USO1 29079

Name: USO1	Sequence: fasta or formatted (962aa)		NCBI GI: 4505541
Description: USO1 homolog, vesicle docking protein		Referenced in: ADP-Ribosylation Factors ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 50 2 C cysteine 1.7 16 1 D aspartate 4.7 45 2 E glutamate 10.1 97 5 F phenylalanine 2.6 25 2 G glycine 5.1 49 2 H histidine 1.7 16 1 I isoleucine 6.2 60 2 K lysine 6.3 61 2 L leucine 13.1 126 3 M methionine 1.9 18 1 N asparagine 5.3 51 3 P proline 2.7 26 2 Q glutamine 8.7 84 2 R arginine 3.3 32 2 S serine 8.1 78 2 T threonine 5.4 52 2 V valine 5.8 56 2 W tryptophan 0.5 5 1 Y tyrosine 1.6 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 USO1 homolog, vesicle docking protein MYH11 0.028 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.028 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.028 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.028 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC46 0.027 coiled-coil domain containing 46 isoform a MYH9 0.027 myosin, heavy polypeptide 9, non-muscle CLIP1 0.026 restin isoform b CLIP1 0.026 restin isoform a GOLGB1 0.026 golgi autoantigen, golgin subfamily b, macrogolgin ... LOC100133758 0.025 PREDICTED: hypothetical protein, partial MYH10 0.025 myosin, heavy polypeptide 10, non-muscle CROCC 0.025 ciliary rootlet coiled-coil C10orf118 0.025 CTCL tumor antigen L14-2 TPR 0.024 nuclear pore complex-associated protein TPR CENPE 0.024 centromere protein E ROCK2 0.023 Rho-associated, coiled-coil containing protein kinas... MYH13 0.023 myosin, heavy polypeptide 13, skeletal muscle [Homo... CEP110 0.023 centrosomal protein 110kDa CCDC88A 0.023 coiled-coil domain containing 88A isoform 2 CENPF 0.023 centromere protein F PPL 0.023 periplakin FILIP1 0.022 filamin A interacting protein 1 ERC1 0.022 RAB6-interacting protein 2 isoform epsilon ERC1 0.022 RAB6-interacting protein 2 isoform delta RAD50 0.022 RAD50 homolog isoform 2 RAD50 0.022 RAD50 homolog isoform 1 GOLGA4 0.022 golgi autoantigen, golgin subfamily a, 4 MYH3 0.022 myosin, heavy chain 3, skeletal muscle, embryonic [H... HOOK3 0.022 golgi-associated microtubule-binding protein HOOK3 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.