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Search of human proteins with 13027612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13027612 RAS-like family 11 member B [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13027612 RAS-like family 11 member B [Homo sapiens] 492 e-139
gi|45592963 RAS-like, family 11, member A [Homo sapiens] 239 2e-63
gi|14249704 RAS-like, estrogen-regulated, growth inhibitor [Homo... 120 1e-27
gi|5902050 Ras-like without CAAX 1 [Homo sapiens] 104 6e-23
gi|145386506 muscle RAS oncogene homolog [Homo sapiens] 100 1e-21
gi|145386562 muscle RAS oncogene homolog [Homo sapiens] 100 1e-21
gi|7706095 RAS-like, family 12 protein [Homo sapiens] 98 6e-21
gi|4506533 Ras-like without CAAX 2 [Homo sapiens] 97 2e-20
gi|21361416 related RAS viral (r-ras) oncogene homolog 2 isoform... 96 4e-20
gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens] 92 3e-19
gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens] 91 7e-19
gi|194363762 v-Ha-ras Harvey rat sarcoma viral oncogene homolog ... 89 3e-18
gi|4885425 v-Ha-ras Harvey rat sarcoma viral oncogene homolog is... 89 3e-18
gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens] 87 2e-17
gi|4505451 neuroblastoma RAS viral (v-ras) oncogene homolog [Hom... 86 4e-17
gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens] 82 3e-16
gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens] 82 3e-16
gi|13376046 RERG/RAS-like [Homo sapiens] 82 4e-16
gi|34222246 v-Ha-ras Harvey rat sarcoma viral oncogene homolog i... 81 7e-16
gi|4506405 v-ral simian leukemia viral oncogene homolog B [Homo ... 81 7e-16
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 81 7e-16
gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens] 81 1e-15
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens] 80 2e-15
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 79 4e-15
gi|33946329 ras related v-ral simian leukemia viral oncogene hom... 78 6e-15
gi|5454028 related RAS viral (r-ras) oncogene homolog [Homo sapi... 77 2e-14
gi|21389385 Ras homolog enriched in brain like 1 [Homo sapiens] 76 2e-14
gi|34485714 Ras-related protein Rab-23 [Homo sapiens] 76 2e-14
gi|34485716 Ras-related protein Rab-23 [Homo sapiens] 76 2e-14
gi|32483371 GTP-binding mitogen-induced T-cell protein [Homo sap... 76 2e-14
>gi|13027612 RAS-like family 11 member B [Homo sapiens]
Length = 248
Score = 492 bits (1266), Expect = e-139
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIG 60
MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIG
Sbjct: 1 MRLIQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIG 60
Query: 61 DYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSI 120
DYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSI
Sbjct: 61 DYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSI 120
Query: 121 TDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYE 180
TDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYE
Sbjct: 121 TDYKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYE 180
Query: 181 VSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSA 240
VSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSA
Sbjct: 181 VSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSA 240
Query: 241 KVRTVTSV 248
KVRTVTSV
Sbjct: 241 KVRTVTSV 248
>gi|45592963 RAS-like, family 11, member A [Homo sapiens]
Length = 242
Score = 239 bits (610), Expect = 2e-63
Identities = 117/216 (54%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPG-IQ 92
+K+AV+GA VGK+A++VRFLTKRFIGDYE N G LY+R V +EG+ L+LQ+QDTPG +Q
Sbjct: 28 IKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQDTPGGVQ 87
Query: 93 VHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVAN 152
+ ++ + L++C++WA+ ++V+SITDY SY I L+QH++++H ++ PV++V N
Sbjct: 88 IQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIRKVHPDSKAPVIIVGN 147
Query: 153 KADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPE 212
K DLLH +QV Q G+QLA+ LG F E+S SENY DV F LCKEVS S E
Sbjct: 148 KGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHLCKEVSKMHGLSG--E 205
Query: 213 KRRTSLIPRPKSPNMQDLKRRFKQALSAKVRTVTSV 248
+RR S+IPRP+SPNMQDLKRRFKQALS KV+ +++
Sbjct: 206 RRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSAL 241
>gi|14249704 RAS-like, estrogen-regulated, growth inhibitor [Homo
sapiens]
Length = 199
Score = 120 bits (300), Expect = 1e-27
Identities = 64/184 (34%), Positives = 107/184 (58%), Gaps = 7/184 (3%)
Query: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQV 93
VK+A+ G +GVGK+ALVVRFLTKRFI +Y+ + Y Q I+ E +++++ DT G
Sbjct: 7 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAG--- 63
Query: 94 HENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANK 153
E+++ Q +RW + V+V+ ITD S+E + L + ++ + +++V NK
Sbjct: 64 QEDTI----QREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNK 119
Query: 154 ADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEK 213
ADL H +QV + G +LA+ L C+FYE S ++ F+ LC+EV ++ +
Sbjct: 120 ADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMVQGKTRR 179
Query: 214 RRTS 217
R ++
Sbjct: 180 RSST 183
>gi|5902050 Ras-like without CAAX 1 [Homo sapiens]
Length = 219
Score = 104 bits (260), Expect = 6e-23
Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 17 GNAAASDCCVGAAG-RRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQ 75
G CC AG R K+ ++GA GVGK+A+ ++F++ RF D++ + Y +++
Sbjct: 4 GTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIR 63
Query: 76 IEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQH 135
I+ E L + DT G + ++ +R + +I +SITD +S+ + + Q
Sbjct: 64 IDDEPANLDILDTAG------QAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQL 117
Query: 136 VQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFH 195
+ ++ PVV+V NK+DL ++QV + GL LA C F+E S + Y + FH
Sbjct: 118 IYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY-IDDVFH 176
Query: 196 VLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQ 236
L +E+ K++ + ++++ +PK+ + LK F++
Sbjct: 177 ALVREIRRKEKEAVLAMEKKS----KPKNSVWKRLKSPFRK 213
>gi|145386506 muscle RAS oncogene homolog [Homo sapiens]
Length = 208
Score = 100 bits (249), Expect = 1e-21
Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVG GVGK+AL ++F K F+ DY+ + Y + +I+ + L V DT G
Sbjct: 15 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG---Q 71
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
E + EQ +R D +IV+S+TD S+E + + HQ + ++ P+++VANK
Sbjct: 72 EEFSAMREQY---MRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKV 128
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKR 214
DL+H++++ + G ++A+ + E S + +V AFH L + + + S +K+
Sbjct: 129 DLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKK 188
Query: 215 RT 216
+T
Sbjct: 189 KT 190
>gi|145386562 muscle RAS oncogene homolog [Homo sapiens]
Length = 208
Score = 100 bits (249), Expect = 1e-21
Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVG GVGK+AL ++F K F+ DY+ + Y + +I+ + L V DT G
Sbjct: 15 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG---Q 71
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
E + EQ +R D +IV+S+TD S+E + + HQ + ++ P+++VANK
Sbjct: 72 EEFSAMREQY---MRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKV 128
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKR 214
DL+H++++ + G ++A+ + E S + +V AFH L + + + S +K+
Sbjct: 129 DLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKK 188
Query: 215 RT 216
+T
Sbjct: 189 KT 190
>gi|7706095 RAS-like, family 12 protein [Homo sapiens]
Length = 266
Score = 98.2 bits (243), Expect = 6e-21
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQV 93
V +A++G G GK+AL V+FLTKRFI +Y+ N + Y+ + ++ + + L+V DT +
Sbjct: 21 VNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLDT 80
Query: 94 HENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQ----LHQHVQQLHLGTRLPVVV 149
N C LN WA A ++V+S+ +S++ S L H ++ +P ++
Sbjct: 81 PRN---CERYLN----WAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQ--RSIPALL 131
Query: 150 VANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPS 208
+ NK D+ +QV G+ LA GC F+EVS ++ V FH +E + + S
Sbjct: 132 LGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARRELEKS 190
>gi|4506533 Ras-like without CAAX 2 [Homo sapiens]
Length = 217
Score = 96.7 bits (239), Expect = 2e-20
Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 22 SDCCVGAA--GRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGE 79
+ C G+A G R K+ ++GA GVGK+A+ ++F++ +F ++ + Y QV+I+ E
Sbjct: 7 ASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFISHQFPDYHDPTIEDAYKTQVRIDNE 66
Query: 80 TLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQL 139
L + DT G + + +R + +I +S+TD +S++ ++ + + Q+
Sbjct: 67 PAYLDILDTAG------QAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQV 120
Query: 140 HLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCK 199
+P+V+V NK DL +QV + GL LA C F+E S + + + AFH L +
Sbjct: 121 RHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFETSAALRF-CIDDAFHGLVR 179
Query: 200 EVSHKQQPSSTPEKR 214
E+ K+ S EK+
Sbjct: 180 EIRKKESMPSLMEKK 194
>gi|21361416 related RAS viral (r-ras) oncogene homolog 2 isoform a
[Homo sapiens]
Length = 204
Score = 95.5 bits (236), Expect = 4e-20
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 29 AGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDT 88
+G+ ++ VVG GVGK+AL ++F+ F+ DY+ + YT+Q I+ L + DT
Sbjct: 10 SGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDT 69
Query: 89 PGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVV 148
G E + EQ +R + ++VFS+TD S+E I + + + ++ P++
Sbjct: 70 AG---QEEFGAMREQY---MRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMI 123
Query: 149 VVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPS 208
++ NKADL H +QV + G QLA L ++ E S N V AFH L + + Q+
Sbjct: 124 LIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMN-VDQAFHELVRVIRKFQEQE 182
Query: 209 STPEKRRT 216
P T
Sbjct: 183 CPPSPEPT 190
>gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens]
Length = 298
Score = 92.4 bits (228), Expect = 3e-19
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 12/229 (5%)
Query: 14 PAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQ 73
PAP + ++ + L ++ ++G GVGKT+L F K+ +E+ ++Y R
Sbjct: 61 PAPDDWSSESSDSEGSWEALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERT 120
Query: 74 VQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLH 133
+ ++GE L V DT + + S S C++ A VIV+SI D S+E S+L
Sbjct: 121 LTVDGEDTTLVVVDTWEAEKLDKSWSQES----CLQGGSAYVIVYSIADRGSFESASELR 176
Query: 134 QHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSA 193
+++ H +P+++V NKADL ++V + G A + C F E S + +N V
Sbjct: 177 IQLRRTHQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHN-VAEL 235
Query: 194 FHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSP-NMQDLKRRFKQALSAK 241
F + +++ +++ S+ E P P+ P ++ RRF L+A+
Sbjct: 236 FEGVVRQLRLRRRDSAAKEP------PAPRRPASLAQRARRFLARLTAR 278
>gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens]
Length = 188
Score = 91.3 bits (225), Expect = 7e-19
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+E I + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEV-SHKQQPSSTPEK 213
D L + VD + LA G F E S ++ V AF+ L +E+ HK++ S +K
Sbjct: 119 D-LPSRTVDTKQAQDLARSYGIPFIETS-AKTRQGVDDAFYTLVREIRKHKEKMSKDGKK 176
Query: 214 RR 215
++
Sbjct: 177 KK 178
>gi|194363762 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 1 [Homo sapiens]
Length = 189
Score = 89.4 bits (220), Expect = 3e-18
Identities = 55/180 (30%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+E I Q + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEV-SHKQQPSSTPEK 213
DL + V+ + LA G + E S ++ V AF+ L +E+ HK + + P++
Sbjct: 119 DLA-ARTVESRQAQDLARSYGIPYIETS-AKTRQGVEDAFYTLVREIRQHKLRKLNPPDE 176
>gi|4885425 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 1 [Homo sapiens]
Length = 189
Score = 89.4 bits (220), Expect = 3e-18
Identities = 55/180 (30%), Positives = 98/180 (54%), Gaps = 9/180 (5%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+E I Q + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEV-SHKQQPSSTPEK 213
DL + V+ + LA G + E S ++ V AF+ L +E+ HK + + P++
Sbjct: 119 DLA-ARTVESRQAQDLARSYGIPYIETS-AKTRQGVEDAFYTLVREIRQHKLRKLNPPDE 176
>gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens]
Length = 189
Score = 86.7 bits (213), Expect = 2e-17
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+E I + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTPEKR 214
D L + VD + LA G F E S ++ V AF+ L +E+ + + E++
Sbjct: 119 D-LPSRTVDTKQAQDLARSYGIPFIETS-AKTRQRVEDAFYTLVREIRQYRLKKISKEEK 176
>gi|4505451 neuroblastoma RAS viral (v-ras) oncogene homolog [Homo
sapiens]
Length = 189
Score = 85.5 bits (210), Expect = 4e-17
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+ I+ + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEV 201
D L + VD + +LA G F E S ++ V AF+ L +E+
Sbjct: 119 D-LPTRTVDTKQAHELAKSYGIPFIETS-AKTRQGVEDAFYTLVREI 163
>gi|10518344 RAP2A, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 82.4 bits (202), Expect = 3e-16
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 32 RLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGI 91
R K+ V+G+ GVGK+AL V+F+T FI Y+ + Y ++++++ L++ DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
+ + + I+ ++V+S+ + +S++ I + + ++ ++PV++V
Sbjct: 62 E------QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVG 115
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQP 207
NK DL ++V G LA GC F E S +++ V F + +++++ QP
Sbjct: 116 NKVDLESEREVSSSEGRALAEEWGCPFMETS-AKSKTMVDELFAEIVRQMNYAAQP 170
>gi|32129209 RAP2C, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 82.4 bits (202), Expect = 3e-16
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 32 RLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGI 91
R K+ V+G+ GVGK+AL V+F+T FI Y+ + Y ++++++ L++ DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
+ + + I+ ++V+S+ + +S++ I + + ++ ++P+++V
Sbjct: 62 E------QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVG 115
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTP 211
NK DL ++V G LA GC F E S S L E+ + SS P
Sbjct: 116 NKVDLEPEREVMSSEGRALAQEWGCPFMETSAKSK-----SMVDELFAEIVRQMNYSSLP 170
Query: 212 EKR 214
EK+
Sbjct: 171 EKQ 173
>gi|13376046 RERG/RAS-like [Homo sapiens]
Length = 205
Score = 82.0 bits (201), Expect = 4e-16
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 48 ALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRC 107
AL VRFLTKRFIG+Y N ++Y + + +E + L L++ D P Q + S + +L+
Sbjct: 19 ALTVRFLTKRFIGEYASNFESIYKKHLCLERKQLNLEIYD-PCSQTQKAKFSLTSELH-- 75
Query: 108 IRWADAVVIVFSITDYKSYELISQLHQHVQQ-----LHLGTRLPVVVVANKADLLHIKQV 162
WAD VIV+ I+D S+ L +++ V +V NK DL H+++V
Sbjct: 76 --WADGFVIVYDISDRSSFAFAKALIYRIREPQTSHCKRAVESAVFLVGNKRDLCHVREV 133
Query: 163 DPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEV------SHKQQPSST 210
+ G +LA C F E+S +E +V F + K++ K++PS +
Sbjct: 134 GWEEGQKLALENRCQFCELSAAEQSLEVEMMFIRIIKDILINFKLKEKRRPSGS 187
>gi|34222246 v-Ha-ras Harvey rat sarcoma viral oncogene homolog
isoform 2 [Homo sapiens]
Length = 170
Score = 81.3 bits (199), Expect = 7e-16
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVGA GVGK+AL ++ + F+ +Y+ + Y +QV I+GET L + DT G + +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
S ++ +R + + VF+I + KS+E I Q + ++++ +P+V+V NK
Sbjct: 65 ------SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKC 118
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVS 182
DL + V+ + LA G + E S
Sbjct: 119 DLA-ARTVESRQAQDLARSYGIPYIETS 145
>gi|4506405 v-ral simian leukemia viral oncogene homolog B [Homo
sapiens]
Length = 206
Score = 81.3 bits (199), Expect = 7e-16
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 27 GAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQ 86
G + L K+ +VG+ GVGK+AL ++F+ F+ DYE + Y ++V ++GE + + +
Sbjct: 8 GQSSLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDIL 67
Query: 87 DTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHL-GTRL 145
DT G + + + + R + ++VFSIT+++S+ ++ + + ++ ++
Sbjct: 68 DTAGQEDY------AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKI 121
Query: 146 PVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQ 205
P++VV NK+DL +QV + A G + E S N V F L +E+ K+
Sbjct: 122 PLLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRAN-VDKVFFDLMREIRTKK 180
Query: 206 QPSSTPEKRRTSLIPRPKSPNMQDLKRR 233
+ + + S S N + K R
Sbjct: 181 MSENKDKNGKKS------SKNKKSFKER 202
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 81.3 bits (199), Expect = 7e-16
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 33 LVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAG-NLYTRQVQIEGETLALQVQDTPGI 91
L K+ ++G SGVGK+ L++RF + Y G + R ++++G+T+ LQ+ DT G
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG- 66
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
Q +++ S R A +++V+ +TD +SY + Q Q + + + + ++V
Sbjct: 67 QERFRTITSS-----YYRGAHGIIVVYDVTDQESYANVKQWLQEIDR-YASENVNKLLVG 120
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTP 211
NK+DL K VD + A LG F E S ++N +V AF + E+ + P +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETS-AKNATNVEQAFMTMAAEIKKRMGPGAAS 179
Query: 212 EKRRTSL 218
R +L
Sbjct: 180 GGERPNL 186
>gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 80.9 bits (198), Expect = 1e-15
Identities = 46/177 (25%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 32 RLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGI 91
R K+ V+G+ GVGK+AL V+F+T FI Y+ + Y ++++++ L++ DT G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
+ + + I+ ++V+S+ + +S++ I + + ++ R+P+++V
Sbjct: 62 E------QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVG 115
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPS 208
NK DL ++V G LA C F E S ++N V F + +++++ QP+
Sbjct: 116 NKVDLEGEREVSYGEGKALAEEWSCPFMETS-AKNKASVDELFAEIVRQMNYAAQPN 171
>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
Length = 229
Score = 79.7 bits (195), Expect = 2e-15
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 11 AEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAG-NL 69
A + + G + + + A R+ KI V+G S VGKT L RF RF E G +
Sbjct: 11 ASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDF 70
Query: 70 YTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELI 129
R V+I+GE + +Q+ DT G + S+ + R AVV V+ +T+ S+ +
Sbjct: 71 RERAVEIDGERIKIQLWDTAGQERFRKSM-----VQHYYRNVHAVVFVYDMTNMASFHSL 125
Query: 130 SQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYND 189
+ +Q L +P ++V NK DL QV L + A +E S ++N ND
Sbjct: 126 PSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETS-AKNPND 184
Query: 190 ---VYSAFHVLCKEV-SHKQQPSSTPEKRRTSLIPRPK 223
V + F L ++ SHK S P L P PK
Sbjct: 185 NDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPK 222
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 79.0 bits (193), Expect = 4e-15
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 33 LVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAG-NLYTRQVQIEGETLALQVQDTPGI 91
L K+ ++G SGVGK+ L++RF + Y G + R ++++G+T+ LQ+ DT G
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG- 69
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
Q +++ S R A +++V+ +TD +S+ + Q Q + + + + ++V
Sbjct: 70 QERFRTITSS-----YYRGAHGIIVVYDVTDQESFNNVKQWLQEIDR-YASENVNKLLVG 123
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSSTP 211
NK DL K VD + A LG F E S ++N +V +F + E+ + P +T
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETS-AKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 212 EKRRTSLIPRPKSPNMQ 228
S + +P Q
Sbjct: 183 GGAEKSNVKIQSTPVKQ 199
>gi|33946329 ras related v-ral simian leukemia viral oncogene
homolog A [Homo sapiens]
Length = 206
Score = 78.2 bits (191), Expect = 6e-15
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 33 LVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQ 92
L K+ +VG+ GVGK+AL ++F+ F+ DYE + Y ++V ++GE + + + DT G +
Sbjct: 14 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQE 73
Query: 93 VHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVAN 152
+ + + R + + VFSIT+ +S+ + + + ++ +P ++V N
Sbjct: 74 DY------AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGN 127
Query: 153 KADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQPSS--- 209
K+DL +QV + A ++ E S N V F L +E+ ++ S
Sbjct: 128 KSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRAN-VDKVFFDLMREIRARKMEDSKEK 186
Query: 210 TPEKRRTSLIPR 221
+K+R SL R
Sbjct: 187 NGKKKRKSLAKR 198
>gi|5454028 related RAS viral (r-ras) oncogene homolog [Homo
sapiens]
Length = 218
Score = 76.6 bits (187), Expect = 2e-14
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 35 KIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVH 94
K+ VVG GVGK+AL ++F+ F+ DY+ + YT+ ++G L + DT G
Sbjct: 31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAG---Q 87
Query: 95 ENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVANKA 154
E + EQ +R ++VF+I D +S+ + +L + ++ PVV+V NKA
Sbjct: 88 EEFGAMREQY---MRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKA 144
Query: 155 DLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQ------PS 208
DL +QV + +++E S N V AF L + V Q+ P
Sbjct: 145 DLESQRQVPRSEASAFGASHHVAYFEASAKLRLN-VDEAFEQLVRAVRKYQEQELPPSPP 203
Query: 209 STPEKR 214
S P K+
Sbjct: 204 SAPRKK 209
>gi|21389385 Ras homolog enriched in brain like 1 [Homo sapiens]
Length = 183
Score = 76.3 bits (186), Expect = 2e-14
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 32 RLVKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGI 91
R K+ ++G VGKT+L +F+ F Y+ N Y++ V + + L + DT G
Sbjct: 5 RYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAG- 63
Query: 92 QVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVA 151
Q + L S I V+V+S+T S+++I L+Q + + H TR+PVV+V
Sbjct: 64 QDEYSILPYS-----FIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVG 118
Query: 152 NKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSEN 186
NKADL ++V G +LA G +F E S EN
Sbjct: 119 NKADLSPEREVQAVEGKKLAESWGATFMESSAREN 153
>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
Length = 237
Score = 76.3 bits (186), Expect = 2e-14
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAG-NLYTRQVQIEGETLALQVQDTPGIQ 92
+K+ VVG VGK++++ R+ F DY++ G + RQ+Q+ E + L + DT G +
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 93 VHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVAN 152
+ R A A V+VFS TD +S+E +S + V +G +P V+V N
Sbjct: 70 EFDAITKAY------YRGAQACVLVFSTTDRESFEAVSSWREKVVA-EVGD-IPTVLVQN 121
Query: 153 KADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSH--KQQPSST 210
K DLL + + LA L FY SV E+ N V F L ++ KQQ +
Sbjct: 122 KIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLN-VNEVFKYLAEKYLQKLKQQIAED 180
Query: 211 PEKRRTS 217
PE +S
Sbjct: 181 PELTHSS 187
>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
Length = 237
Score = 76.3 bits (186), Expect = 2e-14
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAG-NLYTRQVQIEGETLALQVQDTPGIQ 92
+K+ VVG VGK++++ R+ F DY++ G + RQ+Q+ E + L + DT G +
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 93 VHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLPVVVVAN 152
+ R A A V+VFS TD +S+E +S + V +G +P V+V N
Sbjct: 70 EFDAITKAY------YRGAQACVLVFSTTDRESFEAVSSWREKVVA-EVGD-IPTVLVQN 121
Query: 153 KADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSH--KQQPSST 210
K DLL + + LA L FY SV E+ N V F L ++ KQQ +
Sbjct: 122 KIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLN-VNEVFKYLAEKYLQKLKQQIAED 180
Query: 211 PEKRRTS 217
PE +S
Sbjct: 181 PELTHSS 187
>gi|32483371 GTP-binding mitogen-induced T-cell protein [Homo
sapiens]
Length = 296
Score = 76.3 bits (186), Expect = 2e-14
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 29 AGRRLVKIAVVGASGVGKTALVVRF--LTKRFIGDYERNAGNLYTRQVQIEGETLALQVQ 86
+G ++ ++G GVGK+ L F + D E + Y R + ++GE+ + +
Sbjct: 71 SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 130
Query: 87 DTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLP 146
D + EN + C++ DA +IV+SITD S+E S+L +++ +P
Sbjct: 131 D-----MWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIP 185
Query: 147 VVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVLCKEVSHKQQ 206
+++V NK+DL+ ++V G A + C F E S + +N V F + ++V ++
Sbjct: 186 IILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHN-VKELFEGIVRQVRLRR- 243
Query: 207 PSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAK 241
+ EK L + + +M RRF + AK
Sbjct: 244 --DSKEKNERRLAYQKRKESMPRKARRFWGKIVAK 276
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,726,948
Number of Sequences: 37866
Number of extensions: 350266
Number of successful extensions: 1579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1271
Number of HSP's gapped (non-prelim): 225
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.