OPHN1 29071

Name: OPHN1	Sequence: fasta or formatted (802aa)		NCBI GI: 4505507
Description: oligophrenin 1		Referenced in: Rho and Rac
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 34 2 C cysteine 1.4 11 1 D aspartate 4.9 39 2 E glutamate 9.0 72 2 F phenylalanine 4.5 36 2 G glycine 4.9 39 2 H histidine 2.5 20 2 I isoleucine 5.7 46 2 K lysine 8.4 67 3 L leucine 8.7 70 2 M methionine 2.5 20 3 N asparagine 3.9 31 1 P proline 7.9 63 3 Q glutamine 4.6 37 2 R arginine 5.9 47 2 S serine 7.2 58 2 T threonine 6.2 50 1 V valine 4.6 37 2 W tryptophan 0.5 4 1 Y tyrosine 2.6 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 oligophrenin 1 FLJ32810 0.455 Rho-type GTPase-activating protein FLJ32810 ARHGAP26 0.390 GTPase regulator associated with the focal adhesion... ARHGAP26 0.390 GTPase regulator associated with the focal adhesion k... ARHGAP10 0.377 Rho GTPase activating protein 10 ARHGAP15 0.064 ARHGAP15 CHN2 0.061 beta chimerin isoform 2 CHN2 0.061 beta chimerin isoform 1 CHN1 0.059 chimerin (chimaerin) 1 isoform a CHN1 0.059 chimerin (chimaerin) 1 isoform b ARHGAP12 0.054 Rho GTPase activating protein 12 ARHGAP27 0.054 Rho GTPase activating protein 27 isoform b ARHGAP27 0.054 Rho GTPase activating protein 27 isoform a GRLF1 0.054 glucocorticoid receptor DNA binding factor 1 HMHA1 0.053 minor histocompatibility antigen HA-1 ARHGAP23 0.053 Rho GTPase activating protein 23 ACAP3 0.051 ArfGAP with coiled-coil, ankyrin repeat and PH doma... ARHGAP21 0.051 Rho GTPase activating protein 21 ARHGAP17 0.049 nadrin isoform 2 ARHGAP9 0.048 Rho GTPase activating protein 9 isoform 1 ARHGAP9 0.048 Rho GTPase activating protein 9 isoform 3 ARHGAP17 0.047 nadrin isoform 1 GMIP 0.046 GEM interacting protein RICH2 0.046 Rho GTPase-activating protein RICH2 ARHGAP5 0.045 Rho GTPase activating protein 5 isoform a ARHGAP5 0.045 Rho GTPase activating protein 5 isoform b CDGAP 0.044 Cdc42 GTPase-activating protein SRGAP2 0.043 SLIT-ROBO Rho GTPase activating protein 2 isoform a... SRGAP2 0.043 SLIT-ROBO Rho GTPase activating protein 2 isoform b... SNX26 0.043 sorting nexin 26 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.