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Search of human proteins with 4507145
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507145 sorting nexin 4 [Homo sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507145 sorting nexin 4 [Homo sapiens] 907 0.0
gi|153791707 sorting nexin family member 30 [Homo sapiens] 107 3e-23
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 96 5e-20
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 93 4e-19
gi|23111038 sorting nexin 2 [Homo sapiens] 69 7e-12
gi|23943858 sorting nexin 8 [Homo sapiens] 62 1e-09
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 55 1e-07
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 55 1e-07
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 55 1e-07
gi|4507143 sorting nexin 3 isoform a [Homo sapiens] 53 5e-07
gi|23111030 sorting nexin 12 [Homo sapiens] 52 1e-06
gi|23111032 sorting nexin 1 isoform b [Homo sapiens] 51 2e-06
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 46 8e-05
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 45 1e-04
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 45 1e-04
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 45 1e-04
gi|23397574 sorting nexin 33 [Homo sapiens] 45 1e-04
gi|23111026 sorting nexin 11 [Homo sapiens] 44 4e-04
gi|23111028 sorting nexin 11 [Homo sapiens] 44 4e-04
gi|23111041 sorting nexin 3 isoform b [Homo sapiens] 43 7e-04
gi|23111023 sorting nexin 10 [Homo sapiens] 43 7e-04
gi|23238244 sorting nexin 16 isoform a [Homo sapiens] 42 0.001
gi|23238246 sorting nexin 16 isoform a [Homo sapiens] 42 0.001
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 42 0.001
gi|7706706 sorting nexin 9 [Homo sapiens] 41 0.003
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 40 0.004
gi|38708169 sorting nexin 25 [Homo sapiens] 39 0.007
gi|154091028 sorting nexin 29 [Homo sapiens] 37 0.037
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 37 0.048
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 37 0.048
>gi|4507145 sorting nexin 4 [Homo sapiens]
Length = 450
Score = 907 bits (2344), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MEQAPPDPERQLQPAPLEPLGSPDAGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEI 60
MEQAPPDPERQLQPAPLEPLGSPDAGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEI
Sbjct: 1 MEQAPPDPERQLQPAPLEPLGSPDAGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEI 60
Query: 61 SVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVY 120
SVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVY
Sbjct: 61 SVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVY 120
Query: 121 YPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLF 180
YPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLF
Sbjct: 121 YPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLF 180
Query: 181 LTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRV 240
LTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRV
Sbjct: 181 LTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRV 240
Query: 241 RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY 300
RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY
Sbjct: 241 RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY 300
Query: 301 ADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTT 360
ADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTT
Sbjct: 301 ADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTT 360
Query: 361 KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE 420
KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE
Sbjct: 361 KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE 420
Query: 421 ALISYAVMQISMCKKGIQVWTNAKECFSKM 450
ALISYAVMQISMCKKGIQVWTNAKECFSKM
Sbjct: 421 ALISYAVMQISMCKKGIQVWTNAKECFSKM 450
>gi|153791707 sorting nexin family member 30 [Homo sapiens]
Length = 437
Score = 107 bits (266), Expect = 3e-23
Identities = 88/365 (24%), Positives = 163/365 (44%), Gaps = 49/365 (13%)
Query: 78 ETYTAYLIETRSVEHTDGQSVLTD-SLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEF 136
ETY Y I T+S T + L + S+ RRY +F+ LRS L P ++PPLPEK F
Sbjct: 106 ETYITYRITTKS---TRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEK---F 159
Query: 137 VWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGF 196
V K D +FVE RR L+ FL RI HP+L ++ F +FLT +
Sbjct: 160 VV-KGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLTAKDLNAYKKQGIAL 218
Query: 197 QLKADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHG 256
+ +K + ++++ F + Y D + + R+ R+
Sbjct: 219 LTRMGESVKHVTGGYKLRTRPLEFAAIGDYLDTFALKLGTIDRIAQRIIKEEIEYLVELR 278
Query: 257 NYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILED-EEHYADQLKEYLFYAEALR 315
YG V+S WSA+E E+ + L+ + +++++++ +D E + L+EY+ Y+++++
Sbjct: 279 EYGPVYSTWSALEGELAEPLEGVSACIGNCSTALEELTDDMTEDFLPVLREYILYSDSMK 338
Query: 316 AVCRKHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARI 375
+V +K + +Q + E + +A +K+ ++ A +
Sbjct: 339 SVLKKRDQVQAEYEAKLEAVALRKEDRPKV--------------------------PADV 372
Query: 376 KVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKEALISYAVMQISMCKK 435
+ ++++ LK AD+ER++ K +D ++ L+ A I +K
Sbjct: 373 EKCQDRMECFNADLK--------------ADMERWQNNKRQDFRQLLMGMADKNIQYYEK 418
Query: 436 GIQVW 440
+ W
Sbjct: 419 CLMAW 423
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 96.3 bits (238), Expect = 5e-20
Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 57/391 (14%)
Query: 55 LKKIEISVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLR 114
LK + I+V E E + ET+ Y I T++ S + RRY +F L+
Sbjct: 93 LKDLFITVDEPESH-----VTTIETFITYRIITKTSRGEFDSSEF--EVRRRYQDFLWLK 145
Query: 115 SYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRD 174
L +P +++PPLPEK F+ K + + DF+E RR L FL RIA HP L +
Sbjct: 146 GKLEEAHPTLIIPPLPEK---FIV-KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFN 201
Query: 175 KIFYLFLTQEGNWKETVNE---TGFQLKADSRLKALNATFR-VKNPDKRFTDLKHYSDEL 230
+ F +FLT + W+ + ++ G + ++A+ ++ R VKN + F ++ ++ +
Sbjct: 202 EDFKIFLTAQA-WELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELF 260
Query: 231 QSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSI 290
I+ + ++ R+ + YG + WSA E+++ D L+ +D +
Sbjct: 261 SQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKAT 320
Query: 291 DDILED-EEHYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELVTGT 349
+ + E + EY+ Y+E L V ++ + +Q +L+ + L KK + L
Sbjct: 321 EKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLL---- 376
Query: 350 VRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIER 409
PE+ I LE+++ LK AD ER
Sbjct: 377 ------------------PEE----IGKLEDKVECANNALK--------------ADWER 400
Query: 410 FKEQKNRDLKEALISYAVMQISMCKKGIQVW 440
+K+ D+K A A I ++ + W
Sbjct: 401 WKQNMQNDIKLAFTDMAEENIHYYEQCLATW 431
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 93.2 bits (230), Expect = 4e-19
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 17/290 (5%)
Query: 55 LKKIEISVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLR 114
LK + I+V E E + ET+ Y I T++ S + RRY +F L+
Sbjct: 29 LKDLFITVDEPESH-----VTTIETFITYRIITKTSRGEFDSSEF--EVRRRYQDFLWLK 81
Query: 115 SYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRD 174
L +P +++PPLPEK F+ K + + DF+E RR L FL RIA HP L +
Sbjct: 82 GKLEEAHPTLIIPPLPEK---FIV-KGMVERFNDDFIETRRKALHKFLNRIADHPTLTFN 137
Query: 175 KIFYLFLTQEGNWKETVNE---TGFQLKADSRLKALNATFR-VKNPDKRFTDLKHYSDEL 230
+ F +FLT + W+ + ++ G + ++A+ ++ R VKN + F ++ ++ +
Sbjct: 138 EDFKIFLTAQA-WELSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELF 196
Query: 231 QSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSI 290
I+ + ++ R+ + YG + WSA E+++ D L+ +D +
Sbjct: 197 SQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKAT 256
Query: 291 DDILED-EEHYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKK 339
+ + E + EY+ Y+E L V ++ + +Q +L+ + L KK
Sbjct: 257 EKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKK 306
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 69.3 bits (168), Expect = 7e-12
Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 70/410 (17%)
Query: 58 IEISVSEAEK-RTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSY 116
IEI VS+ EK G NA Y AY + T++ +S S+ RR+S+F L S
Sbjct: 142 IEIGVSDPEKVGDGMNA------YMAYRVTTKTSLSMFSKSEF--SVKRRFSDFLGLHSK 193
Query: 117 LLVYYPHI--VVPPLPEKRAEFVWHKL--SADNMDPDFVERRRIGLENFLLRIASHPILC 172
L Y H+ +VPP PEK + D+ +FVE+RR LE +L R HP L
Sbjct: 194 LASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLL 253
Query: 173 RDKIFYLFLTQEGNWKETVNE-----TGFQLKADSRLKALN-ATFRVKNPDKRFTDLKHY 226
+D FL + VN G + A+N T ++ D F + +
Sbjct: 254 QDPDLRQFL-ESSELPRAVNTQALSGAGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQ 312
Query: 227 SDELQSVISHL-LRVRARVADR---------------LYGVYKVHGNYGRVFSEWSAIEK 270
+ L + L + V A V R + G + H R S+ + +E+
Sbjct: 313 FENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEE 372
Query: 271 EMGDGLQSAGHHMDVYASSIDDILEDEEHYADQLKEYLFYAEALRAVCRKHELMQYDLEM 330
++ D L D Y +++ L +Y+ A++ V H + +
Sbjct: 373 KI-DQLHQEQAFADFYM------------FSELLSDYIRLIAAVKGVF-DHRMKCWQKWE 418
Query: 331 AAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLK 390
AQ KK++ E K+ P+ +I+ + +I E E +++
Sbjct: 419 DAQITLLKKREAE----------------AKMMVANKPD----KIQQAKNEIREWEAKVQ 458
Query: 391 SKNLEGREFVKNAWADIERFKEQKNRDLKEALISYAVMQISMCKKGIQVW 440
+ + K ++ RF++++ +D K +I Y + ++ I+ W
Sbjct: 459 QGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYW 508
>gi|23943858 sorting nexin 8 [Homo sapiens]
Length = 465
Score = 61.6 bits (148), Expect = 1e-09
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 30/255 (11%)
Query: 88 RSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMD 147
+ VE+ S++RRY++F + + LL +P+ +VP LP KR L AD
Sbjct: 91 KHVEYEVSSQRFKSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRM------LGADR-- 142
Query: 148 PDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKAL 207
+F+E RR L+ F+ +A HP+ D + LFL+ G+ + + Q D L
Sbjct: 143 -EFIEARRRALKRFVNLVARHPLFSEDVVLKLFLSFSGSDVQNKLKESAQCVGDEFLNCK 201
Query: 208 NAT----FRVKNPDKRFTDLKHYSDELQSVISHLLRVRA-RVADR---------LYG-VY 252
AT F + +F + + + H LR RA R+A R ++G
Sbjct: 202 LATRAKDFLPADIQAQFAISRELIRNIYNSF-HKLRDRAERIASRAIDNAADLLIFGKEL 260
Query: 253 KVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDIL-----EDEEHYADQLKEY 307
G+ W+A+ L+ A + V + + D ++E ++L +
Sbjct: 261 SAIGSDTTPLPSWAALNSSTWGSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLF 320
Query: 308 LFYAEALRAVCRKHE 322
L ++ + +C +HE
Sbjct: 321 LDLLQSYKDLCERHE 335
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 55.1 bits (131), Expect = 1e-07
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLR 164
RRY F+ L + L +P I VP LPEK+A + DF+ +RR GL ++
Sbjct: 311 RRYKHFDWLYARLAEKFPVISVPHLPEKQA--------TGRFEEDFISKRRKGLIWWMNH 362
Query: 165 IASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLK 224
+ASHP+L + +F FLT + E + G + + N + P DL+
Sbjct: 363 MASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQ 422
Query: 225 HYSDEL 230
++
Sbjct: 423 EVESKI 428
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 55.1 bits (131), Expect = 1e-07
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLR 164
RRY F+ L + L +P I VP LPEK+A + DF+ +RR GL ++
Sbjct: 311 RRYKHFDWLYARLAEKFPVISVPHLPEKQA--------TGRFEEDFISKRRKGLIWWMNH 362
Query: 165 IASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLK 224
+ASHP+L + +F FLT + E + G + + N + P DL+
Sbjct: 363 MASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQ 422
Query: 225 HYSDEL 230
++
Sbjct: 423 EVESKI 428
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 55.1 bits (131), Expect = 1e-07
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLR 164
RRY F+ L + L +P I VP LPEK+A + DF+ +RR GL ++
Sbjct: 311 RRYKHFDWLYARLAEKFPVISVPHLPEKQA--------TGRFEEDFISKRRKGLIWWMNH 362
Query: 165 IASHPILCRDKIFYLFLTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFTDLK 224
+ASHP+L + +F FLT + E + G + + N + P DL+
Sbjct: 363 MASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQ 422
Query: 225 HYSDEL 230
++
Sbjct: 423 EVESKI 428
>gi|4507143 sorting nexin 3 isoform a [Homo sapiens]
Length = 162
Score = 53.1 bits (126), Expect = 5e-07
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNM-DPDFVERRRIGLENFLL 163
RRYS+FE LRS L +VVPPLP K D + D +F+E R+ GLE F+
Sbjct: 69 RRYSDFEWLRSEL-ERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFIN 127
Query: 164 RIASHPILCRDKIFYLFLTQE 184
++A HP+ ++ ++FL E
Sbjct: 128 KVAGHPLAQNERCLHMFLQDE 148
>gi|23111030 sorting nexin 12 [Homo sapiens]
Length = 162
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 105 RRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNM-DPDFVERRRIGLENFLL 163
RRYS+FE L++ L IVVPPLP K + + + + F+E RR GLE F+
Sbjct: 70 RRYSDFEWLKNEL-ERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFIN 128
Query: 164 RIASHPILCRDKIFYLFLTQE 184
+IA HP+ ++ ++FL +E
Sbjct: 129 KIAGHPLAQNERCLHMFLQEE 149
>gi|23111032 sorting nexin 1 isoform b [Homo sapiens]
Length = 457
Score = 51.2 bits (121), Expect = 2e-06
Identities = 108/456 (23%), Positives = 170/456 (37%), Gaps = 84/456 (18%)
Query: 18 EPLGSPDAGL-----GAAVGKEAEGAGEESSGVDTMT-------HNNFWLKKIEISVSEA 65
E L P GL GAA G E E ++ G D T H + + + ++
Sbjct: 12 ERLPPPFPGLEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPKITTSLLPINNG 71
Query: 66 EKRTGRNAMNMQE-----------TYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLR 114
K G + QE Y AY + T++ ++ RR+S+F L
Sbjct: 72 SKENGIHEEQDQEPQDLFAGDGMNAYVAYKVTTQTSLPLFRSKQF--AVKRRFSDFLGLY 129
Query: 115 SYLLVYYPH--IVVPPLPEKRAEFVWHKL--SADNMDPDFVERRRIGLENFLLRIASHPI 170
L + +VPP PEK + D+ +F+E+RR LE +L RI +HP
Sbjct: 130 EKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPT 189
Query: 171 LCRDKIFYLFLTQEGNWKETVNETGFQ-LKADSRLKALN-ATFRVKNPDKRFTDLK-HYS 227
+ +D FL +E E G Q L LK N AT V + + +
Sbjct: 190 MLQDPDVREFLEKE----ELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFE 245
Query: 228 DELQSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYA 287
++LQ V R+R +L+ V + N+ + E + + L G D A
Sbjct: 246 EKLQEVECEEQRLR-----KLHAVVETLVNHRK---ELALNTAQFAKSLAMLGSSEDNTA 297
Query: 288 SS--IDDILEDEE-----HYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQ 340
S + + E EE H ++ AE L R +++ AA D K
Sbjct: 298 LSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVR-----AAFDQRMKTW 352
Query: 341 QCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFV 400
Q + T++ ++REA ++L + QQ K + LE V
Sbjct: 353 QRWQDAQATLQ-----------------KKREAEARLLWANKPDKLQQAKDEILEWESRV 395
Query: 401 KNAWADIE-----------RFKEQKNRDLKEALISY 425
D E RF+++K++D K +I Y
Sbjct: 396 TQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKY 431
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 45.8 bits (107), Expect = 8e-05
Identities = 85/346 (24%), Positives = 134/346 (38%), Gaps = 59/346 (17%)
Query: 105 RRYSEFELLRSYLLVYYPH--IVVPPLPEKRAEFVWHKL--SADNMDPDFVERRRIGLEN 160
RR+S+F L L + +VPP PEK + D+ +F+E+RR LE
Sbjct: 185 RRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALER 244
Query: 161 FLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGFQ-LKADSRLKALN-ATFRVKNPDK 218
+L RI +HP + +D FL +E E G Q L LK N AT V
Sbjct: 245 YLQRIVNHPTMLQDPDVREFLEKE----ELPRAVGTQTLSGAGLLKMFNKATDAVSKMTI 300
Query: 219 RFTDLK-HYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQ 277
+ + + ++LQ V R+R +L+ V + N+ + E + + L
Sbjct: 301 KMNESDIWFEEKLQEVECEEQRLR-----KLHAVVETLVNHRK---ELALNTAQFAKSLA 352
Query: 278 SAGHHMDVYASS--IDDILEDEE-----HYADQLKEYLFYAEALRAVCRKHELMQYDLEM 330
G D A S + + E EE H ++ AE L R +++
Sbjct: 353 MLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVR----- 407
Query: 331 AAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLK 390
AA D K Q + T++ ++REA ++L + QQ K
Sbjct: 408 AAFDQRMKTWQRWQDAQATLQ-----------------KKREAEARLLWANKPDKLQQAK 450
Query: 391 SKNLEGREFVKNAWADIE-----------RFKEQKNRDLKEALISY 425
+ LE V D E RF+++K++D K +I Y
Sbjct: 451 DEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKY 496
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 103 LWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFL 162
++RRY+EF+ L + L +P + + +P KR + DN DPDF+++RR GL F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALK-IPAKR-------IFGDNFDPDFIKQRRAGLNEFI 98
Query: 163 LRIASHPIL 171
+ +P L
Sbjct: 99 QNLVRYPEL 107
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 103 LWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFL 162
++RRY+EF+ L + L +P + + +P KR + DN DPDF+++RR GL F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALK-IPAKR-------IFGDNFDPDFIKQRRAGLNEFI 98
Query: 163 LRIASHPIL 171
+ +P L
Sbjct: 99 QNLVRYPEL 107
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 103 LWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFL 162
++RRY+EF+ L + L +P + + +P KR + DN DPDF+++RR GL F+
Sbjct: 47 VFRRYAEFDKLYNTLKKQFPAMALK-IPAKR-------IFGDNFDPDFIKQRRAGLNEFI 98
Query: 163 LRIASHPIL 171
+ +P L
Sbjct: 99 QNLVRYPEL 107
>gi|23397574 sorting nexin 33 [Homo sapiens]
Length = 574
Score = 45.1 bits (105), Expect = 1e-04
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 103 LWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFL 162
++RRY F+ L + LL + I VP LPEK+A + DF+E+R+ L ++
Sbjct: 263 VYRRYKHFDWLYNRLLHKFTVISVPHLPEKQA--------TGRFEEDFIEKRKRRLILWM 314
Query: 163 LRIASHPILCRDKIFYLFLT--QEGNWK 188
+ SHP+L + + F FL+ + WK
Sbjct: 315 DHMTSHPVLSQYEGFQHFLSCLDDKQWK 342
>gi|23111026 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 43.5 bits (101), Expect = 4e-04
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 92 HTDGQSVL--TDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPD 149
HT+ ++ T + RRY EF LR L + VP LP K F +
Sbjct: 43 HTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFF--------GTSDE 94
Query: 150 FVERRRIGLENFLLRIASHPILCRDKIFYLFLTQE 184
F+E+RR GL++FL ++ +L D +LFL +
Sbjct: 95 FIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111028 sorting nexin 11 [Homo sapiens]
Length = 270
Score = 43.5 bits (101), Expect = 4e-04
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 92 HTDGQSVL--TDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPD 149
HT+ ++ T + RRY EF LR L + VP LP K F +
Sbjct: 43 HTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFF--------GTSDE 94
Query: 150 FVERRRIGLENFLLRIASHPILCRDKIFYLFLTQE 184
F+E+RR GL++FL ++ +L D +LFL +
Sbjct: 95 FIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQ 129
>gi|23111041 sorting nexin 3 isoform b [Homo sapiens]
Length = 130
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 124 IVVPPLPEKRAEFVWHKLSADNM-DPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLT 182
+VVPPLP K D + D +F+E R+ GLE F+ ++A HP+ ++ ++FL
Sbjct: 55 VVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQ 114
Query: 183 QE 184
E
Sbjct: 115 DE 116
>gi|23111023 sorting nexin 10 [Homo sapiens]
Length = 201
Score = 42.7 bits (99), Expect = 7e-04
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 92 HTDGQ--SVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDP- 148
HT+ ++ T + RRY EF LR L + +P LP K F NM+
Sbjct: 37 HTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFF--------NMNNR 88
Query: 149 DFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKE----TVNETGFQL-KADSR 203
V++RR GLE+FL ++ + +L D +LFL N ++ +T + + +A +
Sbjct: 89 QHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHK 148
Query: 204 LKALNATFRVKNPD-KRFTDLKHYSDELQSVISH 236
+N F ++ + K+ D+ + S+ S + H
Sbjct: 149 FALMNRRFPEEDEEGKKENDIDYDSESSSSGLGH 182
>gi|23238244 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 0.001
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 70 GRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPL 129
G M + +T Y I V+ T +S + ++RRY++F L L +P + L
Sbjct: 114 GYEVMEERAKFTVYKI---LVKKTPEESWV---VFRRYTDFSRLNDKLKEMFPGFRLA-L 166
Query: 130 PEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASH----------PILCRDKIFYL 179
P KR W K DN + DF+E R++GL+ FL + +H LC D
Sbjct: 167 PPKR----WFK---DNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGP 219
Query: 180 F--LTQEGNWKETVNETGFQLKAD 201
F L + + ET+ ET ++L+ +
Sbjct: 220 FDSLEESRAFCETLEETNYRLQKE 243
>gi|23238246 sorting nexin 16 isoform a [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 0.001
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 70 GRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPL 129
G M + +T Y I V+ T +S + ++RRY++F L L +P + L
Sbjct: 114 GYEVMEERAKFTVYKI---LVKKTPEESWV---VFRRYTDFSRLNDKLKEMFPGFRLA-L 166
Query: 130 PEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIASH----------PILCRDKIFYL 179
P KR W K DN + DF+E R++GL+ FL + +H LC D
Sbjct: 167 PPKR----WFK---DNYNADFLEDRQLGLQAFLQNLVAHKDIANCLAVREFLCLDDPPGP 219
Query: 180 F--LTQEGNWKETVNETGFQLKAD 201
F L + + ET+ ET ++L+ +
Sbjct: 220 FDSLEESRAFCETLEETNYRLQKE 243
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 78 ETYTAYLIETRSVEHTDGQSVLTDSLW---RRYSEFELLRSYLLVYYPHIVVPPLPEKRA 134
+++T Y+I + + + ++ W RRYS+F+LL + L + + +PP
Sbjct: 31 QSHTEYIIRVQ-------RGISVENSWQIVRRYSDFDLLNNSLQIAGLSLPLPP------ 77
Query: 135 EFVWHKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNET 194
K NMD +F+ R+ GL+N+L I ++ IL ++ FL N+ E
Sbjct: 78 -----KKLIGNMDREFIAERQKGLQNYLNVITTNHILSNCELVKKFL-DPNNYSANYTEI 131
Query: 195 GFQ 197
Q
Sbjct: 132 ALQ 134
>gi|7706706 sorting nexin 9 [Homo sapiens]
Length = 595
Score = 40.8 bits (94), Expect = 0.003
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 36/221 (16%)
Query: 102 SLWRRYSEFELLRSYLLVYYPHIV-VPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLEN 160
S+ RY F+ L LLV + + +P LP+K+ + +F++ R L+
Sbjct: 282 SVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQV--------TGRFEEEFIKMRMERLQA 333
Query: 161 FLLRIASHPILCRDKIFYLFLT--QEGNWKETVNETGFQLKADSRLKALNATFRVKNPDK 218
++ R+ HP++ ++F FL E WK TG + KA+ A F P+
Sbjct: 334 WMTRMCRHPVISESEVFQQFLNFRDEKEWK-----TG-KRKAERDELAGVMIFSTMEPEA 387
Query: 219 RFTDLKHYSDELQSV----------ISHLLRVRARVADRLYG-VYKVHGNYGRVFSEWSA 267
DL + ++V + LL V R G + K + G+ +
Sbjct: 388 PDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLAT 447
Query: 268 I--------EKEMGDGLQSAGHHMDVYASSIDDILEDEEHY 300
+ E ++ D + AG + AS + + + + H+
Sbjct: 448 VFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHF 488
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 105 RRYSEFELLRSYLLVYYPH--IVVPPLPEKRAEFVWHKL--SADNMDPDFVERRRIGLEN 160
RR+S+F L L + +VPP PEK + D+ +F+E+RR LE
Sbjct: 185 RRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALER 244
Query: 161 FLLRIASHPILCRDKIFYLFLTQE 184
+L RI +HP + +D FL +E
Sbjct: 245 YLQRIVNHPTMLQDPDVREFLEKE 268
>gi|38708169 sorting nexin 25 [Homo sapiens]
Length = 840
Score = 39.3 bits (90), Expect = 0.007
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 48 MTHNNFWLKKIEISVSEAEKRTGRNAMNMQETYTAYLIETRSVEHTDGQSVLTDSLWRRY 107
M ++W + + + +A +G E Y + S++ G ++ RR
Sbjct: 497 MARTDWWCENL--GMWKASITSGEVTEENGEQLPCYFVMV-SLQEVGGVETKNWTVPRRL 553
Query: 108 SEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRIAS 167
SEF+ L L P + LP KL ++D F+E+ + L FL + S
Sbjct: 554 SEFQNLHRKLSECVPSLKKVQLPSLS------KLPFKSIDQKFMEKSKNQLNKFLQNLLS 607
Query: 168 HPILCRDKIFYLFLTQEGNWKETVNETGFQ--LKADSRLKALNATF--RVKNPDKRFTDL 223
LC+ + Y FL+ ++ + ++ G + S L+ L F + + +DL
Sbjct: 608 DERLCQSEALYAFLSPSPDYLKVIDVQGKKNSFSLSSFLERLPRDFFSHQEEETEEDSDL 667
Query: 224 KHYSDEL 230
Y D++
Sbjct: 668 SDYGDDV 674
>gi|154091028 sorting nexin 29 [Homo sapiens]
Length = 428
Score = 37.0 bits (84), Expect = 0.037
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 102 SLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENF 161
+++RRY+EF L L YP + P K+A N D FVE RR L+N+
Sbjct: 305 NIYRRYTEFRSLHHKLQNKYPQVRAYNFPPKKA--------IGNKDAKFVEERRKQLQNY 356
Query: 162 LLRIASHPI 170
L + + I
Sbjct: 357 LRSVMNKVI 365
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 36.6 bits (83), Expect = 0.048
Identities = 56/291 (19%), Positives = 120/291 (41%), Gaps = 36/291 (12%)
Query: 139 HKLSADNMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNETGFQL 198
HK + +N+ E++ LR A +L + +Q KE V++ Q+
Sbjct: 591 HKQAQENLHDQVQEQKAH------LRAAQDRVLSLETSVNELNSQLNESKEKVSQLDIQI 644
Query: 199 KADSRLKALNATFRVKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNY 258
KA + L L + K + DL+++ D Q+ + D+ + K+
Sbjct: 645 KAKTEL--LLSAEAAKTAQR--ADLQNHLDTAQNALQ----------DKQQELNKITTQL 690
Query: 259 GRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHYADQLKEYLFYAEALRAVC 318
+V ++ ++E L+S H+ Y + + E Q+K+ A++L
Sbjct: 691 DQVTAKLQD-KQEHCSQLES---HLKEYKEKYLSLEQKTEELEGQIKK--LEADSLEVKA 744
Query: 319 RKHELMQ---------YDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPE 369
K + +Q DLE+ A +L+ + + +E+V+ T K + Q+ +
Sbjct: 745 SKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEIVSSTRLDLQKKSEALESIKQKLTK 804
Query: 370 QREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE 420
Q E + ++L++ Q+ K ++ E ++ ++++ K +K + E
Sbjct: 805 QEEEK-QILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEALMTE 854
Score = 31.6 bits (70), Expect = 1.5
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 256 GNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHYADQLKEYLFYAEALR 315
G+ +F + A+ D ++ + + + ++ + LKE +Y+E L+
Sbjct: 51 GSADELFKHYEAVHDAGNDSGHGGESNLALKRDDVTLLRQEVQDLQASLKEEKWYSEELK 110
Query: 316 AVCRKHELMQYD-------LEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETP 368
K++ +Q + ++ +L S +QQ EE T F++K M ++
Sbjct: 111 KELEKYQGLQQQEAKPDGLVTDSSAELQSLEQQLEEAQT---ENFNIKQM------KDLF 161
Query: 369 EQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNR------DLKEAL 422
EQ+ A Q+ +KSK E R + A + R E+ N+ DLK L
Sbjct: 162 EQKAA-------QLATEIADIKSKYDEERSLREAAEQKVTRLTEELNKEATVIQDLKTEL 214
Query: 423 ISY-AVMQISMCKKG-IQVWT 441
+ + +++ KK +QV T
Sbjct: 215 LQRPGIEDVAVLKKELVQVQT 235
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 36.6 bits (83), Expect = 0.048
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 282 HMDVYASSIDDILEDEEHYADQLKEYLFYAEALRAVCRKHELMQYD----LEMAAQDLAS 337
H+ S++ ++ ++ Y + K L R++ R L++ + LE QDLA+
Sbjct: 2531 HLYELLSALQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLIEQEKQRSLEKQRQDLAN 2590
Query: 338 -KKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEG 396
+KQQ + L R + +L +REA + EE++ +G+Q L+ + E
Sbjct: 2591 LQKQQAQYLEEKRRREREWEAREREL------REREALLAQREEEVQQGQQDLEKEREEL 2644
Query: 397 REFVKNAWADIERFK 411
++ D+ER +
Sbjct: 2645 QQKKGTYQYDLERLR 2659
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,806,750
Number of Sequences: 37866
Number of extensions: 732368
Number of successful extensions: 3534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 3280
Number of HSP's gapped (non-prelim): 335
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.