SNRPB2 29482

Name: SNRPB2	Sequence: fasta or formatted (225aa)		NCBI GI: 4507123
Description: small nuclear ribonucleoprotein polypeptide B''		Referenced in: Capping and Splicing
Other entries for this name: alt mRNA [225aa] small nuclear ribonucleoprotein polypeptide B''
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 16 2 C cysteine 0.0 0 0 D aspartate 4.4 10 1 E glutamate 5.3 12 2 F phenylalanine 6.2 14 1 G glycine 6.2 14 1 H histidine 1.8 4 1 I isoleucine 5.8 13 2 K lysine 11.1 25 3 L leucine 6.2 14 1 M methionine 4.4 10 2 N asparagine 7.1 16 2 P proline 6.2 14 2 Q glutamine 5.3 12 1 R arginine 4.0 9 1 S serine 4.4 10 2 T threonine 7.1 16 3 V valine 4.0 9 2 W tryptophan 0.0 0 0 Y tyrosine 3.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide B'' [Homo... SNRPB2 1.000 small nuclear ribonucleoprotein polypeptide B'' [Hom... SNRPA 0.621 small nuclear ribonucleoprotein polypeptide A RNPC3 0.056 RNA-binding region (RNP1, RRM) containing 3 PTBP1 0.053 polypyrimidine tract-binding protein 1 isoform c [Ho... PTBP1 0.053 polypyrimidine tract-binding protein 1 isoform b [Ho... PTBP1 0.053 polypyrimidine tract-binding protein 1 isoform a [Hom... FUSIP1 0.051 FUS interacting protein (serine-arginine rich) 1 isof... LOC653884 0.051 PREDICTED: similar to FUS interacting protein (seri... FUSIP1 0.051 FUS interacting protein (serine-arginine rich) 1 iso... RBM41 0.051 RNA binding motif protein 41 PTBP1 0.049 polypyrimidine tract-binding protein 1 isoform d [Ho... SRrp35 0.049 serine-arginine repressor protein PTBP2 0.049 polypyrimidine tract binding protein 2 SF3B14 0.047 splicing factor 3B, 14 kDa subunit RBM23 0.044 RNA binding motif protein 23 isoform 3 RBM23 0.044 RNA binding motif protein 23 isoform 1 RBM23 0.044 RNA binding motif protein 23 isoform 2 RBMY1F 0.044 RNA binding motif protein, Y-linked, family 1, membe... RBMY1J 0.044 RNA binding motif protein, Y-linked, family 1, membe... RBMY1A1 0.044 RNA binding motif protein, Y-linked, family 1, member... RBMY1E 0.044 RNA binding motif protein, Y-linked, family 1, membe... RBMY1B 0.044 RNA binding motif protein, Y-linked, family 1, membe... RBMY1D 0.044 RNA binding motif protein, Y-linked, family 1, membe... RBM11 0.042 RNA binding motif protein 11 ZCRB1 0.042 zinc finger CCHC-type and RNA binding motif 1 A2BP1 0.042 ataxin 2-binding protein 1 isoform 4 A2BP1 0.042 ataxin 2-binding protein 1 isoform 5 A2BP1 0.042 ataxin 2-binding protein 1 isoform 3 A2BP1 0.042 ataxin 2-binding protein 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.