
++ FP+ V S++ RT S++A + DVE +
Sbjct: 491 VMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGR 550
Query: 115 REDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLL 174
++D ++ + L KVQK + + R +K R+ G +P++ ENI + +L +
Sbjct: 551 KKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKD--ENINFKQSELPVT 608
Query: 175 C 175
C
Sbjct: 609 C 609
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 31.6 bits (70), Expect = 2.6
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 81 ILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSM-------------------------- 114
++ FP+ V S++ RT S++A + DVE +
Sbjct: 491 VMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGR 550
Query: 115 REDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLL 174
++D ++ + L KVQK + + R +K R+ G +P++ ENI + +L +
Sbjct: 551 KKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKD--ENINFKQSELPVT 608
Query: 175 C 175
C
Sbjct: 609 C 609
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 31.2 bits (69), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 30 AQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVS 89
A Q+E R +E+ +R + ++EFE + + AL E+ + + V
Sbjct: 266 APQVEAGKR--LEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER-----RKVL 318
Query: 90 PSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQK 131
++ R EAD+KL E + + ++E++ +R EK QK
Sbjct: 319 EEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQK 360
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 31.2 bits (69), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 30 AQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVS 89
A Q+E R +E+ +R + ++EFE + + AL E+ + + V
Sbjct: 292 APQVEAGKR--LEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER-----RKVL 344
Query: 90 PSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQK 131
++ R EAD+KL E + + ++E++ +R EK QK
Sbjct: 345 EEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQK 386
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 31.2 bits (69), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 30 AQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVS 89
A Q+E R +E+ +R + ++EFE + + AL E+ + + V
Sbjct: 298 APQVEAGKR--LEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER-----RKVL 350
Query: 90 PSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQK 131
++ R EAD+KL E + + ++E++ +R EK QK
Sbjct: 351 EEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQK 392
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 31.2 bits (69), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 30 AQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVS 89
A Q+E R +E+ +R + ++EFE + + AL E+ + + V
Sbjct: 272 APQVEAGKR--LEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER-----RKVL 324
Query: 90 PSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQK 131
++ R EAD+KL E + + ++E++ +R EK QK
Sbjct: 325 EEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQK 366
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,963,383
Number of Sequences: 37866
Number of extensions: 1217444
Number of successful extensions: 3272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 3226
Number of HSP's gapped (non-prelim): 85
length of query: 689
length of database: 18,247,518
effective HSP length: 109
effective length of query: 580
effective length of database: 14,120,124
effective search space: 8189671920
effective search space used: 8189671920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.